RNA–Protein interactions for RNA: ENST00000498739.1

PRKCB-210, Transcript of protein kinase C beta, humanhuman

TSL 4

Gene PRKCB, Length 569 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-210ENST00000498739 TNRC6BQ9UPQ9 1833 aaKnown RBP16.94■□□□□ 0.3
PRKCB-210ENST00000498739 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP16.94■□□□□ 0.3
PRKCB-210ENST00000498739 PATE3B3GLJ2 98 aa16.94■□□□□ 0.3
PRKCB-210ENST00000498739 APOC4-APOC2K7ER74 178 aa16.94■□□□□ 0.3
PRKCB-210ENST00000498739 RNGTTO60942 597 aaKnown RBP16.94■□□□□ 0.3
PRKCB-210ENST00000498739 PCDH8O95206 1070 aa16.94■□□□□ 0.3
PRKCB-210ENST00000498739 APOC2P02655 101 aa16.94■□□□□ 0.3
PRKCB-210ENST00000498739 ZNF806P0C7X5 589 aa16.94■□□□□ 0.3
PRKCB-210ENST00000498739 CR2P20023 1033 aa16.94■□□□□ 0.3
PRKCB-210ENST00000498739 TGM1P22735 817 aa16.94■□□□□ 0.3
PRKCB-210ENST00000498739 XPAP23025 273 aaPredicted RBP16.94■□□□□ 0.3
PRKCB-210ENST00000498739 MAT2AP31153 395 aaKnown RBP16.94■□□□□ 0.3
PRKCB-210ENST00000498739 HOXD12P35452 270 aa16.94■□□□□ 0.3
PRKCB-210ENST00000498739 CCR5P51681 352 aa16.94■□□□□ 0.3
PRKCB-210ENST00000498739 ZBTB17Q13105 803 aa16.94■□□□□ 0.3
PRKCB-210ENST00000498739 SF3A2Q15428 464 aaKnown RBP16.94■□□□□ 0.3
PRKCB-210ENST00000498739 LRRC73Q5JTD7 316 aa16.94■□□□□ 0.3
PRKCB-210ENST00000498739 TCEAL6Q6IPX3 200 aa16.94■□□□□ 0.3
PRKCB-210ENST00000498739 TTC7BQ86TV6 843 aa16.94■□□□□ 0.3
PRKCB-210ENST00000498739 ZC3H18Q86VM9 953 aaKnown RBP16.94■□□□□ 0.3
PRKCB-210ENST00000498739 KIAA2013Q8IYS2 634 aa16.94■□□□□ 0.3
PRKCB-210ENST00000498739 ZCCHC9Q8N567 271 aaKnown RBP16.94■□□□□ 0.3
PRKCB-210ENST00000498739 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP16.94■□□□□ 0.3
PRKCB-210ENST00000498739 GPR161Q8N6U8 529 aaKnown RBP16.94■□□□□ 0.3
PRKCB-210ENST00000498739 C12orf50Q8NA57 414 aaPredicted RBP16.94■□□□□ 0.3
PRKCB-210ENST00000498739 TRIM58Q8NG06 486 aa16.94■□□□□ 0.3
PRKCB-210ENST00000498739 TCEAL3Q969E4 200 aa16.94■□□□□ 0.3
PRKCB-210ENST00000498739 NSMCE3Q96MG7 304 aa16.94■□□□□ 0.3
PRKCB-210ENST00000498739 NOD2Q9HC29 1040 aa16.94■□□□□ 0.3
PRKCB-210ENST00000498739 DKK3Q9UBP4 350 aa16.94■□□□□ 0.3
PRKCB-210ENST00000498739 SUSD2Q9UGT4 822 aa16.94■□□□□ 0.3
PRKCB-210ENST00000498739 FADS3Q9Y5Q0 445 aa16.94■□□□□ 0.3
PRKCB-210ENST00000498739 VPS13AQ96RL7 3174 aa16.93■□□□□ 0.3
PRKCB-210ENST00000498739 ABCA7Q8IZY2 2146 aa16.93■□□□□ 0.3
PRKCB-210ENST00000498739 NEMP1O14524 444 aa16.93■□□□□ 0.3
PRKCB-210ENST00000498739 ZSCAN12O43309 604 aa16.93■□□□□ 0.3
PRKCB-210ENST00000498739 TJP3O95049 919 aa16.93■□□□□ 0.3
PRKCB-210ENST00000498739 JCHAINP01591 159 aa16.93■□□□□ 0.3
PRKCB-210ENST00000498739 CFIP05156 583 aa16.93■□□□□ 0.3
PRKCB-210ENST00000498739 HLA-DQB2P05538 268 aa16.93■□□□□ 0.3
PRKCB-210ENST00000498739 GNSP15586 552 aa16.93■□□□□ 0.3
PRKCB-210ENST00000498739 CD27P26842 260 aa16.93■□□□□ 0.3
PRKCB-210ENST00000498739 HOXD11P31277 338 aaPredicted RBP16.93■□□□□ 0.3
PRKCB-210ENST00000498739 IFI35P80217 286 aaPredicted RBP16.93■□□□□ 0.3
PRKCB-210ENST00000498739 CCDC173Q0VFZ6 552 aa16.93■□□□□ 0.3
PRKCB-210ENST00000498739 DUOXA1Q1HG43 343 aa16.93■□□□□ 0.3
PRKCB-210ENST00000498739 TRIM61Q5EBN2 209 aa16.93■□□□□ 0.3
PRKCB-210ENST00000498739 RALGPS1Q5JS13 557 aa16.93■□□□□ 0.3
PRKCB-210ENST00000498739 MEI1Q5TIA1 1274 aa16.93■□□□□ 0.3
PRKCB-210ENST00000498739 PRR23CQ6ZRP0 262 aa16.93■□□□□ 0.3
PRKCB-210ENST00000498739 RABEPKQ7Z6M1 372 aa16.93■□□□□ 0.3
PRKCB-210ENST00000498739 TRIM69Q86WT6 500 aa16.93■□□□□ 0.3
PRKCB-210ENST00000498739 HCAR2Q8TDS4 363 aa16.93■□□□□ 0.3
PRKCB-210ENST00000498739 TFB1MQ8WVM0 346 aaKnown RBP16.93■□□□□ 0.3
PRKCB-210ENST00000498739 UBE2Q2Q8WVN8 375 aa16.93■□□□□ 0.3
PRKCB-210ENST00000498739 RAB7BQ96AH8 199 aa16.93■□□□□ 0.3
PRKCB-210ENST00000498739 SEMA3CQ99985 751 aa16.93■□□□□ 0.3
PRKCB-210ENST00000498739 CEP41Q9BYV8 373 aa16.93■□□□□ 0.3
PRKCB-210ENST00000498739 AMACRQ9UHK6 382 aa16.93■□□□□ 0.3
PRKCB-210ENST00000498739 ITM2BQ9Y287 266 aa16.93■□□□□ 0.3
PRKCB-210ENST00000498739 DYNC1LI1Q9Y6G9 523 aaKnown RBP16.93■□□□□ 0.3
PRKCB-210ENST00000498739 USP34Q70CQ2 3546 aa16.93■□□□□ 0.3
PRKCB-210ENST00000498739 CEP192Q8TEP8 1941 aa16.92■□□□□ 0.3
PRKCB-210ENST00000498739 A0A1B0GTW7 788 aa16.92■□□□□ 0.3
PRKCB-210ENST00000498739 A0A1W2PPC4 97 aa16.92■□□□□ 0.3
PRKCB-210ENST00000498739 A0A1W2PQU0 124 aa16.92■□□□□ 0.3
PRKCB-210ENST00000498739 TSPAN11A1L157 253 aa16.92■□□□□ 0.3
PRKCB-210ENST00000498739 KHNYNO15037 678 aaKnown RBP16.92■□□□□ 0.3
PRKCB-210ENST00000498739 AP1G1O43747 822 aa16.92■□□□□ 0.3
PRKCB-210ENST00000498739 TIMP2P16035 220 aa16.92■□□□□ 0.3
PRKCB-210ENST00000498739 OTUD4Q01804 1114 aaKnown RBP16.92■□□□□ 0.3
PRKCB-210ENST00000498739 DSC2Q02487 901 aa16.92■□□□□ 0.3
PRKCB-210ENST00000498739 PRKD1Q15139 912 aaPredicted RBP16.92■□□□□ 0.3
PRKCB-210ENST00000498739 NOMO1Q15155 1222 aa16.92■□□□□ 0.3
PRKCB-210ENST00000498739 RPS6KA1Q15418 735 aa16.92■□□□□ 0.3
PRKCB-210ENST00000498739 FAM182AQ5T1J6 154 aa16.92■□□□□ 0.3
PRKCB-210ENST00000498739 SEL1L2Q5TEA6 688 aa16.92■□□□□ 0.3
PRKCB-210ENST00000498739 NEK5Q6P3R8 708 aa16.92■□□□□ 0.3
PRKCB-210ENST00000498739 BRAT1Q6PJG6 821 aa16.92■□□□□ 0.3
PRKCB-210ENST00000498739 PRPF39Q86UA1 669 aaKnown RBP16.92■□□□□ 0.3
PRKCB-210ENST00000498739 HORMAD1Q86X24 394 aa16.92■□□□□ 0.3
PRKCB-210ENST00000498739 ZSWIM9Q86XI8 627 aa16.92■□□□□ 0.3
PRKCB-210ENST00000498739 CEP76Q8TAP6 659 aa16.92■□□□□ 0.3
PRKCB-210ENST00000498739 ACTL9Q8TC94 416 aa16.92■□□□□ 0.3
PRKCB-210ENST00000498739 PDCD6IPQ8WUM4 868 aaKnown RBP16.92■□□□□ 0.3
PRKCB-210ENST00000498739 IL12RB2Q99665 862 aa16.92■□□□□ 0.3
PRKCB-210ENST00000498739 NUSAP1Q9BXS6 441 aaKnown RBP16.92■□□□□ 0.3
PRKCB-210ENST00000498739 EBF2Q9HAK2 575 aa16.92■□□□□ 0.3
PRKCB-210ENST00000498739 GGT7Q9UJ14 662 aa16.92■□□□□ 0.3
PRKCB-210ENST00000498739 TPX2Q9ULW0 747 aaKnown RBP16.92■□□□□ 0.3
PRKCB-210ENST00000498739 PCDHGC4Q9Y5F7 938 aa16.92■□□□□ 0.3
PRKCB-210ENST00000498739 SLCO1B1Q9Y6L6 691 aa16.92■□□□□ 0.3
PRKCB-210ENST00000498739 SHROOM3Q8TF72 1996 aa16.91■□□□□ 0.3
PRKCB-210ENST00000498739 SPAG17Q6Q759 2223 aa16.91■□□□□ 0.3
PRKCB-210ENST00000498739 GOLGA6L9A6NEM1 432 aa16.91■□□□□ 0.3
PRKCB-210ENST00000498739 UPK3BL1B0FP48 263 aa16.91■□□□□ 0.3
PRKCB-210ENST00000498739 C10orf142B7Z368 130 aa16.91■□□□□ 0.3
PRKCB-210ENST00000498739 UPK3BL2E5RIL1 263 aa16.91■□□□□ 0.3
PRKCB-210ENST00000498739 H7C0C1 242 aa16.91■□□□□ 0.3
PRKCB-210ENST00000498739 TRAFD1O14545 582 aaPredicted RBP16.91■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms