RNA–Protein interactions for RNA: ENST00000506632.2

PDLIM5-209, Transcript of PDZ and LIM domain 5, humanhuman

TSL 3

Gene PDLIM5, Length 907 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-209ENST00000506632 NIPA2Q8N8Q9 360 aa9.19□□□□□ -0.94
PDLIM5-209ENST00000506632 NETO2Q8NC67 525 aa9.19□□□□□ -0.94
PDLIM5-209ENST00000506632 DENND6BQ8NEG7 585 aa9.19□□□□□ -0.94
PDLIM5-209ENST00000506632 HCAR2Q8TDS4 363 aa9.19□□□□□ -0.94
PDLIM5-209ENST00000506632 ARHGEF26Q96DR7 871 aa9.19□□□□□ -0.94
PDLIM5-209ENST00000506632 IFT43Q96FT9 208 aa9.19□□□□□ -0.94
PDLIM5-209ENST00000506632 CELF6Q96J87 481 aaKnown RBP9.19□□□□□ -0.94
PDLIM5-209ENST00000506632 CNDP2Q96KP4 475 aaKnown RBP9.19□□□□□ -0.94
PDLIM5-209ENST00000506632 THAP2Q9H0W7 228 aa9.19□□□□□ -0.94
PDLIM5-209ENST00000506632 CWC15Q9P013 229 aaKnown RBP9.19□□□□□ -0.94
PDLIM5-209ENST00000506632 IFNKQ9P0W0 207 aa9.19□□□□□ -0.94
PDLIM5-209ENST00000506632 MYO1AQ9UBC5 1043 aa9.19□□□□□ -0.94
PDLIM5-209ENST00000506632 UBA2Q9UBT2 640 aaPredicted RBP9.19□□□□□ -0.94
PDLIM5-209ENST00000506632 ZMIZ1Q9ULJ6 1067 aa9.19□□□□□ -0.94
PDLIM5-209ENST00000506632 ITM2BQ9Y287 266 aa9.19□□□□□ -0.94
PDLIM5-209ENST00000506632 PCDHGA1Q9Y5H4 931 aa9.19□□□□□ -0.94
PDLIM5-209ENST00000506632 IGLON5A6NGN9 336 aa9.18□□□□□ -0.94
PDLIM5-209ENST00000506632 ARHGAP42A6NI28 874 aa9.18□□□□□ -0.94
PDLIM5-209ENST00000506632 A6NNZ2 444 aa9.18□□□□□ -0.94
PDLIM5-209ENST00000506632 TRIM38O00635 465 aa9.18□□□□□ -0.94
PDLIM5-209ENST00000506632 INSIG1O15503 277 aa9.18□□□□□ -0.94
PDLIM5-209ENST00000506632 PIAS2O75928 621 aa9.18□□□□□ -0.94
PDLIM5-209ENST00000506632 LDOC1O95751 146 aaPredicted RBP9.18□□□□□ -0.94
PDLIM5-209ENST00000506632 C1SP09871 688 aa9.18□□□□□ -0.94
PDLIM5-209ENST00000506632 TIMP2P16035 220 aa9.18□□□□□ -0.94
PDLIM5-209ENST00000506632 DGKAP23743 735 aa9.18□□□□□ -0.94
PDLIM5-209ENST00000506632 RGRP47804 291 aa9.18□□□□□ -0.94
PDLIM5-209ENST00000506632 CSNK1DP48730 415 aa9.18□□□□□ -0.94
PDLIM5-209ENST00000506632 PAPOLAP51003 745 aaKnown RBP9.18□□□□□ -0.94
PDLIM5-209ENST00000506632 SUOXP51687 545 aa9.18□□□□□ -0.94
PDLIM5-209ENST00000506632 PFN3P60673 137 aa9.18□□□□□ -0.94
PDLIM5-209ENST00000506632 SLC25A11Q02978 314 aaKnown RBP9.18□□□□□ -0.94
PDLIM5-209ENST00000506632 ACACAQ13085 2346 aa9.18□□□□□ -0.94
PDLIM5-209ENST00000506632 DNAJC3Q13217 504 aa9.18□□□□□ -0.94
PDLIM5-209ENST00000506632 FZD2Q14332 565 aa9.18□□□□□ -0.94
PDLIM5-209ENST00000506632 PIGHQ14442 188 aaPredicted RBP9.18□□□□□ -0.94
PDLIM5-209ENST00000506632 GRM3Q14832 879 aa9.18□□□□□ -0.94
PDLIM5-209ENST00000506632 SKOR2Q2VWA4 1001 aaPredicted RBP9.18□□□□□ -0.94
PDLIM5-209ENST00000506632 PROX2Q3B8N5 592 aa9.18□□□□□ -0.94
PDLIM5-209ENST00000506632 BOLA3Q53S33 107 aa9.18□□□□□ -0.94
PDLIM5-209ENST00000506632 PPP6R3Q5H9R7 873 aaPredicted RBP9.18□□□□□ -0.94
PDLIM5-209ENST00000506632 TXNRD3NBQ6F5E7 133 aa9.18□□□□□ -0.94
PDLIM5-209ENST00000506632 ALKBH5Q6P6C2 394 aaKnown RBP9.18□□□□□ -0.94
PDLIM5-209ENST00000506632 ARHGAP36Q6ZRI8 547 aa9.18□□□□□ -0.94
PDLIM5-209ENST00000506632 Q6ZSR6 202 aa9.18□□□□□ -0.94
PDLIM5-209ENST00000506632 POLNQ7Z5Q5 900 aa9.18□□□□□ -0.94
PDLIM5-209ENST00000506632 VPS36Q86VN1 386 aa9.18□□□□□ -0.94
PDLIM5-209ENST00000506632 DCP2Q8IU60 420 aaKnown RBP9.18□□□□□ -0.94
PDLIM5-209ENST00000506632 TP53INP2Q8IXH6 220 aa9.18□□□□□ -0.94
PDLIM5-209ENST00000506632 ASPMQ8IZT6 3477 aa9.18□□□□□ -0.94
PDLIM5-209ENST00000506632 LZTR1Q8N653 840 aa9.18□□□□□ -0.94
PDLIM5-209ENST00000506632 CPLX3Q8WVH0 158 aa9.18□□□□□ -0.94
PDLIM5-209ENST00000506632 ZCCHC14Q8WYQ9 949 aaKnown RBP9.18□□□□□ -0.94
PDLIM5-209ENST00000506632 CENPTQ96BT3 561 aa9.18□□□□□ -0.94
PDLIM5-209ENST00000506632 EXOC2Q96KP1 924 aa9.18□□□□□ -0.94
PDLIM5-209ENST00000506632 TUBGCP5Q96RT8 1024 aa9.18□□□□□ -0.94
PDLIM5-209ENST00000506632 XPO4Q9C0E2 1151 aaKnown RBP9.18□□□□□ -0.94
PDLIM5-209ENST00000506632 CAAP1Q9H8G2 361 aa9.18□□□□□ -0.94
PDLIM5-209ENST00000506632 LUC7L2Q9Y383 392 aaKnown RBP9.18□□□□□ -0.94
PDLIM5-209ENST00000506632 SPTY2D1-AS1A0A0U1RR47 76 aa9.17□□□□□ -0.94
PDLIM5-209ENST00000506632 GOLGA8CPA6NN73 597 aa9.17□□□□□ -0.94
PDLIM5-209ENST00000506632 TAF4O00268 1085 aa9.17□□□□□ -0.94
PDLIM5-209ENST00000506632 NEMP1O14524 444 aa9.17□□□□□ -0.94
PDLIM5-209ENST00000506632 BUB1BO60566 1050 aaPredicted RBP9.17□□□□□ -0.94
PDLIM5-209ENST00000506632 SDC3O75056 442 aa9.17□□□□□ -0.94
PDLIM5-209ENST00000506632 RFPL3O75679 317 aa9.17□□□□□ -0.94
PDLIM5-209ENST00000506632 PIGNO95427 931 aa9.17□□□□□ -0.94
PDLIM5-209ENST00000506632 RARAP10276 462 aa9.17□□□□□ -0.94
PDLIM5-209ENST00000506632 CDK4P11802 303 aa9.17□□□□□ -0.94
PDLIM5-209ENST00000506632 CKMT2P17540 419 aa9.17□□□□□ -0.94
PDLIM5-209ENST00000506632 ITIH2P19823 946 aa9.17□□□□□ -0.94
PDLIM5-209ENST00000506632 CASP14P31944 242 aa9.17□□□□□ -0.94
PDLIM5-209ENST00000506632 RABIFP47224 123 aa9.17□□□□□ -0.94
PDLIM5-209ENST00000506632 IL10RBQ08334 325 aa9.17□□□□□ -0.94
PDLIM5-209ENST00000506632 ZNF211Q13398 564 aaPredicted RBP9.17□□□□□ -0.94
PDLIM5-209ENST00000506632 RFTN1Q14699 578 aaPredicted RBP9.17□□□□□ -0.94
PDLIM5-209ENST00000506632 ASTE1Q2TB18 679 aaPredicted RBP9.17□□□□□ -0.94
PDLIM5-209ENST00000506632 TMEM52BQ4KMG9 183 aa9.17□□□□□ -0.94
PDLIM5-209ENST00000506632 LRRC73Q5JTD7 316 aa9.17□□□□□ -0.94
PDLIM5-209ENST00000506632 TPRG1LQ5T0D9 272 aa9.17□□□□□ -0.94
PDLIM5-209ENST00000506632 DHRS13Q6UX07 377 aa9.17□□□□□ -0.94
PDLIM5-209ENST00000506632 PTAR1Q7Z6K3 402 aaPredicted RBP9.17□□□□□ -0.94
PDLIM5-209ENST00000506632 TTC7BQ86TV6 843 aa9.17□□□□□ -0.94
PDLIM5-209ENST00000506632 GALNT15Q8N3T1 639 aa9.17□□□□□ -0.94
PDLIM5-209ENST00000506632 TSEN2Q8NCE0 465 aaKnown RBP9.17□□□□□ -0.94
PDLIM5-209ENST00000506632 OR4C6Q8NH72 309 aa9.17□□□□□ -0.94
PDLIM5-209ENST00000506632 FAM71BQ8TC56 605 aa9.17□□□□□ -0.94
PDLIM5-209ENST00000506632 TEKT4Q8WW24 435 aa9.17□□□□□ -0.94
PDLIM5-209ENST00000506632 ECHDC3Q96DC8 303 aa9.17□□□□□ -0.94
PDLIM5-209ENST00000506632 NSMCE3Q96MG7 304 aa9.17□□□□□ -0.94
PDLIM5-209ENST00000506632 ZNF641Q96N77 438 aaPredicted RBP9.17□□□□□ -0.94
PDLIM5-209ENST00000506632 CSPG4P5Q96PW8 444 aa9.17□□□□□ -0.94
PDLIM5-209ENST00000506632 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP9.17□□□□□ -0.94
PDLIM5-209ENST00000506632 NUP85Q9BW27 656 aa9.17□□□□□ -0.94
PDLIM5-209ENST00000506632 CALN1Q9BXU9 219 aa9.17□□□□□ -0.94
PDLIM5-209ENST00000506632 SUV39H2Q9H5I1 410 aa9.17□□□□□ -0.94
PDLIM5-209ENST00000506632 ZWILCHQ9H900 591 aa9.17□□□□□ -0.94
PDLIM5-209ENST00000506632 ETNK2Q9NVF9 386 aa9.17□□□□□ -0.94
PDLIM5-209ENST00000506632 UCKL1Q9NWZ5 548 aa9.17□□□□□ -0.94
PDLIM5-209ENST00000506632 ANAPC7Q9UJX3 599 aa9.17□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms