RNA–Protein interactions for RNA: ENST00000506515.1

HERC4-213, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 4

Gene HERC4, Length 540 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-213ENST00000506515 SLC45A4Q5BKX6 768 aa6.27□□□□□ -1.41
HERC4-213ENST00000506515 LCE5AQ5TCM9 118 aa6.27□□□□□ -1.41
HERC4-213ENST00000506515 SERTAD4-AS1Q5TG53 156 aa6.27□□□□□ -1.41
HERC4-213ENST00000506515 CLEC4GQ6UXB4 293 aa6.27□□□□□ -1.41
HERC4-213ENST00000506515 DNAJC10Q8IXB1 793 aa6.27□□□□□ -1.41
HERC4-213ENST00000506515 FAM185AQ8N0U4 392 aa6.27□□□□□ -1.41
HERC4-213ENST00000506515 C11orf65Q8NCR3 313 aa6.27□□□□□ -1.41
HERC4-213ENST00000506515 SLC44A5Q8NCS7 719 aa6.27□□□□□ -1.41
HERC4-213ENST00000506515 ETNPPLQ8TBG4 499 aa6.27□□□□□ -1.41
HERC4-213ENST00000506515 CRAMP1Q96RY5 1269 aa6.27□□□□□ -1.41
HERC4-213ENST00000506515 NUF2Q9BZD4 464 aa6.27□□□□□ -1.41
HERC4-213ENST00000506515 RANBP17Q9H2T7 1088 aaKnown RBP6.27□□□□□ -1.41
HERC4-213ENST00000506515 PLEKHA5Q9HAU0 1116 aa6.27□□□□□ -1.41
HERC4-213ENST00000506515 FBXO9Q9UK97 447 aaPredicted RBP6.27□□□□□ -1.41
HERC4-213ENST00000506515 JCADQ9P266 1359 aa6.27□□□□□ -1.41
HERC4-213ENST00000506515 POLR1AO95602 1720 aaPredicted RBP6.27□□□□□ -1.41
HERC4-213ENST00000506515 PZPP20742 1482 aa6.27□□□□□ -1.41
HERC4-213ENST00000506515 SAMD9LQ8IVG5 1584 aa6.27□□□□□ -1.41
HERC4-213ENST00000506515 ATP7AQ04656 1500 aa6.26□□□□□ -1.41
HERC4-213ENST00000506515 LRRC7Q96NW7 1537 aa6.26□□□□□ -1.41
HERC4-213ENST00000506515 PREX2Q70Z35 1606 aa6.26□□□□□ -1.41
HERC4-213ENST00000506515 PI4KAP2A4QPH2 592 aa6.26□□□□□ -1.41
HERC4-213ENST00000506515 CGB1A6NKQ9 187 aa6.26□□□□□ -1.41
HERC4-213ENST00000506515 A6NNC1 897 aa6.26□□□□□ -1.41
HERC4-213ENST00000506515 MASP2O00187 686 aa6.26□□□□□ -1.41
HERC4-213ENST00000506515 TGFB1I1O43294 461 aa6.26□□□□□ -1.41
HERC4-213ENST00000506515 TLR2O60603 784 aa6.26□□□□□ -1.41
HERC4-213ENST00000506515 CLEC3BP05452 202 aa6.26□□□□□ -1.41
HERC4-213ENST00000506515 UNGP13051 313 aaPredicted RBP6.26□□□□□ -1.41
HERC4-213ENST00000506515 RFC1P35251 1148 aaPredicted RBP6.26□□□□□ -1.41
HERC4-213ENST00000506515 EFNA5P52803 228 aa6.26□□□□□ -1.41
HERC4-213ENST00000506515 RPS3AP61247 264 aaKnown RBP6.26□□□□□ -1.41
HERC4-213ENST00000506515 SETQ01105 290 aaPredicted RBP6.26□□□□□ -1.41
HERC4-213ENST00000506515 PKP1Q13835 747 aa6.26□□□□□ -1.41
HERC4-213ENST00000506515 VEPH1Q14D04 833 aa6.26□□□□□ -1.41
HERC4-213ENST00000506515 SRSF7Q16629 238 aaKnown RBP eCLIP6.26□□□□□ -1.41
HERC4-213ENST00000506515 PIK3CD-AS1Q5SR53 167 aa6.26□□□□□ -1.41
HERC4-213ENST00000506515 LURAP1LQ8IV03 231 aa6.26□□□□□ -1.41
HERC4-213ENST00000506515 FAM217AQ8IXS0 508 aa6.26□□□□□ -1.41
HERC4-213ENST00000506515 OR4N2Q8NGD1 307 aa6.26□□□□□ -1.41
HERC4-213ENST00000506515 PIP5K1AQ99755 562 aa6.26□□□□□ -1.41
HERC4-213ENST00000506515 WDR83Q9BRX9 315 aaKnown RBP6.26□□□□□ -1.41
HERC4-213ENST00000506515 TMX4Q9H1E5 349 aaPredicted RBP6.26□□□□□ -1.41
HERC4-213ENST00000506515 WDR6Q9NNW5 1121 aaKnown RBP6.26□□□□□ -1.41
HERC4-213ENST00000506515 TBC1D22BQ9NU19 505 aa6.26□□□□□ -1.41
HERC4-213ENST00000506515 MSRB1Q9NZV6 116 aa6.26□□□□□ -1.41
HERC4-213ENST00000506515 PIAS3Q9Y6X2 628 aa6.26□□□□□ -1.41
HERC4-213ENST00000506515 ADGBQ8N7X0 1667 aa6.26□□□□□ -1.41
HERC4-213ENST00000506515 ITSN2Q9NZM3 1697 aa6.26□□□□□ -1.41
HERC4-213ENST00000506515 ADGRF5Q8IZF2 1346 aa6.25□□□□□ -1.41
HERC4-213ENST00000506515 GPATCH8Q9UKJ3 1502 aaKnown RBP6.25□□□□□ -1.41
HERC4-213ENST00000506515 A0A1W2PQM1 296 aa6.25□□□□□ -1.41
HERC4-213ENST00000506515 PRSS47A8MTI9 375 aa6.25□□□□□ -1.41
HERC4-213ENST00000506515 SNAP23O00161 211 aa6.25□□□□□ -1.41
HERC4-213ENST00000506515 KIF1CO43896 1103 aaKnown RBP6.25□□□□□ -1.41
HERC4-213ENST00000506515 RNASEH2AO75792 299 aaKnown RBP6.25□□□□□ -1.41
HERC4-213ENST00000506515 EDN2P20800 178 aa6.25□□□□□ -1.41
HERC4-213ENST00000506515 CD38P28907 300 aa6.25□□□□□ -1.41
HERC4-213ENST00000506515 ICAM3P32942 547 aa6.25□□□□□ -1.41
HERC4-213ENST00000506515 TNFSF8P32971 234 aa6.25□□□□□ -1.41
HERC4-213ENST00000506515 EIF3BP55884 814 aaKnown RBP6.25□□□□□ -1.41
HERC4-213ENST00000506515 SLC18A2Q05940 514 aa6.25□□□□□ -1.41
HERC4-213ENST00000506515 MZT2BQ6NZ67 158 aa6.25□□□□□ -1.41
HERC4-213ENST00000506515 DEF8Q6ZN54 512 aa6.25□□□□□ -1.41
HERC4-213ENST00000506515 SLC46A3Q7Z3Q1 461 aa6.25□□□□□ -1.41
HERC4-213ENST00000506515 PCGF5Q86SE9 256 aa6.25□□□□□ -1.41
HERC4-213ENST00000506515 SERPINA11Q86U17 422 aa6.25□□□□□ -1.41
HERC4-213ENST00000506515 SUGP2Q8IX01 1082 aaKnown RBP eCLIP6.25□□□□□ -1.41
HERC4-213ENST00000506515 NGEFQ8N5V2 710 aa6.25□□□□□ -1.41
HERC4-213ENST00000506515 HORMAD2Q8N7B1 307 aa6.25□□□□□ -1.41
HERC4-213ENST00000506515 CADM4Q8NFZ8 388 aa6.25□□□□□ -1.41
HERC4-213ENST00000506515 BRF2Q9HAW0 419 aa6.25□□□□□ -1.41
HERC4-213ENST00000506515 RNF146Q9NTX7 359 aa6.25□□□□□ -1.41
HERC4-213ENST00000506515 COG5Q9UP83 839 aa6.25□□□□□ -1.41
HERC4-213ENST00000506515 PSAT1Q9Y617 370 aa6.25□□□□□ -1.41
HERC4-213ENST00000506515 MSH6P52701 1360 aa6.25□□□□□ -1.41
HERC4-213ENST00000506515 MTUS2Q5JR59 1369 aa6.25□□□□□ -1.41
HERC4-213ENST00000506515 LRRC9Q6ZRR7 1453 aa6.25□□□□□ -1.41
HERC4-213ENST00000506515 SYNMO15061 1565 aa6.24□□□□□ -1.41
HERC4-213ENST00000506515 A0A0G2JK05 382 aa6.24□□□□□ -1.41
HERC4-213ENST00000506515 C17orf102A2RUQ5 167 aa6.24□□□□□ -1.41
HERC4-213ENST00000506515 IFNL4K9M1U5 179 aa6.24□□□□□ -1.41
HERC4-213ENST00000506515 ZBED4O75132 1171 aa6.24□□□□□ -1.41
HERC4-213ENST00000506515 RARSP54136 660 aaKnown RBP6.24□□□□□ -1.41
HERC4-213ENST00000506515 NANOS3P60323 173 aaKnown RBP6.24□□□□□ -1.41
HERC4-213ENST00000506515 RUNX2Q13950 521 aa6.24□□□□□ -1.41
HERC4-213ENST00000506515 SNX30Q5VWJ9 437 aa6.24□□□□□ -1.41
HERC4-213ENST00000506515 ZNF626Q68DY1 528 aa6.24□□□□□ -1.41
HERC4-213ENST00000506515 ITPRIPL1Q6GPH6 555 aa6.24□□□□□ -1.41
HERC4-213ENST00000506515 NEK10Q6ZWH5 1172 aa6.24□□□□□ -1.41
HERC4-213ENST00000506515 PXKQ7Z7A4 578 aa6.24□□□□□ -1.41
HERC4-213ENST00000506515 GPSM1Q86YR5 675 aa6.24□□□□□ -1.41
HERC4-213ENST00000506515 KIAA2013Q8IYS2 634 aa6.24□□□□□ -1.41
HERC4-213ENST00000506515 CADM3Q8N126 398 aa6.24□□□□□ -1.41
HERC4-213ENST00000506515 NTN5Q8WTR8 489 aaPredicted RBP6.24□□□□□ -1.41
HERC4-213ENST00000506515 TMEM170AQ8WVE7 144 aa6.24□□□□□ -1.41
HERC4-213ENST00000506515 B3GNT4Q9C0J1 378 aa6.24□□□□□ -1.41
HERC4-213ENST00000506515 SLITRK6Q9H5Y7 841 aa6.24□□□□□ -1.41
HERC4-213ENST00000506515 DIAPH3Q9NSV4 1193 aa6.24□□□□□ -1.41
HERC4-213ENST00000506515 TERF2IPQ9NYB0 399 aa6.24□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms