RNA–Protein interactions for RNA: ENST00000506154.1

NEDD4-205, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene NEDD4, Length 6,751 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-205ENST00000506154 TOB1P50616 345 aaPredicted RBP2.31□□□□□ -2.04
NEDD4-205ENST00000506154 PLCD1P51178 756 aa2.31□□□□□ -2.04
NEDD4-205ENST00000506154 GSTO1P78417 241 aa2.31□□□□□ -2.04
NEDD4-205ENST00000506154 ADAM17P78536 824 aa2.31□□□□□ -2.04
NEDD4-205ENST00000506154 IFITM3Q01628 133 aa2.31□□□□□ -2.04
NEDD4-205ENST00000506154 RAD51Q06609 339 aa2.31□□□□□ -2.04
NEDD4-205ENST00000506154 RAPSNQ13702 412 aa2.31□□□□□ -2.04
NEDD4-205ENST00000506154 CYLC2Q14093 348 aaPredicted RBP2.31□□□□□ -2.04
NEDD4-205ENST00000506154 NR1I3Q14994 352 aa2.31□□□□□ -2.04
NEDD4-205ENST00000506154 DEFB115Q30KQ5 88 aa2.31□□□□□ -2.04
NEDD4-205ENST00000506154 FAM182BQ5T319 152 aa2.31□□□□□ -2.04
NEDD4-205ENST00000506154 LIN54Q6MZP7 749 aa2.31□□□□□ -2.04
NEDD4-205ENST00000506154 GPAT2Q6NUI2 795 aa2.31□□□□□ -2.04
NEDD4-205ENST00000506154 KLHDC10Q6PID8 442 aa2.31□□□□□ -2.04
NEDD4-205ENST00000506154 DSTYKQ6XUX3 929 aa2.31□□□□□ -2.04
NEDD4-205ENST00000506154 C1orf122Q6ZSJ8 110 aa2.31□□□□□ -2.04
NEDD4-205ENST00000506154 TRIM67Q6ZTA4 783 aa2.31□□□□□ -2.04
NEDD4-205ENST00000506154 FAM129CQ86XR2 697 aa2.31□□□□□ -2.04
NEDD4-205ENST00000506154 LRRC47Q8N1G4 583 aaKnown RBP2.31□□□□□ -2.04
NEDD4-205ENST00000506154 IL17RDQ8NFM7 739 aa2.31□□□□□ -2.04
NEDD4-205ENST00000506154 PIP4K2CQ8TBX8 421 aa2.31□□□□□ -2.04
NEDD4-205ENST00000506154 TMBIM1Q969X1 311 aa2.31□□□□□ -2.04
NEDD4-205ENST00000506154 C18orf25Q96B23 403 aaPredicted RBP2.31□□□□□ -2.04
NEDD4-205ENST00000506154 PTCD3Q96EY7 689 aaKnown RBP2.31□□□□□ -2.04
NEDD4-205ENST00000506154 MCRS1Q96EZ8 462 aa2.31□□□□□ -2.04
NEDD4-205ENST00000506154 KLHL15Q96M94 604 aa2.31□□□□□ -2.04
NEDD4-205ENST00000506154 VPS35Q96QK1 796 aa2.31□□□□□ -2.04
NEDD4-205ENST00000506154 TWNKQ96RR1 684 aa2.31□□□□□ -2.04
NEDD4-205ENST00000506154 TIGARQ9NQ88 270 aa2.31□□□□□ -2.04
NEDD4-205ENST00000506154 RXFP3Q9NSD7 469 aa2.31□□□□□ -2.04
NEDD4-205ENST00000506154 IARS2Q9NSE4 1012 aaKnown RBP2.31□□□□□ -2.04
NEDD4-205ENST00000506154 KLHL9Q9P2J3 617 aa2.31□□□□□ -2.04
NEDD4-205ENST00000506154 TUBD1Q9UJT1 453 aa2.31□□□□□ -2.04
NEDD4-205ENST00000506154 DNAJC12Q9UKB3 198 aa2.31□□□□□ -2.04
NEDD4-205ENST00000506154 SNX8Q9Y5X2 465 aa2.31□□□□□ -2.04
NEDD4-205ENST00000506154 DGKBQ9Y6T7 804 aa2.31□□□□□ -2.04
NEDD4-205ENST00000506154 GREB1Q4ZG55 1949 aa2.3□□□□□ -2.04
NEDD4-205ENST00000506154 C2orf71A6NGG8 1288 aa2.3□□□□□ -2.04
NEDD4-205ENST00000506154 CCDC154A6NI56 674 aa2.3□□□□□ -2.04
NEDD4-205ENST00000506154 K7EPI3 171 aa2.3□□□□□ -2.04
NEDD4-205ENST00000506154 M0R082 166 aa2.3□□□□□ -2.04
NEDD4-205ENST00000506154 VWA5AO00534 786 aa2.3□□□□□ -2.04
NEDD4-205ENST00000506154 PODXLO00592 558 aa2.3□□□□□ -2.04
NEDD4-205ENST00000506154 ACSL4O60488 711 aa2.3□□□□□ -2.04
NEDD4-205ENST00000506154 UGT2B4P06133 528 aa2.3□□□□□ -2.04
NEDD4-205ENST00000506154 HOXD4P09016 255 aaPredicted RBP2.3□□□□□ -2.04
NEDD4-205ENST00000506154 AKR1B1P15121 316 aa2.3□□□□□ -2.04
NEDD4-205ENST00000506154 EIF2S2P20042 333 aaKnown RBP2.3□□□□□ -2.04
NEDD4-205ENST00000506154 HNRNPH3P31942 346 aaKnown RBP2.3□□□□□ -2.04
NEDD4-205ENST00000506154 CIITAP33076 1130 aa2.3□□□□□ -2.04
NEDD4-205ENST00000506154 VHLP40337 213 aa2.3□□□□□ -2.04
NEDD4-205ENST00000506154 SUCLG1P53597 346 aaKnown RBP2.3□□□□□ -2.04
NEDD4-205ENST00000506154 CDH4P55283 916 aa2.3□□□□□ -2.04
NEDD4-205ENST00000506154 RPP38P78345 283 aaKnown RBP2.3□□□□□ -2.04
NEDD4-205ENST00000506154 MPP2Q14168 576 aa2.3□□□□□ -2.04
NEDD4-205ENST00000506154 MTFR1Q15390 333 aa2.3□□□□□ -2.04
NEDD4-205ENST00000506154 SYT16Q17RD7 645 aa2.3□□□□□ -2.04
NEDD4-205ENST00000506154 C6orf183Q5T699 404 aa2.3□□□□□ -2.04
NEDD4-205ENST00000506154 CLEC6AQ6EIG7 209 aa2.3□□□□□ -2.04
NEDD4-205ENST00000506154 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP2.3□□□□□ -2.04
NEDD4-205ENST00000506154 CACNA2D4Q7Z3S7 1137 aa2.3□□□□□ -2.04
NEDD4-205ENST00000506154 ZDHHC14Q8IZN3 488 aa2.3□□□□□ -2.04
NEDD4-205ENST00000506154 CPA6Q8N4T0 437 aa2.3□□□□□ -2.04
NEDD4-205ENST00000506154 TEX19Q8NA77 164 aa2.3□□□□□ -2.04
NEDD4-205ENST00000506154 ZNF540Q8NDQ6 660 aa2.3□□□□□ -2.04
NEDD4-205ENST00000506154 OR4M2Q8NGB6 313 aa2.3□□□□□ -2.04
NEDD4-205ENST00000506154 ZNF417Q8TAU3 575 aa2.3□□□□□ -2.04
NEDD4-205ENST00000506154 GTF3AQ92664 365 aaKnown RBP2.3□□□□□ -2.04
NEDD4-205ENST00000506154 ZNF587Q96SQ5 575 aaPredicted RBP2.3□□□□□ -2.04
NEDD4-205ENST00000506154 RTKNQ9BST9 563 aa2.3□□□□□ -2.04
NEDD4-205ENST00000506154 CNPPD1Q9BV87 410 aa2.3□□□□□ -2.04
NEDD4-205ENST00000506154 ADAMTS10Q9H324 1103 aa2.3□□□□□ -2.04
NEDD4-205ENST00000506154 MLXIPQ9HAP2 919 aa2.3□□□□□ -2.04
NEDD4-205ENST00000506154 MOV10Q9HCE1 1003 aaKnown RBP2.3□□□□□ -2.04
NEDD4-205ENST00000506154 KIAA1586Q9HCI6 787 aa2.3□□□□□ -2.04
NEDD4-205ENST00000506154 NANSQ9NR45 359 aa2.3□□□□□ -2.04
NEDD4-205ENST00000506154 FARSBQ9NSD9 589 aaKnown RBP2.3□□□□□ -2.04
NEDD4-205ENST00000506154 IGSF9Q9P2J2 1179 aa2.3□□□□□ -2.04
NEDD4-205ENST00000506154 MAD2L2Q9UI95 211 aa2.3□□□□□ -2.04
NEDD4-205ENST00000506154 KCNH3Q9ULD8 1083 aa2.3□□□□□ -2.04
NEDD4-205ENST00000506154 CDC14AQ9UNH5 594 aa2.3□□□□□ -2.04
NEDD4-205ENST00000506154 DUSP12Q9UNI6 340 aa2.3□□□□□ -2.04
NEDD4-205ENST00000506154 BACE2Q9Y5Z0 518 aa2.3□□□□□ -2.04
NEDD4-205ENST00000506154 SMCHD1A6NHR9 2005 aa2.3□□□□□ -2.04
NEDD4-205ENST00000506154 NUDT19A8MXV4 375 aa2.3□□□□□ -2.04
NEDD4-205ENST00000506154 TOR1AO14656 332 aa2.3□□□□□ -2.04
NEDD4-205ENST00000506154 AREL1O15033 823 aa2.3□□□□□ -2.04
NEDD4-205ENST00000506154 SLC7A4O43246 635 aa2.3□□□□□ -2.04
NEDD4-205ENST00000506154 CCDC22O60826 627 aa2.3□□□□□ -2.04
NEDD4-205ENST00000506154 ACAA1P09110 424 aaPredicted RBP2.3□□□□□ -2.04
NEDD4-205ENST00000506154 RPS12P25398 132 aaKnown RBP2.3□□□□□ -2.04
NEDD4-205ENST00000506154 PPM1AP35813 382 aa2.3□□□□□ -2.04
NEDD4-205ENST00000506154 HTR3AP46098 478 aa2.3□□□□□ -2.04
NEDD4-205ENST00000506154 NPTX2P47972 431 aa2.3□□□□□ -2.04
NEDD4-205ENST00000506154 CLK3P49761 638 aaKnown RBP2.3□□□□□ -2.04
NEDD4-205ENST00000506154 AFF1P51825 1210 aaKnown RBP2.3□□□□□ -2.04
NEDD4-205ENST00000506154 ARFIP1P53367 373 aa2.3□□□□□ -2.04
NEDD4-205ENST00000506154 KCNQ4P56696 695 aa2.3□□□□□ -2.04
NEDD4-205ENST00000506154 IRF9Q00978 393 aa2.3□□□□□ -2.04
NEDD4-205ENST00000506154 KDSRQ06136 332 aa2.3□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms