RNA–Protein interactions for RNA: ENST00000506767.1

TCOF1-210, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 5

Gene TCOF1, Length 869 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-210ENST00000506767 PPP1R16AQ96I34 528 aa12.98□□□□□ -0.33
TCOF1-210ENST00000506767 SPATA13Q96N96 652 aa12.98□□□□□ -0.33
TCOF1-210ENST00000506767 KLHL32Q96NJ5 620 aa12.98□□□□□ -0.33
TCOF1-210ENST00000506767 FCRL5Q96RD9 977 aa12.98□□□□□ -0.33
TCOF1-210ENST00000506767 AP1M1Q9BXS5 423 aa12.98□□□□□ -0.33
TCOF1-210ENST00000506767 HDAC8Q9BY41 377 aa12.98□□□□□ -0.33
TCOF1-210ENST00000506767 NEUROG2Q9H2A3 272 aa12.98□□□□□ -0.33
TCOF1-210ENST00000506767 ATP13A3Q9H7F0 1226 aa12.98□□□□□ -0.33
TCOF1-210ENST00000506767 FAM86C1Q9NVL1 165 aa12.98□□□□□ -0.33
TCOF1-210ENST00000506767 FBXL12Q9NXK8 326 aa12.98□□□□□ -0.33
TCOF1-210ENST00000506767 WSB2Q9NYS7 404 aaPredicted RBP12.98□□□□□ -0.33
TCOF1-210ENST00000506767 KLHL8Q9P2G9 620 aaPredicted RBP12.98□□□□□ -0.33
TCOF1-210ENST00000506767 FZD4Q9ULV1 537 aa12.98□□□□□ -0.33
TCOF1-210ENST00000506767 ZNF148Q9UQR1 794 aa12.98□□□□□ -0.33
TCOF1-210ENST00000506767 PCDHGA2Q9Y5H1 932 aa12.98□□□□□ -0.33
TCOF1-210ENST00000506767 FANCMQ8IYD8 2048 aa12.98□□□□□ -0.33
TCOF1-210ENST00000506767 IGHV1OR15-9A0A0B4J2B8 117 aa12.97□□□□□ -0.33
TCOF1-210ENST00000506767 C16orf96A6NNT2 1141 aa12.97□□□□□ -0.33
TCOF1-210ENST00000506767 C10orf142B7Z368 130 aa12.97□□□□□ -0.33
TCOF1-210ENST00000506767 PDE2AO00408 941 aaPredicted RBP12.97□□□□□ -0.33
TCOF1-210ENST00000506767 PLK4O00444 970 aa12.97□□□□□ -0.33
TCOF1-210ENST00000506767 SLC7A4O43246 635 aa12.97□□□□□ -0.33
TCOF1-210ENST00000506767 HRO43593 1189 aa12.97□□□□□ -0.33
TCOF1-210ENST00000506767 FZD6O60353 706 aa12.97□□□□□ -0.33
TCOF1-210ENST00000506767 SOCS5O75159 536 aa12.97□□□□□ -0.33
TCOF1-210ENST00000506767 SERPINF2P08697 491 aa12.97□□□□□ -0.33
TCOF1-210ENST00000506767 NFKB1P19838 968 aa12.97□□□□□ -0.33
TCOF1-210ENST00000506767 SERPINA4P29622 427 aa12.97□□□□□ -0.33
TCOF1-210ENST00000506767 OXTRP30559 389 aa12.97□□□□□ -0.33
TCOF1-210ENST00000506767 CNR2P34972 360 aa12.97□□□□□ -0.33
TCOF1-210ENST00000506767 PTPN5P54829 565 aa12.97□□□□□ -0.33
TCOF1-210ENST00000506767 BCL2L1Q07817 233 aa12.97□□□□□ -0.33
TCOF1-210ENST00000506767 CNTN1Q12860 1018 aa12.97□□□□□ -0.33
TCOF1-210ENST00000506767 TRAF2Q12933 501 aa12.97□□□□□ -0.33
TCOF1-210ENST00000506767 P3H1Q32P28 736 aa12.97□□□□□ -0.33
TCOF1-210ENST00000506767 POM121L1PQ3SYA9 428 aa12.97□□□□□ -0.33
TCOF1-210ENST00000506767 USP39Q53GS9 565 aaKnown RBP12.97□□□□□ -0.33
TCOF1-210ENST00000506767 PIP5KL1Q5T9C9 394 aa12.97□□□□□ -0.33
TCOF1-210ENST00000506767 AGBL4Q5VU57 503 aa12.97□□□□□ -0.33
TCOF1-210ENST00000506767 TTC27Q6P3X3 843 aa12.97□□□□□ -0.33
TCOF1-210ENST00000506767 ERN2Q76MJ5 926 aaKnown RBP12.97□□□□□ -0.33
TCOF1-210ENST00000506767 PARS2Q7L3T8 475 aaKnown RBP12.97□□□□□ -0.33
TCOF1-210ENST00000506767 ZSWIM9Q86XI8 627 aa12.97□□□□□ -0.33
TCOF1-210ENST00000506767 KLHDC8BQ8IXV7 354 aa12.97□□□□□ -0.33
TCOF1-210ENST00000506767 HDDC3Q8N4P3 179 aa12.97□□□□□ -0.33
TCOF1-210ENST00000506767 FAM71DQ8N9W8 422 aa12.97□□□□□ -0.33
TCOF1-210ENST00000506767 CCDC110Q8TBZ0 833 aa12.97□□□□□ -0.33
TCOF1-210ENST00000506767 GAB3Q8WWW8 586 aa12.97□□□□□ -0.33
TCOF1-210ENST00000506767 CAPZA3Q96KX2 299 aa12.97□□□□□ -0.33
TCOF1-210ENST00000506767 OMDQ99983 421 aa12.97□□□□□ -0.33
TCOF1-210ENST00000506767 GORASP1Q9BQQ3 440 aa12.97□□□□□ -0.33
TCOF1-210ENST00000506767 MBD1Q9UIS9 605 aaPredicted RBP12.97□□□□□ -0.33
TCOF1-210ENST00000506767 CYP8B1Q9UNU6 501 aa12.97□□□□□ -0.33
TCOF1-210ENST00000506767 NCKAP1Q9Y2A7 1128 aa12.97□□□□□ -0.33
TCOF1-210ENST00000506767 TTLL3Q9Y4R7 772 aa12.97□□□□□ -0.33
TCOF1-210ENST00000506767 PCDHGC4Q9Y5F7 938 aa12.97□□□□□ -0.33
TCOF1-210ENST00000506767 A0A1W2PQ67 120 aa12.96□□□□□ -0.33
TCOF1-210ENST00000506767 H0Y858 1186 aa12.96□□□□□ -0.33
TCOF1-210ENST00000506767 OPHN1O60890 802 aa12.96□□□□□ -0.33
TCOF1-210ENST00000506767 PHF2O75151 1096 aa12.96□□□□□ -0.33
TCOF1-210ENST00000506767 RNASEH2AO75792 299 aaKnown RBP12.96□□□□□ -0.33
TCOF1-210ENST00000506767 STK10O94804 968 aaKnown RBP12.96□□□□□ -0.33
TCOF1-210ENST00000506767 PRLP01236 227 aa12.96□□□□□ -0.33
TCOF1-210ENST00000506767 ADRB3P13945 408 aa12.96□□□□□ -0.33
TCOF1-210ENST00000506767 TIMP2P16035 220 aa12.96□□□□□ -0.33
TCOF1-210ENST00000506767 CD6P30203 668 aa12.96□□□□□ -0.33
TCOF1-210ENST00000506767 DEKP35659 375 aaKnown RBP12.96□□□□□ -0.33
TCOF1-210ENST00000506767 COILP38432 576 aaPredicted RBP12.96□□□□□ -0.33
TCOF1-210ENST00000506767 CD86P42081 329 aa12.96□□□□□ -0.33
TCOF1-210ENST00000506767 PAFAH1B1P43034 410 aa12.96□□□□□ -0.33
TCOF1-210ENST00000506767 KCNJ1P48048 391 aa12.96□□□□□ -0.33
TCOF1-210ENST00000506767 NEK3P51956 506 aa12.96□□□□□ -0.33
TCOF1-210ENST00000506767 TAS2R38P59533 333 aa12.96□□□□□ -0.33
TCOF1-210ENST00000506767 CCDC15Q0P6D6 951 aa12.96□□□□□ -0.33
TCOF1-210ENST00000506767 ITPRIPL1Q6GPH6 555 aa12.96□□□□□ -0.33
TCOF1-210ENST00000506767 BRAT1Q6PJG6 821 aa12.96□□□□□ -0.33
TCOF1-210ENST00000506767 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP12.96□□□□□ -0.33
TCOF1-210ENST00000506767 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP12.96□□□□□ -0.33
TCOF1-210ENST00000506767 FAM160A2Q8N612 972 aaPredicted RBP12.96□□□□□ -0.33
TCOF1-210ENST00000506767 GLIS1Q8NBF1 620 aa12.96□□□□□ -0.33
TCOF1-210ENST00000506767 ATL2Q8NHH9 583 aa12.96□□□□□ -0.33
TCOF1-210ENST00000506767 SPATA22Q8NHS9 363 aa12.96□□□□□ -0.33
TCOF1-210ENST00000506767 MAGOHBQ96A72 148 aaKnown RBP12.96□□□□□ -0.33
TCOF1-210ENST00000506767 RBM15Q96T37 977 aaKnown RBP eCLIP12.96□□□□□ -0.33
TCOF1-210ENST00000506767 TDRD1Q9BXT4 1180 aaKnown RBP12.96□□□□□ -0.33
TCOF1-210ENST00000506767 GBA3Q9H227 469 aa12.96□□□□□ -0.33
TCOF1-210ENST00000506767 SGK2Q9HBY8 427 aa12.96□□□□□ -0.33
TCOF1-210ENST00000506767 DYRK4Q9NR20 520 aa12.96□□□□□ -0.33
TCOF1-210ENST00000506767 RAI2Q9Y5P3 530 aa12.96□□□□□ -0.33
TCOF1-210ENST00000506767 PIEZO1Q92508 2521 aa12.95□□□□□ -0.34
TCOF1-210ENST00000506767 GOLGA6L10A0A0M3HER8 536 aa12.95□□□□□ -0.34
TCOF1-210ENST00000506767 SPINT1O43278 529 aa12.95□□□□□ -0.34
TCOF1-210ENST00000506767 PLRG1O43660 514 aaKnown RBP12.95□□□□□ -0.34
TCOF1-210ENST00000506767 RPP40O75818 363 aaKnown RBP12.95□□□□□ -0.34
TCOF1-210ENST00000506767 PGLSO95336 258 aa12.95□□□□□ -0.34
TCOF1-210ENST00000506767 MT-CYBP00156 380 aaPredicted RBP12.95□□□□□ -0.34
TCOF1-210ENST00000506767 PDHA1P08559 390 aa12.95□□□□□ -0.34
TCOF1-210ENST00000506767 BCKDHBP21953 392 aa12.95□□□□□ -0.34
TCOF1-210ENST00000506767 ACSL1P33121 698 aa12.95□□□□□ -0.34
TCOF1-210ENST00000506767 FNTAP49354 379 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms