RNA–Protein interactions for RNA: ENST00000502948.1

LSM3P4-201, Transcript of LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated pseudogene 4, humanhuman

BASIC

Gene LSM3P4, Length 309 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3P4-201ENST00000502948 TNFRSF10CO14798 259 aa6.18□□□□□ -1.42
LSM3P4-201ENST00000502948 YY2O15391 372 aa6.18□□□□□ -1.42
LSM3P4-201ENST00000502948 FGF10O15520 208 aaPredicted RBP6.18□□□□□ -1.42
LSM3P4-201ENST00000502948 GADD45BO75293 160 aaPredicted RBP6.18□□□□□ -1.42
LSM3P4-201ENST00000502948 NEBLO76041 1014 aa6.18□□□□□ -1.42
LSM3P4-201ENST00000502948 LRIG2O94898 1065 aa6.18□□□□□ -1.42
LSM3P4-201ENST00000502948 ANXA6P08133 673 aa6.18□□□□□ -1.42
LSM3P4-201ENST00000502948 C6P13671 934 aa6.18□□□□□ -1.42
LSM3P4-201ENST00000502948 CD82P27701 267 aa6.18□□□□□ -1.42
LSM3P4-201ENST00000502948 HTR1BP28222 390 aa6.18□□□□□ -1.42
LSM3P4-201ENST00000502948 IGFALSP35858 605 aa6.18□□□□□ -1.42
LSM3P4-201ENST00000502948 ABL2P42684 1182 aa6.18□□□□□ -1.42
LSM3P4-201ENST00000502948 ZNF135P52742 658 aaPredicted RBP6.18□□□□□ -1.42
LSM3P4-201ENST00000502948 HK3P52790 923 aa6.18□□□□□ -1.42
LSM3P4-201ENST00000502948 INHBCP55103 352 aa6.18□□□□□ -1.42
LSM3P4-201ENST00000502948 JAM2P57087 298 aa6.18□□□□□ -1.42
LSM3P4-201ENST00000502948 RNASE9P60153 205 aaKnown RBP6.18□□□□□ -1.42
LSM3P4-201ENST00000502948 PPARDQ03181 441 aa6.18□□□□□ -1.42
LSM3P4-201ENST00000502948 NSUN2Q08J23 767 aaKnown RBP eCLIP6.18□□□□□ -1.42
LSM3P4-201ENST00000502948 PTP4A2Q12974 167 aa6.18□□□□□ -1.42
LSM3P4-201ENST00000502948 SPIDRQ14159 915 aa6.18□□□□□ -1.42
LSM3P4-201ENST00000502948 TPD52L1Q16890 204 aaPredicted RBP6.18□□□□□ -1.42
LSM3P4-201ENST00000502948 CCDC14Q49A88 953 aa6.18□□□□□ -1.42
LSM3P4-201ENST00000502948 PRRT3Q5FWE3 981 aa6.18□□□□□ -1.42
LSM3P4-201ENST00000502948 GUSBP11Q6P575 273 aa6.18□□□□□ -1.42
LSM3P4-201ENST00000502948 BRAT1Q6PJG6 821 aa6.18□□□□□ -1.42
LSM3P4-201ENST00000502948 OGFOD3Q6PK18 319 aa6.18□□□□□ -1.42
LSM3P4-201ENST00000502948 GDPD4Q6W3E5 623 aa6.18□□□□□ -1.42
LSM3P4-201ENST00000502948 EFL1Q7Z2Z2 1120 aaKnown RBP6.18□□□□□ -1.42
LSM3P4-201ENST00000502948 TTC7BQ86TV6 843 aa6.18□□□□□ -1.42
LSM3P4-201ENST00000502948 NOP9Q86U38 636 aaKnown RBP6.18□□□□□ -1.42
LSM3P4-201ENST00000502948 FAM131BQ86XD5 332 aa6.18□□□□□ -1.42
LSM3P4-201ENST00000502948 PHF13Q86YI8 300 aaPredicted RBP6.18□□□□□ -1.42
LSM3P4-201ENST00000502948 SLC35F3Q8IY50 421 aa6.18□□□□□ -1.42
LSM3P4-201ENST00000502948 PHACTR4Q8IZ21 702 aa6.18□□□□□ -1.42
LSM3P4-201ENST00000502948 RTL3Q8N8U3 475 aaKnown RBP6.18□□□□□ -1.42
LSM3P4-201ENST00000502948 TP53I13Q8NBR0 393 aaPredicted RBP6.18□□□□□ -1.42
LSM3P4-201ENST00000502948 C3orf20Q8ND61 904 aa6.18□□□□□ -1.42
LSM3P4-201ENST00000502948 KLK6Q92876 244 aa6.18□□□□□ -1.42
LSM3P4-201ENST00000502948 TBC1D31Q96DN5 1066 aa6.18□□□□□ -1.42
LSM3P4-201ENST00000502948 TUBGCP5Q96RT8 1024 aa6.18□□□□□ -1.42
LSM3P4-201ENST00000502948 RBM15Q96T37 977 aaKnown RBP eCLIP6.18□□□□□ -1.42
LSM3P4-201ENST00000502948 SEMA3CQ99985 751 aa6.18□□□□□ -1.42
LSM3P4-201ENST00000502948 SPON2Q9BUD6 331 aa6.18□□□□□ -1.42
LSM3P4-201ENST00000502948 LRRC61Q9BV99 259 aa6.18□□□□□ -1.42
LSM3P4-201ENST00000502948 EDEM3Q9BZQ6 932 aa6.18□□□□□ -1.42
LSM3P4-201ENST00000502948 CLPBQ9H078 707 aa6.18□□□□□ -1.42
LSM3P4-201ENST00000502948 ZDHHC6Q9H6R6 413 aa6.18□□□□□ -1.42
LSM3P4-201ENST00000502948 ASH1LQ9NR48 2969 aaKnown RBP6.18□□□□□ -1.42
LSM3P4-201ENST00000502948 NDFIP2Q9NV92 336 aa6.18□□□□□ -1.42
LSM3P4-201ENST00000502948 APOBEC3BQ9UH17 382 aaKnown RBP6.18□□□□□ -1.42
LSM3P4-201ENST00000502948 APPL1Q9UKG1 709 aa6.18□□□□□ -1.42
LSM3P4-201ENST00000502948 ATXN7L1Q9ULK2 861 aaPredicted RBP6.18□□□□□ -1.42
LSM3P4-201ENST00000502948 PADI4Q9UM07 663 aa6.18□□□□□ -1.42
LSM3P4-201ENST00000502948 FCF1Q9Y324 198 aaKnown RBP6.18□□□□□ -1.42
LSM3P4-201ENST00000502948 FHOD1Q9Y613 1164 aa6.18□□□□□ -1.42
LSM3P4-201ENST00000502948 MGAQ8IWI9 3026 aa6.18□□□□□ -1.42
LSM3P4-201ENST00000502948 A0A1W2PQ67 120 aa6.17□□□□□ -1.42
LSM3P4-201ENST00000502948 TCRBV5S1A1TA0A578 114 aa6.17□□□□□ -1.42
LSM3P4-201ENST00000502948 IQCJ-SCHIP1C9J366 451 aaPredicted RBP6.17□□□□□ -1.42
LSM3P4-201ENST00000502948 FAM72CH0Y354 149 aa6.17□□□□□ -1.42
LSM3P4-201ENST00000502948 KRIT1O00522 736 aa6.17□□□□□ -1.42
LSM3P4-201ENST00000502948 NEMP1O14524 444 aa6.17□□□□□ -1.42
LSM3P4-201ENST00000502948 PLD2O14939 933 aa6.17□□□□□ -1.42
LSM3P4-201ENST00000502948 NVLO15381 856 aaKnown RBP6.17□□□□□ -1.42
LSM3P4-201ENST00000502948 KLK10O43240 276 aa6.17□□□□□ -1.42
LSM3P4-201ENST00000502948 NUDT21O43809 227 aaKnown RBP6.17□□□□□ -1.42
LSM3P4-201ENST00000502948 GCATO75600 419 aa6.17□□□□□ -1.42
LSM3P4-201ENST00000502948 TMCC1O94876 653 aa6.17□□□□□ -1.42
LSM3P4-201ENST00000502948 RASGRP1O95267 797 aa6.17□□□□□ -1.42
LSM3P4-201ENST00000502948 IGSF6O95976 241 aa6.17□□□□□ -1.42
LSM3P4-201ENST00000502948 PRB1P04280 392 aa6.17□□□□□ -1.42
LSM3P4-201ENST00000502948 CALB1P05937 261 aa6.17□□□□□ -1.42
LSM3P4-201ENST00000502948 UGT2B4P06133 528 aa6.17□□□□□ -1.42
LSM3P4-201ENST00000502948 MMEP08473 750 aa6.17□□□□□ -1.42
LSM3P4-201ENST00000502948 PLEKP08567 350 aaPredicted RBP6.17□□□□□ -1.42
LSM3P4-201ENST00000502948 SFTPCP11686 197 aa6.17□□□□□ -1.42
LSM3P4-201ENST00000502948 KRT3P12035 628 aa6.17□□□□□ -1.42
LSM3P4-201ENST00000502948 GLB1P16278 677 aa6.17□□□□□ -1.42
LSM3P4-201ENST00000502948 TSHRP16473 764 aa6.17□□□□□ -1.42
LSM3P4-201ENST00000502948 SOX5P35711 763 aa6.17□□□□□ -1.42
LSM3P4-201ENST00000502948 TRIM23P36406 574 aa6.17□□□□□ -1.42
LSM3P4-201ENST00000502948 ACVRL1P37023 503 aa6.17□□□□□ -1.42
LSM3P4-201ENST00000502948 EIF4A3P38919 411 aaKnown RBP6.17□□□□□ -1.42
LSM3P4-201ENST00000502948 DNA2P51530 1060 aa6.17□□□□□ -1.42
LSM3P4-201ENST00000502948 NDST2P52849 883 aa6.17□□□□□ -1.42
LSM3P4-201ENST00000502948 ADKP55263 362 aaKnown RBP6.17□□□□□ -1.42
LSM3P4-201ENST00000502948 HDAC4P56524 1084 aa6.17□□□□□ -1.42
LSM3P4-201ENST00000502948 KIAA1024LP59773 190 aa6.17□□□□□ -1.42
LSM3P4-201ENST00000502948 FMO1Q01740 532 aa6.17□□□□□ -1.42
LSM3P4-201ENST00000502948 MTM1Q13496 603 aa6.17□□□□□ -1.42
LSM3P4-201ENST00000502948 SERINC3Q13530 473 aa6.17□□□□□ -1.42
LSM3P4-201ENST00000502948 RAPGEF1Q13905 1077 aa6.17□□□□□ -1.42
LSM3P4-201ENST00000502948 RFTN1Q14699 578 aaPredicted RBP6.17□□□□□ -1.42
LSM3P4-201ENST00000502948 NFATC4Q14934 902 aa6.17□□□□□ -1.42
LSM3P4-201ENST00000502948 NR1D2Q14995 579 aa6.17□□□□□ -1.42
LSM3P4-201ENST00000502948 LRRC14Q15048 493 aa6.17□□□□□ -1.42
LSM3P4-201ENST00000502948 CDKN3Q16667 212 aa6.17□□□□□ -1.42
LSM3P4-201ENST00000502948 UGP2Q16851 508 aa6.17□□□□□ -1.42
LSM3P4-201ENST00000502948 TAF1BQ53T94 588 aaPredicted RBP6.17□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms