RNA–Protein interactions for RNA: ENST00000502971.5

PTPN13-205, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

TSL 1 (best) BASIC

Gene PTPN13, Length 1,708 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-205ENST00000502971 FAM167BQ9BTA0 163 aa22.21■■□□□ 1.15
PTPN13-205ENST00000502971 NOD2Q9HC29 1040 aa22.21■■□□□ 1.15
PTPN13-205ENST00000502971 SCUBE2Q9NQ36 999 aa22.21■■□□□ 1.15
PTPN13-205ENST00000502971 SLC2A6Q9UGQ3 507 aa22.21■■□□□ 1.15
PTPN13-205ENST00000502971 MSRAQ9UJ68 235 aa22.21■■□□□ 1.15
PTPN13-205ENST00000502971 ARIH1Q9Y4X5 557 aaPredicted RBP22.21■■□□□ 1.15
PTPN13-205ENST00000502971 ATXN2Q99700 1313 aaKnown RBP22.2■■□□□ 1.15
PTPN13-205ENST00000502971 E2F8A0AVK6 867 aa22.2■■□□□ 1.14
PTPN13-205ENST00000502971 MROH6A6NGR9 719 aa22.2■■□□□ 1.14
PTPN13-205ENST00000502971 GJB3O75712 270 aa22.2■■□□□ 1.14
PTPN13-205ENST00000502971 NDST3O95803 873 aa22.2■■□□□ 1.14
PTPN13-205ENST00000502971 ARNTP27540 789 aa22.2■■□□□ 1.14
PTPN13-205ENST00000502971 MZF1P28698 734 aaPredicted RBP22.2■■□□□ 1.14
PTPN13-205ENST00000502971 TYK2P29597 1187 aa22.2■■□□□ 1.14
PTPN13-205ENST00000502971 PDE1CQ14123 709 aaPredicted RBP22.2■■□□□ 1.14
PTPN13-205ENST00000502971 ZKSCAN8Q15776 578 aaPredicted RBP22.2■■□□□ 1.14
PTPN13-205ENST00000502971 INSCQ1MX18 579 aa22.2■■□□□ 1.14
PTPN13-205ENST00000502971 KYAT3Q6YP21 454 aaKnown RBP22.2■■□□□ 1.14
PTPN13-205ENST00000502971 MFN1Q8IWA4 741 aa22.2■■□□□ 1.14
PTPN13-205ENST00000502971 TDHQ8IZJ6 230 aa22.2■■□□□ 1.14
PTPN13-205ENST00000502971 DCAF4L2Q8NA75 395 aa22.2■■□□□ 1.14
PTPN13-205ENST00000502971 PEX13Q92968 403 aa22.2■■□□□ 1.14
PTPN13-205ENST00000502971 TASP1Q9H6P5 420 aa22.2■■□□□ 1.14
PTPN13-205ENST00000502971 DNMT3BQ9UBC3 853 aaKnown RBP22.2■■□□□ 1.14
PTPN13-205ENST00000502971 VPS28Q9UK41 221 aa22.2■■□□□ 1.14
PTPN13-205ENST00000502971 STARD13Q9Y3M8 1113 aa22.2■■□□□ 1.14
PTPN13-205ENST00000502971 RANBP2P49792 3224 aaKnown RBP22.2■■□□□ 1.14
PTPN13-205ENST00000502971 XYLBO75191 536 aa22.2■■□□□ 1.14
PTPN13-205ENST00000502971 RFPL2O75678 378 aa22.2■■□□□ 1.14
PTPN13-205ENST00000502971 MPOP05164 745 aa22.2■■□□□ 1.14
PTPN13-205ENST00000502971 MYOGP15173 224 aa22.2■■□□□ 1.14
PTPN13-205ENST00000502971 CSKP41240 450 aa22.2■■□□□ 1.14
PTPN13-205ENST00000502971 SERPINB4P48594 390 aa22.2■■□□□ 1.14
PTPN13-205ENST00000502971 SCNN1BP51168 640 aa22.2■■□□□ 1.14
PTPN13-205ENST00000502971 ERVK-21P61565 698 aa22.2■■□□□ 1.14
PTPN13-205ENST00000502971 FYB2Q5VWT5 728 aa22.2■■□□□ 1.14
PTPN13-205ENST00000502971 TRIM42Q8IWZ5 723 aa22.2■■□□□ 1.14
PTPN13-205ENST00000502971 CALML6Q8TD86 181 aa22.2■■□□□ 1.14
PTPN13-205ENST00000502971 PTPRN2Q92932 1015 aa22.2■■□□□ 1.14
PTPN13-205ENST00000502971 ALG14Q96F25 216 aa22.2■■□□□ 1.14
PTPN13-205ENST00000502971 TRIB3Q96RU7 358 aa22.2■■□□□ 1.14
PTPN13-205ENST00000502971 RHOJQ9H4E5 214 aa22.2■■□□□ 1.14
PTPN13-205ENST00000502971 MANSC1Q9H8J5 431 aa22.2■■□□□ 1.14
PTPN13-205ENST00000502971 SNX15Q9NRS6 342 aa22.2■■□□□ 1.14
PTPN13-205ENST00000502971 DPP7Q9UHL4 492 aa22.2■■□□□ 1.14
PTPN13-205ENST00000502971 MYLKQ15746 1914 aa22.19■■□□□ 1.14
PTPN13-205ENST00000502971 WDR91A4D1P6 747 aa22.19■■□□□ 1.14
PTPN13-205ENST00000502971 GOLGA8TH3BQL2 631 aa22.19■■□□□ 1.14
PTPN13-205ENST00000502971 SNAP91O60641 907 aa22.19■■□□□ 1.14
PTPN13-205ENST00000502971 TMCC1O94876 653 aa22.19■■□□□ 1.14
PTPN13-205ENST00000502971 ARHGEF15O94989 841 aa22.19■■□□□ 1.14
PTPN13-205ENST00000502971 CD160O95971 181 aa22.19■■□□□ 1.14
PTPN13-205ENST00000502971 RHOP08100 348 aa22.19■■□□□ 1.14
PTPN13-205ENST00000502971 AVPR1AP37288 418 aa22.19■■□□□ 1.14
PTPN13-205ENST00000502971 RGRP47804 291 aa22.19■■□□□ 1.14
PTPN13-205ENST00000502971 POLD2P49005 469 aa22.19■■□□□ 1.14
PTPN13-205ENST00000502971 NSUN2Q08J23 767 aaKnown RBP eCLIP22.19■■□□□ 1.14
PTPN13-205ENST00000502971 RNF43Q68DV7 783 aa22.19■■□□□ 1.14
PTPN13-205ENST00000502971 ZC3HC1Q86WB0 502 aaKnown RBP22.19■■□□□ 1.14
PTPN13-205ENST00000502971 CMTM8Q8IZV2 173 aa22.19■■□□□ 1.14
PTPN13-205ENST00000502971 TTC16Q8NEE8 873 aa22.19■■□□□ 1.14
PTPN13-205ENST00000502971 SPOCK2Q92563 424 aa22.19■■□□□ 1.14
PTPN13-205ENST00000502971 VPS39Q96JC1 886 aa22.19■■□□□ 1.14
PTPN13-205ENST00000502971 PBX4Q9BYU1 374 aa22.19■■□□□ 1.14
PTPN13-205ENST00000502971 PHTF1Q9UMS5 762 aa22.19■■□□□ 1.14
PTPN13-205ENST00000502971 MTO1Q9Y2Z2 717 aaKnown RBP22.19■■□□□ 1.14
PTPN13-205ENST00000502971 USP15Q9Y4E8 981 aaPredicted RBP22.19■■□□□ 1.14
PTPN13-205ENST00000502971 EDF1O60869 148 aaKnown RBP22.18■■□□□ 1.14
PTPN13-205ENST00000502971 MOSPD3O75425 235 aa22.18■■□□□ 1.14
PTPN13-205ENST00000502971 EPCAMP16422 314 aa22.18■■□□□ 1.14
PTPN13-205ENST00000502971 TEAD2Q15562 447 aa22.18■■□□□ 1.14
PTPN13-205ENST00000502971 KIAA0408Q6ZU52 694 aa22.18■■□□□ 1.14
PTPN13-205ENST00000502971 FAM47EQ6ZV65 393 aa22.18■■□□□ 1.14
PTPN13-205ENST00000502971 SPATA21Q7Z572 469 aa22.18■■□□□ 1.14
PTPN13-205ENST00000502971 SPRED2Q7Z698 418 aa22.18■■□□□ 1.14
PTPN13-205ENST00000502971 YTHDF3Q7Z739 585 aaKnown RBP22.18■■□□□ 1.14
PTPN13-205ENST00000502971 SH3RF2Q8TEC5 729 aa22.18■■□□□ 1.14
PTPN13-205ENST00000502971 GPR22Q99680 433 aa22.18■■□□□ 1.14
PTPN13-205ENST00000502971 RIMKLBQ9ULI2 386 aa22.18■■□□□ 1.14
PTPN13-205ENST00000502971 GBF1Q92538 1859 aa22.18■■□□□ 1.14
PTPN13-205ENST00000502971 SLC7A4O43246 635 aa22.17■■□□□ 1.14
PTPN13-205ENST00000502971 CYBBP04839 570 aa22.17■■□□□ 1.14
PTPN13-205ENST00000502971 POU2F2P09086 479 aa22.17■■□□□ 1.14
PTPN13-205ENST00000502971 MLLT1Q03111 559 aaPredicted RBP22.17■■□□□ 1.14
PTPN13-205ENST00000502971 DBN1Q16643 649 aa22.17■■□□□ 1.14
PTPN13-205ENST00000502971 RALGPS1Q5JS13 557 aa22.17■■□□□ 1.14
PTPN13-205ENST00000502971 NEPROQ6NW34 567 aa22.17■■□□□ 1.14
PTPN13-205ENST00000502971 C2CD4AQ8NCU7 369 aaPredicted RBP22.17■■□□□ 1.14
PTPN13-205ENST00000502971 ARMC2Q8NEN0 867 aa22.17■■□□□ 1.14
PTPN13-205ENST00000502971 FIBINQ8TAL6 211 aa22.17■■□□□ 1.14
PTPN13-205ENST00000502971 WFDC5Q8TCV5 224 aa22.17■■□□□ 1.14
PTPN13-205ENST00000502971 BRSK1Q8TDC3 778 aa22.17■■□□□ 1.14
PTPN13-205ENST00000502971 TCEAL4Q96EI5 215 aa22.17■■□□□ 1.14
PTPN13-205ENST00000502971 C2orf49Q9BVC5 232 aaPredicted RBP22.17■■□□□ 1.14
PTPN13-205ENST00000502971 ZDHHC7Q9NXF8 308 aa22.17■■□□□ 1.14
PTPN13-205ENST00000502971 KIAA1522Q9P206 1035 aaPredicted RBP22.17■■□□□ 1.14
PTPN13-205ENST00000502971 VPS51Q9UID3 782 aa22.17■■□□□ 1.14
PTPN13-205ENST00000502971 ZMYM5Q9UJ78 669 aa22.17■■□□□ 1.14
PTPN13-205ENST00000502971 YBX2Q9Y2T7 364 aaKnown RBP22.17■■□□□ 1.14
PTPN13-205ENST00000502971 HELZP42694 1942 aaKnown RBP22.17■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms