RNA–Protein interactions for RNA: ENST00000502690.5

UBE2D3-213, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 4

Gene UBE2D3, Length 599 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-213ENST00000502690 TIMP2P16035 220 aa17.24■□□□□ 0.35
UBE2D3-213ENST00000502690 GEMIN4P57678 1058 aaKnown RBP17.24■□□□□ 0.35
UBE2D3-213ENST00000502690 CYTH1Q15438 398 aa17.24■□□□□ 0.35
UBE2D3-213ENST00000502690 TCEA2Q15560 299 aa17.24■□□□□ 0.35
UBE2D3-213ENST00000502690 KCTD16Q68DU8 428 aa17.24■□□□□ 0.35
UBE2D3-213ENST00000502690 ZCCHC8Q6NZY4 707 aaKnown RBP17.24■□□□□ 0.35
UBE2D3-213ENST00000502690 SCYL2Q6P3W7 929 aa17.24■□□□□ 0.35
UBE2D3-213ENST00000502690 LRRC69Q6ZNQ3 347 aa17.24■□□□□ 0.35
UBE2D3-213ENST00000502690 EFL1Q7Z2Z2 1120 aaKnown RBP17.24■□□□□ 0.35
UBE2D3-213ENST00000502690 ZNF354CQ86Y25 554 aa17.24■□□□□ 0.35
UBE2D3-213ENST00000502690 DNAAF5Q86Y56 855 aa17.24■□□□□ 0.35
UBE2D3-213ENST00000502690 TP53I13Q8NBR0 393 aaPredicted RBP17.24■□□□□ 0.35
UBE2D3-213ENST00000502690 MAPK15Q8TD08 544 aa17.24■□□□□ 0.35
UBE2D3-213ENST00000502690 ASB12Q8WXK4 309 aa17.24■□□□□ 0.35
UBE2D3-213ENST00000502690 HIC2Q96JB3 615 aa17.24■□□□□ 0.35
UBE2D3-213ENST00000502690 GDAP1L1Q96MZ0 367 aa17.24■□□□□ 0.35
UBE2D3-213ENST00000502690 DUSP23Q9BVJ7 150 aa17.24■□□□□ 0.35
UBE2D3-213ENST00000502690 OSBPL1AQ9BXW6 950 aa17.24■□□□□ 0.35
UBE2D3-213ENST00000502690 TTYH3Q9C0H2 523 aa17.24■□□□□ 0.35
UBE2D3-213ENST00000502690 CLPBQ9H078 707 aa17.24■□□□□ 0.35
UBE2D3-213ENST00000502690 SEPT11Q9NVA2 429 aaKnown RBP17.24■□□□□ 0.35
UBE2D3-213ENST00000502690 GPATCH2LQ9NWQ4 482 aa17.24■□□□□ 0.35
UBE2D3-213ENST00000502690 TAS2R14Q9NYV8 317 aa17.24■□□□□ 0.35
UBE2D3-213ENST00000502690 LIMA1Q9UHB6 759 aaKnown RBP17.24■□□□□ 0.35
UBE2D3-213ENST00000502690 IPO11Q9UI26 975 aaKnown RBP17.24■□□□□ 0.35
UBE2D3-213ENST00000502690 FZD10Q9ULW2 581 aa17.24■□□□□ 0.35
UBE2D3-213ENST00000502690 HPCAL4Q9UM19 191 aa17.24■□□□□ 0.35
UBE2D3-213ENST00000502690 CFAP46Q8IYW2 2715 aa17.23■□□□□ 0.35
UBE2D3-213ENST00000502690 SCN8AQ9UQD0 1980 aa17.23■□□□□ 0.35
UBE2D3-213ENST00000502690 CPED1A4D0V7 1026 aa17.23■□□□□ 0.35
UBE2D3-213ENST00000502690 RRP8O43159 456 aaKnown RBP17.23■□□□□ 0.35
UBE2D3-213ENST00000502690 CALB1P05937 261 aa17.23■□□□□ 0.35
UBE2D3-213ENST00000502690 ACTN2P35609 894 aa17.23■□□□□ 0.35
UBE2D3-213ENST00000502690 RGRP47804 291 aa17.23■□□□□ 0.35
UBE2D3-213ENST00000502690 ZNF143P52747 638 aaPredicted RBP17.23■□□□□ 0.35
UBE2D3-213ENST00000502690 RHOAP61586 193 aa17.23■□□□□ 0.35
UBE2D3-213ENST00000502690 SERINC3Q13530 473 aa17.23■□□□□ 0.35
UBE2D3-213ENST00000502690 NCAPHQ15003 741 aa17.23■□□□□ 0.35
UBE2D3-213ENST00000502690 IRF4Q15306 451 aa17.23■□□□□ 0.35
UBE2D3-213ENST00000502690 EFHC2Q5JST6 749 aa17.23■□□□□ 0.35
UBE2D3-213ENST00000502690 DNAJC24Q6P3W2 148 aa17.23■□□□□ 0.35
UBE2D3-213ENST00000502690 PCSK4Q6UW60 755 aa17.23■□□□□ 0.35
UBE2D3-213ENST00000502690 TTC7BQ86TV6 843 aa17.23■□□□□ 0.35
UBE2D3-213ENST00000502690 ZSWIM9Q86XI8 627 aa17.23■□□□□ 0.35
UBE2D3-213ENST00000502690 SLC35F3Q8IY50 421 aa17.23■□□□□ 0.35
UBE2D3-213ENST00000502690 PHACTR4Q8IZ21 702 aa17.23■□□□□ 0.35
UBE2D3-213ENST00000502690 NEK11Q8NG66 645 aa17.23■□□□□ 0.35
UBE2D3-213ENST00000502690 DEPDC7Q96QD5 511 aa17.23■□□□□ 0.35
UBE2D3-213ENST00000502690 UBL7Q96S82 380 aaPredicted RBP17.23■□□□□ 0.35
UBE2D3-213ENST00000502690 EPAS1Q99814 870 aa17.23■□□□□ 0.35
UBE2D3-213ENST00000502690 AGPAT1Q99943 283 aa17.23■□□□□ 0.35
UBE2D3-213ENST00000502690 BOCQ9BWV1 1114 aa17.23■□□□□ 0.35
UBE2D3-213ENST00000502690 RETREG1Q9H6L5 497 aa17.23■□□□□ 0.35
UBE2D3-213ENST00000502690 PDFQ9HBH1 243 aa17.23■□□□□ 0.35
UBE2D3-213ENST00000502690 ASCL3Q9NQ33 180 aa17.23■□□□□ 0.35
UBE2D3-213ENST00000502690 APOBEC3BQ9UH17 382 aaKnown RBP17.23■□□□□ 0.35
UBE2D3-213ENST00000502690 CSNK1G3Q9Y6M4 447 aa17.23■□□□□ 0.35
UBE2D3-213ENST00000502690 HELZ2Q9BYK8 2649 aaKnown RBP17.23■□□□□ 0.35
UBE2D3-213ENST00000502690 EIF4E1BA6NMX2 242 aaKnown RBP17.22■□□□□ 0.35
UBE2D3-213ENST00000502690 H3BM21 787 aa17.22■□□□□ 0.35
UBE2D3-213ENST00000502690 J3KR12 359 aa17.22■□□□□ 0.35
UBE2D3-213ENST00000502690 ATMINO43313 823 aaPredicted RBP17.22■□□□□ 0.35
UBE2D3-213ENST00000502690 LZTS3O60299 673 aaPredicted RBP17.22■□□□□ 0.35
UBE2D3-213ENST00000502690 IGSF6O95976 241 aa17.22■□□□□ 0.35
UBE2D3-213ENST00000502690 PRKCGP05129 697 aa17.22■□□□□ 0.35
UBE2D3-213ENST00000502690 ATP1A3P13637 1013 aa17.22■□□□□ 0.35
UBE2D3-213ENST00000502690 PDX1P52945 283 aa17.22■□□□□ 0.35
UBE2D3-213ENST00000502690 CA9Q16790 459 aa17.22■□□□□ 0.35
UBE2D3-213ENST00000502690 ISXQ2M1V0 245 aa17.22■□□□□ 0.35
UBE2D3-213ENST00000502690 KLHL40Q2TBA0 621 aa17.22■□□□□ 0.35
UBE2D3-213ENST00000502690 PRRT3Q5FWE3 981 aa17.22■□□□□ 0.35
UBE2D3-213ENST00000502690 ATXN7L3BQ96GX2 97 aa17.22■□□□□ 0.35
UBE2D3-213ENST00000502690 CELF6Q96J87 481 aaKnown RBP17.22■□□□□ 0.35
UBE2D3-213ENST00000502690 PCMTD1Q96MG8 357 aaPredicted RBP17.22■□□□□ 0.35
UBE2D3-213ENST00000502690 PEBP4Q96S96 227 aa17.22■□□□□ 0.35
UBE2D3-213ENST00000502690 SYT11Q9BT88 431 aa17.22■□□□□ 0.35
UBE2D3-213ENST00000502690 LRRC19Q9H756 370 aa17.22■□□□□ 0.35
UBE2D3-213ENST00000502690 USP29Q9HBJ7 922 aa17.22■□□□□ 0.35
UBE2D3-213ENST00000502690 MFHAS1Q9Y4C4 1052 aa17.22■□□□□ 0.35
UBE2D3-213ENST00000502690 EME2A4GXA9 379 aaPredicted RBP17.21■□□□□ 0.35
UBE2D3-213ENST00000502690 ZSCAN5CA6NGD5 496 aaPredicted RBP17.21■□□□□ 0.35
UBE2D3-213ENST00000502690 WASH4PA8MWX3 477 aa17.21■□□□□ 0.35
UBE2D3-213ENST00000502690 GOLGA6L22H0YM25 854 aa17.21■□□□□ 0.35
UBE2D3-213ENST00000502690 MUSKO15146 869 aa17.21■□□□□ 0.35
UBE2D3-213ENST00000502690 BUB1BO60566 1050 aaPredicted RBP17.21■□□□□ 0.35
UBE2D3-213ENST00000502690 TM7SF2O76062 418 aa17.21■□□□□ 0.35
UBE2D3-213ENST00000502690 TSHRP16473 764 aa17.21■□□□□ 0.35
UBE2D3-213ENST00000502690 DUSP3P51452 185 aaPredicted RBP17.21■□□□□ 0.35
UBE2D3-213ENST00000502690 THOP1P52888 689 aa17.21■□□□□ 0.35
UBE2D3-213ENST00000502690 ADKP55263 362 aaKnown RBP17.21■□□□□ 0.35
UBE2D3-213ENST00000502690 MYL5Q02045 173 aa17.21■□□□□ 0.35
UBE2D3-213ENST00000502690 UBXN1Q04323 297 aa17.21■□□□□ 0.35
UBE2D3-213ENST00000502690 INO80DQ53TQ3 878 aaPredicted RBP17.21■□□□□ 0.35
UBE2D3-213ENST00000502690 C3orf38Q5JPI3 329 aa17.21■□□□□ 0.35
UBE2D3-213ENST00000502690 MACC1Q6ZN28 852 aa17.21■□□□□ 0.35
UBE2D3-213ENST00000502690 ZSCAN30Q86W11 494 aa17.21■□□□□ 0.35
UBE2D3-213ENST00000502690 UMODL1-AS1Q8N2C9 162 aa17.21■□□□□ 0.35
UBE2D3-213ENST00000502690 ARFGAP1Q8N6T3 406 aa17.21■□□□□ 0.35
UBE2D3-213ENST00000502690 CXorf40AQ8TE69 158 aa17.21■□□□□ 0.35
UBE2D3-213ENST00000502690 FUBP1Q96AE4 644 aaKnown RBP17.21■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms