RNA–Protein interactions for RNA: ENST00000502717.5

HMGXB3-201, Transcript of HMG-box containing 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene HMGXB3, Length 4,974 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-201ENST00000502717 ATG14Q6ZNE5 492 aa17.35■□□□□ 0.37
HMGXB3-201ENST00000502717 ILDR2Q71H61 639 aa17.35■□□□□ 0.37
HMGXB3-201ENST00000502717 NIPA2Q8N8Q9 360 aa17.35■□□□□ 0.37
HMGXB3-201ENST00000502717 SCAIQ8N9R8 606 aa17.35■□□□□ 0.37
HMGXB3-201ENST00000502717 ENKURQ8TC29 256 aa17.35■□□□□ 0.37
HMGXB3-201ENST00000502717 HSPBAP1Q96EW2 488 aa17.35■□□□□ 0.37
HMGXB3-201ENST00000502717 P2RY11Q96G91 374 aa17.35■□□□□ 0.37
HMGXB3-201ENST00000502717 EPB41L1Q9H4G0 881 aa17.35■□□□□ 0.37
HMGXB3-201ENST00000502717 CRNNQ9UBG3 495 aaPredicted RBP17.35■□□□□ 0.37
HMGXB3-201ENST00000502717 ATP6AP2A0A1C7CYW4 349 aa17.35■□□□□ 0.37
HMGXB3-201ENST00000502717 ATP6AP2O75787 350 aa17.35■□□□□ 0.37
HMGXB3-201ENST00000502717 GPIP06744 558 aa17.35■□□□□ 0.37
HMGXB3-201ENST00000502717 CD48P09326 243 aa17.35■□□□□ 0.37
HMGXB3-201ENST00000502717 NFKB1P19838 968 aa17.35■□□□□ 0.37
HMGXB3-201ENST00000502717 HERC3Q15034 1050 aa17.35■□□□□ 0.37
HMGXB3-201ENST00000502717 UNC93AQ86WB7 457 aa17.35■□□□□ 0.37
HMGXB3-201ENST00000502717 SPPL2CQ8IUH8 684 aa17.35■□□□□ 0.37
HMGXB3-201ENST00000502717 WNT8BQ93098 351 aa17.35■□□□□ 0.37
HMGXB3-201ENST00000502717 KCNH1O95259 989 aa17.34■□□□□ 0.37
HMGXB3-201ENST00000502717 RRM2P31350 389 aa17.34■□□□□ 0.37
HMGXB3-201ENST00000502717 TNFSF9P41273 254 aa17.34■□□□□ 0.37
HMGXB3-201ENST00000502717 RXRGP48443 463 aa17.34■□□□□ 0.37
HMGXB3-201ENST00000502717 TUBA4AP68366 448 aa17.34■□□□□ 0.37
HMGXB3-201ENST00000502717 TMEM62Q0P6H9 643 aa17.34■□□□□ 0.37
HMGXB3-201ENST00000502717 NCF4Q15080 339 aa17.34■□□□□ 0.37
HMGXB3-201ENST00000502717 PAGE2BQ5JRK9 111 aa17.34■□□□□ 0.37
HMGXB3-201ENST00000502717 MARC1Q5VT66 337 aa17.34■□□□□ 0.37
HMGXB3-201ENST00000502717 CUZD1Q86UP6 607 aa17.34■□□□□ 0.37
HMGXB3-201ENST00000502717 PTPRHQ9HD43 1115 aa17.34■□□□□ 0.37
HMGXB3-201ENST00000502717 DSEQ9UL01 958 aa17.34■□□□□ 0.37
HMGXB3-201ENST00000502717 INVSQ9Y283 1065 aa17.34■□□□□ 0.37
HMGXB3-201ENST00000502717 TRAP1Q12931 704 aaKnown RBP17.34■□□□□ 0.37
HMGXB3-201ENST00000502717 PGS1Q32NB8 556 aa17.34■□□□□ 0.37
HMGXB3-201ENST00000502717 STXBP5Q5T5C0 1151 aa17.34■□□□□ 0.37
HMGXB3-201ENST00000502717 KCTD8Q6ZWB6 473 aa17.34■□□□□ 0.37
HMGXB3-201ENST00000502717 PTGR2Q8N8N7 351 aaPredicted RBP17.34■□□□□ 0.37
HMGXB3-201ENST00000502717 PLEKHA8Q96JA3 519 aa17.34■□□□□ 0.37
HMGXB3-201ENST00000502717 HSFY1Q96LI6 401 aa17.34■□□□□ 0.37
HMGXB3-201ENST00000502717 GPR63Q9BZJ6 419 aa17.34■□□□□ 0.37
HMGXB3-201ENST00000502717 DUSP12Q9UNI6 340 aa17.34■□□□□ 0.37
HMGXB3-201ENST00000502717 COL14A1Q05707 1796 aaKnown RBP17.34■□□□□ 0.37
HMGXB3-201ENST00000502717 A0A0J9YYE9 177 aa17.34■□□□□ 0.37
HMGXB3-201ENST00000502717 EFCAB10A6NFE3 127 aa17.34■□□□□ 0.37
HMGXB3-201ENST00000502717 SNTNA6NMZ2 147 aa17.34■□□□□ 0.37
HMGXB3-201ENST00000502717 RNASEH1O60930 286 aaKnown RBP17.34■□□□□ 0.37
HMGXB3-201ENST00000502717 SLC7A1P30825 629 aa17.34■□□□□ 0.37
HMGXB3-201ENST00000502717 HOXD13P35453 343 aa17.34■□□□□ 0.37
HMGXB3-201ENST00000502717 ST8SIA6P61647 398 aa17.34■□□□□ 0.37
HMGXB3-201ENST00000502717 ATP6V0D2Q8N8Y2 350 aa17.34■□□□□ 0.37
HMGXB3-201ENST00000502717 IL31RAQ8NI17 732 aa17.34■□□□□ 0.37
HMGXB3-201ENST00000502717 TAMM41Q96BW9 452 aa17.34■□□□□ 0.37
HMGXB3-201ENST00000502717 MIPEPQ99797 713 aa17.34■□□□□ 0.37
HMGXB3-201ENST00000502717 POPDC2Q9HBU9 364 aa17.34■□□□□ 0.37
HMGXB3-201ENST00000502717 CD320Q9NPF0 282 aa17.34■□□□□ 0.37
HMGXB3-201ENST00000502717 ENOPH1Q9UHY7 261 aa17.34■□□□□ 0.37
HMGXB3-201ENST00000502717 CPA4Q9UI42 421 aa17.34■□□□□ 0.37
HMGXB3-201ENST00000502717 MAGEL2Q9UJ55 1249 aa17.34■□□□□ 0.37
HMGXB3-201ENST00000502717 GNPTGQ9UJJ9 305 aa17.34■□□□□ 0.37
HMGXB3-201ENST00000502717 TPD52L2O43399 206 aaKnown RBP17.33■□□□□ 0.37
HMGXB3-201ENST00000502717 UMPSP11172 480 aa17.33■□□□□ 0.37
HMGXB3-201ENST00000502717 POLD2P49005 469 aa17.33■□□□□ 0.37
HMGXB3-201ENST00000502717 PFKFB4Q16877 469 aa17.33■□□□□ 0.37
HMGXB3-201ENST00000502717 POTEHQ6S545 545 aa17.33■□□□□ 0.37
HMGXB3-201ENST00000502717 ZNF540Q8NDQ6 660 aa17.33■□□□□ 0.37
HMGXB3-201ENST00000502717 STAG3L4Q8TBR4 150 aa17.33■□□□□ 0.37
HMGXB3-201ENST00000502717 UTP15Q8TED0 518 aaKnown RBP17.33■□□□□ 0.37
HMGXB3-201ENST00000502717 HGH1Q9BTY7 390 aa17.33■□□□□ 0.37
HMGXB3-201ENST00000502717 RNF208Q9H0X6 261 aa17.33■□□□□ 0.37
HMGXB3-201ENST00000502717 SESN1Q9Y6P5 492 aa17.33■□□□□ 0.37
HMGXB3-201ENST00000502717 CST1P01037 141 aa17.33■□□□□ 0.37
HMGXB3-201ENST00000502717 CLCN2P51788 898 aa17.33■□□□□ 0.37
HMGXB3-201ENST00000502717 THOP1P52888 689 aa17.33■□□□□ 0.37
HMGXB3-201ENST00000502717 SPIRE1Q08AE8 756 aa17.33■□□□□ 0.37
HMGXB3-201ENST00000502717 MINDY2Q8NBR6 621 aa17.33■□□□□ 0.37
HMGXB3-201ENST00000502717 MCFD2Q8NI22 146 aa17.33■□□□□ 0.37
HMGXB3-201ENST00000502717 MCRS1Q96EZ8 462 aa17.33■□□□□ 0.37
HMGXB3-201ENST00000502717 ACOX2Q99424 681 aa17.33■□□□□ 0.37
HMGXB3-201ENST00000502717 HMX1Q9NP08 348 aaPredicted RBP17.33■□□□□ 0.37
HMGXB3-201ENST00000502717 EHD3Q9NZN3 535 aa17.33■□□□□ 0.37
HMGXB3-201ENST00000502717 PCDHB7Q9Y5E2 793 aa17.33■□□□□ 0.37
HMGXB3-201ENST00000502717 GMPPBQ9Y5P6 360 aa17.33■□□□□ 0.37
HMGXB3-201ENST00000502717 PRKG2Q13237 762 aa17.33■□□□□ 0.36
HMGXB3-201ENST00000502717 TRIQKQ629K1 86 aa17.33■□□□□ 0.36
HMGXB3-201ENST00000502717 SDE2Q6IQ49 451 aa17.33■□□□□ 0.36
HMGXB3-201ENST00000502717 SMYD1Q8NB12 490 aa17.33■□□□□ 0.36
HMGXB3-201ENST00000502717 SLC2A14Q8TDB8 520 aa17.33■□□□□ 0.36
HMGXB3-201ENST00000502717 FANCEQ9HB96 536 aa17.33■□□□□ 0.36
HMGXB3-201ENST00000502717 TBC1D30Q9Y2I9 924 aa17.33■□□□□ 0.36
HMGXB3-201ENST00000502717 C10orf71Q711Q0 1435 aa17.33■□□□□ 0.36
HMGXB3-201ENST00000502717 AZIN1O14977 448 aa17.33■□□□□ 0.36
HMGXB3-201ENST00000502717 TSC22D2O75157 780 aa17.33■□□□□ 0.36
HMGXB3-201ENST00000502717 ALDH7A1P49419 539 aaKnown RBP17.33■□□□□ 0.36
HMGXB3-201ENST00000502717 ZNF605Q86T29 641 aa17.33■□□□□ 0.36
HMGXB3-201ENST00000502717 TMEM132CQ8N3T6 1108 aa17.33■□□□□ 0.36
HMGXB3-201ENST00000502717 ARL10Q8N8L6 244 aa17.33■□□□□ 0.36
HMGXB3-201ENST00000502717 GLIS1Q8NBF1 620 aa17.33■□□□□ 0.36
HMGXB3-201ENST00000502717 UBASH3BQ8TF42 649 aa17.33■□□□□ 0.36
HMGXB3-201ENST00000502717 SOCS4Q8WXH5 440 aa17.33■□□□□ 0.36
HMGXB3-201ENST00000502717 KLK14Q9P0G3 267 aa17.33■□□□□ 0.36
HMGXB3-201ENST00000502717 FBXO5Q9UKT4 447 aa17.33■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms