RNA–Protein interactions for RNA: ENST00000506560.5

LIN54-206, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

TSL 1 (best) BASIC

Gene LIN54, Length 2,757 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-206ENST00000506560 ARNT2Q9HBZ2 717 aa12.31□□□□□ -0.44
LIN54-206ENST00000506560 CPQQ9Y646 472 aa12.31□□□□□ -0.44
LIN54-206ENST00000506560 SLC4A1P02730 911 aa12.31□□□□□ -0.44
LIN54-206ENST00000506560 RHOCP08134 193 aa12.31□□□□□ -0.44
LIN54-206ENST00000506560 PDHA1P08559 390 aa12.31□□□□□ -0.44
LIN54-206ENST00000506560 SBK3P0C264 359 aa12.31□□□□□ -0.44
LIN54-206ENST00000506560 SLC35E2BP0CK96 405 aa12.31□□□□□ -0.44
LIN54-206ENST00000506560 T-ENOLP0DO92 83 aa12.31□□□□□ -0.44
LIN54-206ENST00000506560 GABRR2P28476 465 aa12.31□□□□□ -0.44
LIN54-206ENST00000506560 RFC2P35250 354 aa12.31□□□□□ -0.44
LIN54-206ENST00000506560 LBX1P52954 281 aa12.31□□□□□ -0.44
LIN54-206ENST00000506560 ARF5P84085 180 aa12.31□□□□□ -0.44
LIN54-206ENST00000506560 DLG1Q12959 904 aa12.31□□□□□ -0.44
LIN54-206ENST00000506560 ITGA9Q13797 1035 aa12.31□□□□□ -0.44
LIN54-206ENST00000506560 USP10Q14694 798 aaKnown RBP12.31□□□□□ -0.44
LIN54-206ENST00000506560 TAF1BQ53T94 588 aaPredicted RBP12.31□□□□□ -0.44
LIN54-206ENST00000506560 TSTD2Q5T7W7 516 aa12.31□□□□□ -0.44
LIN54-206ENST00000506560 CLEC14AQ86T13 490 aa12.31□□□□□ -0.44
LIN54-206ENST00000506560 OR13C4Q8NGS5 318 aa12.31□□□□□ -0.44
LIN54-206ENST00000506560 NSMCE1Q8WV22 266 aa12.31□□□□□ -0.44
LIN54-206ENST00000506560 PLD4Q96BZ4 506 aa12.31□□□□□ -0.44
LIN54-206ENST00000506560 TRMT2BQ96GJ1 504 aaKnown RBP12.31□□□□□ -0.44
LIN54-206ENST00000506560 LRRC37BQ96QE4 947 aa12.31□□□□□ -0.44
LIN54-206ENST00000506560 EBF4Q9BQW3 602 aa12.31□□□□□ -0.44
LIN54-206ENST00000506560 TRIM55Q9BYV6 548 aa12.31□□□□□ -0.44
LIN54-206ENST00000506560 POLR1EQ9GZS1 481 aaKnown RBP12.31□□□□□ -0.44
LIN54-206ENST00000506560 ZBP1Q9H171 429 aa12.31□□□□□ -0.44
LIN54-206ENST00000506560 RHOJQ9H4E5 214 aa12.31□□□□□ -0.44
LIN54-206ENST00000506560 SLC40A1Q9NP59 571 aa12.31□□□□□ -0.44
LIN54-206ENST00000506560 HCFC1R1Q9NWW0 138 aa12.31□□□□□ -0.44
LIN54-206ENST00000506560 COPG2Q9UBF2 871 aa12.31□□□□□ -0.44
LIN54-206ENST00000506560 HEY2Q9UBP5 337 aa12.31□□□□□ -0.44
LIN54-206ENST00000506560 XIRP2A4UGR9 3374 aa12.31□□□□□ -0.44
LIN54-206ENST00000506560 LOC285095A0A1B0GVY8 99 aa12.3□□□□□ -0.44
LIN54-206ENST00000506560 HIDE1A8MVS5 230 aa12.3□□□□□ -0.44
LIN54-206ENST00000506560 LDB2O43679 373 aa12.3□□□□□ -0.44
LIN54-206ENST00000506560 TBL1XO60907 577 aa12.3□□□□□ -0.44
LIN54-206ENST00000506560 SNNO75324 88 aaPredicted RBP12.3□□□□□ -0.44
LIN54-206ENST00000506560 C1RP00736 705 aa12.3□□□□□ -0.44
LIN54-206ENST00000506560 CSRP3P50461 194 aa12.3□□□□□ -0.44
LIN54-206ENST00000506560 ERVFC1P60507 584 aa12.3□□□□□ -0.44
LIN54-206ENST00000506560 FYB2Q5VWT5 728 aa12.3□□□□□ -0.44
LIN54-206ENST00000506560 NEPROQ6NW34 567 aa12.3□□□□□ -0.44
LIN54-206ENST00000506560 KYAT3Q6YP21 454 aaKnown RBP12.3□□□□□ -0.44
LIN54-206ENST00000506560 RAPH1Q70E73 1250 aa12.3□□□□□ -0.44
LIN54-206ENST00000506560 CNTN4Q8IWV2 1026 aa12.3□□□□□ -0.44
LIN54-206ENST00000506560 CENPLQ8N0S6 344 aaPredicted RBP12.3□□□□□ -0.44
LIN54-206ENST00000506560 CARNMT1Q8N4J0 409 aa12.3□□□□□ -0.44
LIN54-206ENST00000506560 GPATCH11Q8N954 259 aa12.3□□□□□ -0.44
LIN54-206ENST00000506560 HDAC10Q969S8 669 aa12.3□□□□□ -0.44
LIN54-206ENST00000506560 ZBED2Q9BTP6 218 aa12.3□□□□□ -0.44
LIN54-206ENST00000506560 C1QTNF1Q9BXJ1 281 aa12.3□□□□□ -0.44
LIN54-206ENST00000506560 ACTR5Q9H9F9 607 aaPredicted RBP12.3□□□□□ -0.44
LIN54-206ENST00000506560 DCDC2Q9UHG0 476 aa12.3□□□□□ -0.44
LIN54-206ENST00000506560 HAO1Q9UJM8 370 aa12.3□□□□□ -0.44
LIN54-206ENST00000506560 FBXO5Q9UKT4 447 aa12.3□□□□□ -0.44
LIN54-206ENST00000506560 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP12.3□□□□□ -0.44
LIN54-206ENST00000506560 G3V2L1 256 aa12.3□□□□□ -0.44
LIN54-206ENST00000506560 KLF11O14901 512 aa12.3□□□□□ -0.44
LIN54-206ENST00000506560 MT-CO1P00395 513 aa12.3□□□□□ -0.44
LIN54-206ENST00000506560 TROVE2P10155 538 aaKnown RBP eCLIP12.3□□□□□ -0.44
LIN54-206ENST00000506560 HDCP19113 662 aa12.3□□□□□ -0.44
LIN54-206ENST00000506560 EPHB3P54753 998 aa12.3□□□□□ -0.44
LIN54-206ENST00000506560 CSE1LP55060 971 aaKnown RBP12.3□□□□□ -0.44
LIN54-206ENST00000506560 OXCT1P55809 520 aa12.3□□□□□ -0.44
LIN54-206ENST00000506560 TAS2R39P59534 338 aa12.3□□□□□ -0.44
LIN54-206ENST00000506560 STX3Q13277 289 aa12.3□□□□□ -0.44
LIN54-206ENST00000506560 ZNF177Q13360 481 aaPredicted RBP12.3□□□□□ -0.44
LIN54-206ENST00000506560 CYTH1Q15438 398 aa12.3□□□□□ -0.44
LIN54-206ENST00000506560 TMEM151AQ8N4L1 468 aa12.3□□□□□ -0.44
LIN54-206ENST00000506560 BADQ92934 168 aa12.3□□□□□ -0.44
LIN54-206ENST00000506560 FATE1Q969F0 183 aa12.3□□□□□ -0.44
LIN54-206ENST00000506560 DNAJC1Q96KC8 554 aaKnown RBP12.3□□□□□ -0.44
LIN54-206ENST00000506560 TBATAQ96M53 351 aa12.3□□□□□ -0.44
LIN54-206ENST00000506560 CDK5RAP1Q96SZ6 601 aaKnown RBP12.3□□□□□ -0.44
LIN54-206ENST00000506560 OLFM1Q99784 485 aa12.3□□□□□ -0.44
LIN54-206ENST00000506560 MUC3BQ9H195 1237 aa12.3□□□□□ -0.44
LIN54-206ENST00000506560 MAGEH1Q9H213 219 aa12.3□□□□□ -0.44
LIN54-206ENST00000506560 VPS45Q9NRW7 570 aa12.3□□□□□ -0.44
LIN54-206ENST00000506560 ARMCX1Q9P291 453 aa12.3□□□□□ -0.44
LIN54-206ENST00000506560 PCDHGC4Q9Y5F7 938 aa12.3□□□□□ -0.44
LIN54-206ENST00000506560 SPO11Q9Y5K1 396 aa12.3□□□□□ -0.44
LIN54-206ENST00000506560 FAM95CA0A1B0GW59 222 aa12.3□□□□□ -0.44
LIN54-206ENST00000506560 A0A1W2PRU2 124 aa12.3□□□□□ -0.44
LIN54-206ENST00000506560 K7ERQ8 282 aa12.3□□□□□ -0.44
LIN54-206ENST00000506560 DNAJB1P25685 340 aa12.3□□□□□ -0.44
LIN54-206ENST00000506560 CCR2P41597 374 aa12.3□□□□□ -0.44
LIN54-206ENST00000506560 ARFIP2P53365 341 aa12.3□□□□□ -0.44
LIN54-206ENST00000506560 CDK18Q07002 472 aa12.3□□□□□ -0.44
LIN54-206ENST00000506560 RABGAP1LQ5R372 815 aa12.3□□□□□ -0.44
LIN54-206ENST00000506560 KIAA0930Q6ICG6 404 aaPredicted RBP12.3□□□□□ -0.44
LIN54-206ENST00000506560 NECAB2Q7Z6G3 386 aa12.3□□□□□ -0.44
LIN54-206ENST00000506560 SUGP1Q8IWZ8 645 aaKnown RBP12.3□□□□□ -0.44
LIN54-206ENST00000506560 TMEM199Q8N511 208 aa12.3□□□□□ -0.44
LIN54-206ENST00000506560 OR6P1Q8NGX9 317 aa12.3□□□□□ -0.44
LIN54-206ENST00000506560 FAM136AQ96C01 138 aa12.3□□□□□ -0.44
LIN54-206ENST00000506560 SORT1Q99523 831 aa12.3□□□□□ -0.44
LIN54-206ENST00000506560 UBA2Q9UBT2 640 aaPredicted RBP12.3□□□□□ -0.44
LIN54-206ENST00000506560 MYO9BQ13459 2157 aa12.29□□□□□ -0.44
LIN54-206ENST00000506560 DENND4CQ5VZ89 1909 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 67.6 ms