RNA–Protein interactions for RNA: ENST00000504181.1

LSM6-204, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM6, Length 549 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-204ENST00000504181 NUDT21O43809 227 aaKnown RBP12.7□□□□□ -0.38
LSM6-204ENST00000504181 FYNP06241 537 aa12.7□□□□□ -0.38
LSM6-204ENST00000504181 MPSTP25325 297 aa12.7□□□□□ -0.38
LSM6-204ENST00000504181 LEPRP48357 1165 aaKnown RBP12.7□□□□□ -0.38
LSM6-204ENST00000504181 GCLMP48507 274 aa12.7□□□□□ -0.38
LSM6-204ENST00000504181 LIMK2P53671 638 aa12.7□□□□□ -0.38
LSM6-204ENST00000504181 NR6A1Q15406 480 aa12.7□□□□□ -0.38
LSM6-204ENST00000504181 OGFOD3Q6PK18 319 aa12.7□□□□□ -0.38
LSM6-204ENST00000504181 LINGO4Q6UY18 593 aa12.7□□□□□ -0.38
LSM6-204ENST00000504181 TAF8Q7Z7C8 310 aa12.7□□□□□ -0.38
LSM6-204ENST00000504181 TMEM135Q86UB9 458 aa12.7□□□□□ -0.38
LSM6-204ENST00000504181 CCDC150Q8NCX0 1101 aa12.7□□□□□ -0.38
LSM6-204ENST00000504181 RTP4Q96DX8 246 aa12.7□□□□□ -0.38
LSM6-204ENST00000504181 PRMT1Q99873 361 aaKnown RBP12.7□□□□□ -0.38
LSM6-204ENST00000504181 CTRCQ99895 268 aa12.7□□□□□ -0.38
LSM6-204ENST00000504181 SPRY4Q9C004 299 aa12.7□□□□□ -0.38
LSM6-204ENST00000504181 TNMDQ9H2S6 317 aa12.7□□□□□ -0.38
LSM6-204ENST00000504181 SLC39A2Q9NP94 309 aa12.7□□□□□ -0.38
LSM6-204ENST00000504181 RRN3Q9NYV6 651 aa12.7□□□□□ -0.38
LSM6-204ENST00000504181 PHTF1Q9UMS5 762 aa12.7□□□□□ -0.38
LSM6-204ENST00000504181 POLHQ9Y253 713 aa12.7□□□□□ -0.38
LSM6-204ENST00000504181 SRPRBQ9Y5M8 271 aaKnown RBP12.7□□□□□ -0.38
LSM6-204ENST00000504181 CLIC4Q9Y696 253 aa12.7□□□□□ -0.38
LSM6-204ENST00000504181 TRIM49P0CI25 452 aa12.69□□□□□ -0.38
LSM6-204ENST00000504181 TRIM49CP0CI26 452 aa12.69□□□□□ -0.38
LSM6-204ENST00000504181 SETSIPP0DME0 302 aa12.69□□□□□ -0.38
LSM6-204ENST00000504181 CD19P15391 556 aa12.69□□□□□ -0.38
LSM6-204ENST00000504181 F8A1P23610 371 aa12.69□□□□□ -0.38
LSM6-204ENST00000504181 PMS2P54278 862 aa12.69□□□□□ -0.38
LSM6-204ENST00000504181 RAB15P59190 212 aa12.69□□□□□ -0.38
LSM6-204ENST00000504181 SRP54P61011 504 aaKnown RBP12.69□□□□□ -0.38
LSM6-204ENST00000504181 KRT83P78385 493 aa12.69□□□□□ -0.38
LSM6-204ENST00000504181 KCTD16Q68DU8 428 aa12.69□□□□□ -0.38
LSM6-204ENST00000504181 ZGRF1Q86YA3 2104 aa12.69□□□□□ -0.38
LSM6-204ENST00000504181 ATP6V0D2Q8N8Y2 350 aa12.69□□□□□ -0.38
LSM6-204ENST00000504181 TP53I13Q8NBR0 393 aaPredicted RBP12.69□□□□□ -0.38
LSM6-204ENST00000504181 PDXPQ96GD0 296 aa12.69□□□□□ -0.38
LSM6-204ENST00000504181 RPRD1AQ96P16 312 aaPredicted RBP12.69□□□□□ -0.38
LSM6-204ENST00000504181 RBM15Q96T37 977 aaKnown RBP eCLIP12.69□□□□□ -0.38
LSM6-204ENST00000504181 PSMB7Q99436 277 aa12.69□□□□□ -0.38
LSM6-204ENST00000504181 MIS12Q9H081 205 aa12.69□□□□□ -0.38
LSM6-204ENST00000504181 DMAC2Q9NW81 257 aa12.69□□□□□ -0.38
LSM6-204ENST00000504181 RCOR3Q9P2K3 495 aaPredicted RBP12.69□□□□□ -0.38
LSM6-204ENST00000504181 KLQ9UEF7 1012 aa12.69□□□□□ -0.38
LSM6-204ENST00000504181 VPS51Q9UID3 782 aa12.69□□□□□ -0.38
LSM6-204ENST00000504181 FER1L5A0AVI2 2057 aa12.69□□□□□ -0.38
LSM6-204ENST00000504181 PKDREJQ9NTG1 2253 aa12.68□□□□□ -0.38
LSM6-204ENST00000504181 CDC14CA4D256 554 aa12.68□□□□□ -0.38
LSM6-204ENST00000504181 KCNU1A8MYU2 1149 aa12.68□□□□□ -0.38
LSM6-204ENST00000504181 TOR1BO14657 336 aa12.68□□□□□ -0.38
LSM6-204ENST00000504181 PYGBP11216 843 aa12.68□□□□□ -0.38
LSM6-204ENST00000504181 STAT5AP42229 794 aa12.68□□□□□ -0.38
LSM6-204ENST00000504181 VAMP7P51809 220 aa12.68□□□□□ -0.38
LSM6-204ENST00000504181 MAZP56270 477 aaKnown RBP12.68□□□□□ -0.38
LSM6-204ENST00000504181 PPP3CAQ08209 521 aa12.68□□□□□ -0.38
LSM6-204ENST00000504181 TRA2AQ13595 282 aaKnown RBP eCLIP12.68□□□□□ -0.38
LSM6-204ENST00000504181 GSE1Q14687 1217 aa12.68□□□□□ -0.38
LSM6-204ENST00000504181 IRF4Q15306 451 aa12.68□□□□□ -0.38
LSM6-204ENST00000504181 LRRC73Q5JTD7 316 aa12.68□□□□□ -0.38
LSM6-204ENST00000504181 NKAIN2Q5VXU1 208 aa12.68□□□□□ -0.38
LSM6-204ENST00000504181 SPECC1LQ69YQ0 1117 aa12.68□□□□□ -0.38
LSM6-204ENST00000504181 SP5Q6BEB4 398 aaPredicted RBP12.68□□□□□ -0.38
LSM6-204ENST00000504181 FBXL22Q6P050 247 aa12.68□□□□□ -0.38
LSM6-204ENST00000504181 PMF1Q6P1K2 205 aa12.68□□□□□ -0.38
LSM6-204ENST00000504181 MMP21Q8N119 569 aa12.68□□□□□ -0.38
LSM6-204ENST00000504181 TTC39CQ8N584 583 aa12.68□□□□□ -0.38
LSM6-204ENST00000504181 GOLGA5Q8TBA6 731 aa12.68□□□□□ -0.38
LSM6-204ENST00000504181 SPOCK2Q92563 424 aa12.68□□□□□ -0.38
LSM6-204ENST00000504181 FAM149B1Q96BN6 582 aa12.68□□□□□ -0.38
LSM6-204ENST00000504181 LURAP1Q96LR2 239 aa12.68□□□□□ -0.38
LSM6-204ENST00000504181 TEFMQ96QE5 360 aaKnown RBP12.68□□□□□ -0.38
LSM6-204ENST00000504181 HEPHQ9BQS7 1158 aa12.68□□□□□ -0.38
LSM6-204ENST00000504181 MFRPQ9BY79 579 aa12.68□□□□□ -0.38
LSM6-204ENST00000504181 TRIM55Q9BYV6 548 aa12.68□□□□□ -0.38
LSM6-204ENST00000504181 LRRC27Q9C0I9 530 aa12.68□□□□□ -0.38
LSM6-204ENST00000504181 DPEP2Q9H4A9 486 aa12.68□□□□□ -0.38
LSM6-204ENST00000504181 ZSCAN16Q9H4T2 348 aaPredicted RBP12.68□□□□□ -0.38
LSM6-204ENST00000504181 ZDHHC6Q9H6R6 413 aa12.68□□□□□ -0.38
LSM6-204ENST00000504181 TMEM9Q9P0T7 183 aa12.68□□□□□ -0.38
LSM6-204ENST00000504181 C16orf96A6NNT2 1141 aa12.67□□□□□ -0.38
LSM6-204ENST00000504181 B4E171 279 aa12.67□□□□□ -0.38
LSM6-204ENST00000504181 MMP20O60882 483 aa12.67□□□□□ -0.38
LSM6-204ENST00000504181 TM7SF2O76062 418 aa12.67□□□□□ -0.38
LSM6-204ENST00000504181 STK17BO94768 372 aa12.67□□□□□ -0.38
LSM6-204ENST00000504181 TNFP01375 233 aa12.67□□□□□ -0.38
LSM6-204ENST00000504181 THRAP10827 490 aa12.67□□□□□ -0.38
LSM6-204ENST00000504181 CD1CP29017 333 aa12.67□□□□□ -0.38
LSM6-204ENST00000504181 CASP1P29466 404 aa12.67□□□□□ -0.38
LSM6-204ENST00000504181 GGCXP38435 758 aa12.67□□□□□ -0.38
LSM6-204ENST00000504181 TSPAN7P41732 249 aa12.67□□□□□ -0.38
LSM6-204ENST00000504181 DNA2P51530 1060 aa12.67□□□□□ -0.38
LSM6-204ENST00000504181 CCNHP51946 323 aaPredicted RBP12.67□□□□□ -0.38
LSM6-204ENST00000504181 PGDP52209 483 aa12.67□□□□□ -0.38
LSM6-204ENST00000504181 NFATC4Q14934 902 aa12.67□□□□□ -0.38
LSM6-204ENST00000504181 KLHL40Q2TBA0 621 aa12.67□□□□□ -0.38
LSM6-204ENST00000504181 ZRANB3Q5FWF4 1079 aa12.67□□□□□ -0.38
LSM6-204ENST00000504181 SYPL2Q5VXT5 272 aa12.67□□□□□ -0.38
LSM6-204ENST00000504181 XYLT1Q86Y38 959 aa12.67□□□□□ -0.38
LSM6-204ENST00000504181 BMPERQ8N8U9 685 aa12.67□□□□□ -0.38
LSM6-204ENST00000504181 RAB7BQ96AH8 199 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms