RNA–Protein interactions for RNA: ENST00000503360.1

HMGB1P35-201, Transcript of high mobility group box 1 pseudogene 35, humanhuman

BASIC

Gene HMGB1P35, Length 598 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P35-201ENST00000503360 EPHA8P29322 1005 aaPredicted RBP2.58□□□□□ -2
HMGB1P35-201ENST00000503360 ABCD1P33897 745 aa2.58□□□□□ -2
HMGB1P35-201ENST00000503360 RXRGP48443 463 aa2.58□□□□□ -2
HMGB1P35-201ENST00000503360 BLKP51451 505 aa2.58□□□□□ -2
HMGB1P35-201ENST00000503360 CLCNKBP51801 687 aa2.58□□□□□ -2
HMGB1P35-201ENST00000503360 PGGT1BP53609 377 aa2.58□□□□□ -2
HMGB1P35-201ENST00000503360 TMPRSS3P57727 454 aa2.58□□□□□ -2
HMGB1P35-201ENST00000503360 HILS1P60008 231 aa2.58□□□□□ -2
HMGB1P35-201ENST00000503360 CYP4A11Q02928 519 aa2.58□□□□□ -2
HMGB1P35-201ENST00000503360 PKP1Q13835 747 aa2.58□□□□□ -2
HMGB1P35-201ENST00000503360 KRT32Q14532 448 aa2.58□□□□□ -2
HMGB1P35-201ENST00000503360 HAUS3Q68CZ6 603 aa2.58□□□□□ -2
HMGB1P35-201ENST00000503360 TMEM81Q6P7N7 255 aa2.58□□□□□ -2
HMGB1P35-201ENST00000503360 ZNF549Q6P9A3 640 aa2.58□□□□□ -2
HMGB1P35-201ENST00000503360 INO80CQ6PI98 192 aaPredicted RBP2.58□□□□□ -2
HMGB1P35-201ENST00000503360 COLCA1Q6ZS62 124 aa2.58□□□□□ -2
HMGB1P35-201ENST00000503360 KDELC2Q7Z4H8 507 aa2.58□□□□□ -2
HMGB1P35-201ENST00000503360 CPLX4Q7Z7G2 160 aa2.58□□□□□ -2
HMGB1P35-201ENST00000503360 TADA2BQ86TJ2 420 aa2.58□□□□□ -2
HMGB1P35-201ENST00000503360 FAM160B2Q86V87 743 aa2.58□□□□□ -2
HMGB1P35-201ENST00000503360 DIS3L2Q8IYB7 885 aaKnown RBP2.58□□□□□ -2
HMGB1P35-201ENST00000503360 FAM9BQ8IZU0 186 aa2.58□□□□□ -2
HMGB1P35-201ENST00000503360 FAM185AQ8N0U4 392 aa2.58□□□□□ -2
HMGB1P35-201ENST00000503360 CNTROBQ8N137 903 aa2.58□□□□□ -2
HMGB1P35-201ENST00000503360 PDILTQ8N807 584 aa2.58□□□□□ -2
HMGB1P35-201ENST00000503360 LRRC57Q8N9N7 239 aa2.58□□□□□ -2
HMGB1P35-201ENST00000503360 RASSF8Q8NHQ8 419 aa2.58□□□□□ -2
HMGB1P35-201ENST00000503360 CENPIQ92674 756 aaPredicted RBP2.58□□□□□ -2
HMGB1P35-201ENST00000503360 ATOH1Q92858 354 aaPredicted RBP2.58□□□□□ -2
HMGB1P35-201ENST00000503360 KLHL15Q96M94 604 aa2.58□□□□□ -2
HMGB1P35-201ENST00000503360 DOCK7Q96N67 2140 aa2.58□□□□□ -2
HMGB1P35-201ENST00000503360 NR1H4Q96RI1 486 aaPredicted RBP2.58□□□□□ -2
HMGB1P35-201ENST00000503360 WDR83Q9BRX9 315 aaKnown RBP2.58□□□□□ -2
HMGB1P35-201ENST00000503360 HEMGNQ9BXL5 484 aa2.58□□□□□ -2
HMGB1P35-201ENST00000503360 PNRC2Q9NPJ4 139 aaKnown RBP2.58□□□□□ -2
HMGB1P35-201ENST00000503360 SNTG1Q9NSN8 517 aa2.58□□□□□ -2
HMGB1P35-201ENST00000503360 TAS2R10Q9NYW0 307 aa2.58□□□□□ -2
HMGB1P35-201ENST00000503360 MSRB1Q9NZV6 116 aa2.58□□□□□ -2
HMGB1P35-201ENST00000503360 MPP6Q9NZW5 540 aa2.58□□□□□ -2
HMGB1P35-201ENST00000503360 ORC3Q9UBD5 711 aaPredicted RBP2.58□□□□□ -2
HMGB1P35-201ENST00000503360 HSPB7Q9UBY9 170 aa2.58□□□□□ -2
HMGB1P35-201ENST00000503360 ERRFI1Q9UJM3 462 aaPredicted RBP2.58□□□□□ -2
HMGB1P35-201ENST00000503360 FBXO2Q9UK22 296 aaPredicted RBP2.58□□□□□ -2
HMGB1P35-201ENST00000503360 COG5Q9UP83 839 aa2.58□□□□□ -2
HMGB1P35-201ENST00000503360 ZSCAN21Q9Y5A6 473 aaPredicted RBP2.58□□□□□ -2
HMGB1P35-201ENST00000503360 PCDHGB5Q9Y5G0 923 aa2.58□□□□□ -2
HMGB1P35-201ENST00000503360 ITIH6Q6UXX5 1313 aa2.58□□□□□ -2
HMGB1P35-201ENST00000503360 KIF26BQ2KJY2 2108 aa2.57□□□□□ -2
HMGB1P35-201ENST00000503360 A0A087X0M5 115 aa2.57□□□□□ -2
HMGB1P35-201ENST00000503360 A0A0G2JK05 382 aa2.57□□□□□ -2
HMGB1P35-201ENST00000503360 A0A1B0GX30 115 aa2.57□□□□□ -2
HMGB1P35-201ENST00000503360 C17orf102A2RUQ5 167 aa2.57□□□□□ -2
HMGB1P35-201ENST00000503360 ZNF814B7Z6K7 855 aa2.57□□□□□ -2
HMGB1P35-201ENST00000503360 TLX3O43711 291 aaPredicted RBP2.57□□□□□ -2
HMGB1P35-201ENST00000503360 BAIAP3O94812 1187 aa2.57□□□□□ -2
HMGB1P35-201ENST00000503360 TMEM63AO94886 807 aa2.57□□□□□ -2
HMGB1P35-201ENST00000503360 IGKV3-20P01619 116 aa2.57□□□□□ -2
HMGB1P35-201ENST00000503360 LDHCP07864 332 aa2.57□□□□□ -2
HMGB1P35-201ENST00000503360 HSPA1AP0DMV8 641 aaKnown RBP2.57□□□□□ -2
HMGB1P35-201ENST00000503360 HSPA1BP0DMV9 641 aaKnown RBP2.57□□□□□ -2
HMGB1P35-201ENST00000503360 SLC2A4P14672 509 aa2.57□□□□□ -2
HMGB1P35-201ENST00000503360 CAPN3P20807 821 aa2.57□□□□□ -2
HMGB1P35-201ENST00000503360 CHMP24386 653 aa2.57□□□□□ -2
HMGB1P35-201ENST00000503360 POU1F1P28069 291 aa2.57□□□□□ -2
HMGB1P35-201ENST00000503360 FMO4P31512 558 aa2.57□□□□□ -2
HMGB1P35-201ENST00000503360 TNFSF8P32971 234 aa2.57□□□□□ -2
HMGB1P35-201ENST00000503360 RFC1P35251 1148 aaPredicted RBP2.57□□□□□ -2
HMGB1P35-201ENST00000503360 CTCFP49711 727 aaPredicted RBP2.57□□□□□ -2
HMGB1P35-201ENST00000503360 YWHAZP63104 245 aaKnown RBP2.57□□□□□ -2
HMGB1P35-201ENST00000503360 POU5F1Q01860 360 aaKnown RBP2.57□□□□□ -2
HMGB1P35-201ENST00000503360 SLC18A2Q05940 514 aa2.57□□□□□ -2
HMGB1P35-201ENST00000503360 NEXNQ0ZGT2 675 aa2.57□□□□□ -2
HMGB1P35-201ENST00000503360 MTX1Q13505 466 aa2.57□□□□□ -2
HMGB1P35-201ENST00000503360 DCTN2Q13561 401 aaKnown RBP2.57□□□□□ -2
HMGB1P35-201ENST00000503360 TAF11Q15544 211 aa2.57□□□□□ -2
HMGB1P35-201ENST00000503360 TBCEQ15813 527 aaPredicted RBP2.57□□□□□ -2
HMGB1P35-201ENST00000503360 ZNF585BQ52M93 769 aa2.57□□□□□ -2
HMGB1P35-201ENST00000503360 HYIQ5T013 277 aa2.57□□□□□ -2
HMGB1P35-201ENST00000503360 GPATCH4Q5T3I0 446 aaKnown RBP2.57□□□□□ -2
HMGB1P35-201ENST00000503360 SERTAD4-AS1Q5TG53 156 aa2.57□□□□□ -2
HMGB1P35-201ENST00000503360 ASPHD1Q5U4P2 390 aa2.57□□□□□ -2
HMGB1P35-201ENST00000503360 CAPRIN2Q6IMN6 1127 aaKnown RBP2.57□□□□□ -2
HMGB1P35-201ENST00000503360 SERPINA11Q86U17 422 aa2.57□□□□□ -2
HMGB1P35-201ENST00000503360 GPAT4Q86UL3 456 aa2.57□□□□□ -2
HMGB1P35-201ENST00000503360 GPSM1Q86YR5 675 aa2.57□□□□□ -2
HMGB1P35-201ENST00000503360 FAM217AQ8IXS0 508 aa2.57□□□□□ -2
HMGB1P35-201ENST00000503360 HORMAD2Q8N7B1 307 aa2.57□□□□□ -2
HMGB1P35-201ENST00000503360 C11orf65Q8NCR3 313 aa2.57□□□□□ -2
HMGB1P35-201ENST00000503360 ZNF548Q8NEK5 533 aaPredicted RBP2.57□□□□□ -2
HMGB1P35-201ENST00000503360 OR4N2Q8NGD1 307 aa2.57□□□□□ -2
HMGB1P35-201ENST00000503360 METTL6Q8TCB7 284 aa2.57□□□□□ -2
HMGB1P35-201ENST00000503360 TMEM174Q8WUU8 243 aa2.57□□□□□ -2
HMGB1P35-201ENST00000503360 TMEM170AQ8WVE7 144 aa2.57□□□□□ -2
HMGB1P35-201ENST00000503360 KLHL29Q96CT2 875 aa2.57□□□□□ -2
HMGB1P35-201ENST00000503360 MSI2Q96DH6 328 aaKnown RBP2.57□□□□□ -2
HMGB1P35-201ENST00000503360 SAAL1Q96ER3 474 aa2.57□□□□□ -2
HMGB1P35-201ENST00000503360 B3GNT4Q9C0J1 378 aa2.57□□□□□ -2
HMGB1P35-201ENST00000503360 WDR6Q9NNW5 1121 aaKnown RBP2.57□□□□□ -2
HMGB1P35-201ENST00000503360 RNF146Q9NTX7 359 aa2.57□□□□□ -2
HMGB1P35-201ENST00000503360 ZBTB40Q9NUA8 1239 aa2.57□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms