RNA–Protein interactions for RNA: ENST00000498731.5

SOX2-OT-218, SOX2 overlapping transcript, humanhuman

TSL 1 (best) BASIC

Gene SOX2-OT, Length 3,576 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-218ENST00000498731 PRDM8Q9NQV8 689 aa5.85□□□□□ -1.47
SOX2-OT-218ENST00000498731 CDKN2AIPQ9NXV6 580 aaPredicted RBP5.85□□□□□ -1.47
SOX2-OT-218ENST00000498731 CDH7Q9ULB5 785 aa5.85□□□□□ -1.47
SOX2-OT-218ENST00000498731 AGTPBP1Q9UPW5 1226 aa5.85□□□□□ -1.47
SOX2-OT-218ENST00000498731 ACTL7BQ9Y614 415 aa5.85□□□□□ -1.47
SOX2-OT-218ENST00000498731 NCANO14594 1321 aa5.85□□□□□ -1.47
SOX2-OT-218ENST00000498731 TCRBV7S3A2A0A539 114 aa5.85□□□□□ -1.47
SOX2-OT-218ENST00000498731 AMHP03971 560 aa5.85□□□□□ -1.47
SOX2-OT-218ENST00000498731 GSTM1P09488 218 aa5.85□□□□□ -1.47
SOX2-OT-218ENST00000498731 FBXO45P0C2W1 286 aa5.85□□□□□ -1.47
SOX2-OT-218ENST00000498731 PSMC3P17980 439 aa5.85□□□□□ -1.47
SOX2-OT-218ENST00000498731 SOX5P35711 763 aa5.85□□□□□ -1.47
SOX2-OT-218ENST00000498731 ADCYAP1R1P41586 468 aa5.85□□□□□ -1.47
SOX2-OT-218ENST00000498731 SLC26A2P50443 739 aa5.85□□□□□ -1.47
SOX2-OT-218ENST00000498731 CCNA1P78396 465 aa5.85□□□□□ -1.47
SOX2-OT-218ENST00000498731 NFKB2Q00653 900 aa5.85□□□□□ -1.47
SOX2-OT-218ENST00000498731 CDK18Q07002 472 aa5.85□□□□□ -1.47
SOX2-OT-218ENST00000498731 TRPC3Q13507 836 aa5.85□□□□□ -1.47
SOX2-OT-218ENST00000498731 ZBTB41Q5SVQ8 909 aa5.85□□□□□ -1.47
SOX2-OT-218ENST00000498731 ARMC4Q5T2S8 1044 aa5.85□□□□□ -1.47
SOX2-OT-218ENST00000498731 AGAP7PQ5VUJ5 663 aa5.85□□□□□ -1.47
SOX2-OT-218ENST00000498731 NEK5Q6P3R8 708 aa5.85□□□□□ -1.47
SOX2-OT-218ENST00000498731 CATSPER4Q7RTX7 472 aa5.85□□□□□ -1.47
SOX2-OT-218ENST00000498731 CARM1Q86X55 608 aa5.85□□□□□ -1.47
SOX2-OT-218ENST00000498731 IGDCC3Q8IVU1 814 aa5.85□□□□□ -1.47
SOX2-OT-218ENST00000498731 ADGRG5Q8IZF4 528 aa5.85□□□□□ -1.47
SOX2-OT-218ENST00000498731 SYCE1Q8N0S2 351 aa5.85□□□□□ -1.47
SOX2-OT-218ENST00000498731 REPS2Q8NFH8 660 aa5.85□□□□□ -1.47
SOX2-OT-218ENST00000498731 GPRC5AQ8NFJ5 357 aa5.85□□□□□ -1.47
SOX2-OT-218ENST00000498731 RSAD2Q8WXG1 361 aa5.85□□□□□ -1.47
SOX2-OT-218ENST00000498731 ATP6V1E2Q96A05 226 aa5.85□□□□□ -1.47
SOX2-OT-218ENST00000498731 TBATAQ96M53 351 aa5.85□□□□□ -1.47
SOX2-OT-218ENST00000498731 DHRS9Q9BPW9 319 aa5.85□□□□□ -1.47
SOX2-OT-218ENST00000498731 FERMT1Q9BQL6 677 aa5.85□□□□□ -1.47
SOX2-OT-218ENST00000498731 IMPG2Q9BZV3 1241 aa5.85□□□□□ -1.47
SOX2-OT-218ENST00000498731 CLPBQ9H078 707 aa5.85□□□□□ -1.47
SOX2-OT-218ENST00000498731 MAGEE1Q9HCI5 957 aa5.85□□□□□ -1.47
SOX2-OT-218ENST00000498731 C1orf112Q9NSG2 853 aa5.85□□□□□ -1.47
SOX2-OT-218ENST00000498731 GMIPQ9P107 970 aa5.85□□□□□ -1.47
SOX2-OT-218ENST00000498731 WHRNQ9P202 907 aa5.85□□□□□ -1.47
SOX2-OT-218ENST00000498731 APEX2Q9UBZ4 518 aa5.85□□□□□ -1.47
SOX2-OT-218ENST00000498731 PFDN2Q9UHV9 154 aa5.85□□□□□ -1.47
SOX2-OT-218ENST00000498731 GNPTGQ9UJJ9 305 aa5.85□□□□□ -1.47
SOX2-OT-218ENST00000498731 RAB26Q9ULW5 256 aa5.85□□□□□ -1.47
SOX2-OT-218ENST00000498731 GPR52Q9Y2T5 361 aa5.85□□□□□ -1.47
SOX2-OT-218ENST00000498731 SIPA1L1O43166 1804 aa5.85□□□□□ -1.47
SOX2-OT-218ENST00000498731 MYO9BQ13459 2157 aa5.84□□□□□ -1.47
SOX2-OT-218ENST00000498731 ILVBLA1L0T0 632 aa5.84□□□□□ -1.47
SOX2-OT-218ENST00000498731 GOLGA8CPA6NN73 597 aa5.84□□□□□ -1.47
SOX2-OT-218ENST00000498731 SPATA31C2B4DYI2 1134 aa5.84□□□□□ -1.47
SOX2-OT-218ENST00000498731 ATP6V1G2-DDX39BF2Z307 99 aa5.84□□□□□ -1.47
SOX2-OT-218ENST00000498731 DLGAP1O14490 977 aa5.84□□□□□ -1.47
SOX2-OT-218ENST00000498731 RGS13O14921 159 aa5.84□□□□□ -1.47
SOX2-OT-218ENST00000498731 ZBTB14O43829 449 aa5.84□□□□□ -1.47
SOX2-OT-218ENST00000498731 GAS2O43903 313 aaKnown RBP5.84□□□□□ -1.47
SOX2-OT-218ENST00000498731 MAN1A2O60476 641 aa5.84□□□□□ -1.47
SOX2-OT-218ENST00000498731 XYLBO75191 536 aa5.84□□□□□ -1.47
SOX2-OT-218ENST00000498731 STAM2O75886 525 aa5.84□□□□□ -1.47
SOX2-OT-218ENST00000498731 TSPAN9O75954 239 aa5.84□□□□□ -1.47
SOX2-OT-218ENST00000498731 ALX3O95076 343 aa5.84□□□□□ -1.47
SOX2-OT-218ENST00000498731 F7P08709 466 aaPredicted RBP5.84□□□□□ -1.47
SOX2-OT-218ENST00000498731 CLEC2LP0C7M8 214 aa5.84□□□□□ -1.47
SOX2-OT-218ENST00000498731 ADORA2AP29274 412 aa5.84□□□□□ -1.47
SOX2-OT-218ENST00000498731 ALDH4A1P30038 563 aa5.84□□□□□ -1.47
SOX2-OT-218ENST00000498731 KRT20P35900 424 aa5.84□□□□□ -1.47
SOX2-OT-218ENST00000498731 SLC1A1P43005 524 aa5.84□□□□□ -1.47
SOX2-OT-218ENST00000498731 HNRNPFP52597 415 aaKnown RBP5.84□□□□□ -1.47
SOX2-OT-218ENST00000498731 NLRP11P59045 1033 aaKnown RBP5.84□□□□□ -1.47
SOX2-OT-218ENST00000498731 PIGFQ07326 219 aa5.84□□□□□ -1.47
SOX2-OT-218ENST00000498731 ZBTB17Q13105 803 aa5.84□□□□□ -1.47
SOX2-OT-218ENST00000498731 TTLL4Q14679 1199 aa5.84□□□□□ -1.47
SOX2-OT-218ENST00000498731 MOGQ16653 247 aa5.84□□□□□ -1.47
SOX2-OT-218ENST00000498731 MTX3Q5HYI7 312 aa5.84□□□□□ -1.47
SOX2-OT-218ENST00000498731 FAM26DQ5JW98 314 aa5.84□□□□□ -1.47
SOX2-OT-218ENST00000498731 FNBP1LQ5T0N5 605 aa5.84□□□□□ -1.47
SOX2-OT-218ENST00000498731 C6orf163Q5TEZ5 329 aa5.84□□□□□ -1.47
SOX2-OT-218ENST00000498731 ANKRD22Q5VYY1 191 aa5.84□□□□□ -1.47
SOX2-OT-218ENST00000498731 NIPA1Q7RTP0 329 aa5.84□□□□□ -1.47
SOX2-OT-218ENST00000498731 ZBTB8OSQ8IWT0 167 aa5.84□□□□□ -1.47
SOX2-OT-218ENST00000498731 TMEM161BQ8NDZ6 487 aa5.84□□□□□ -1.47
SOX2-OT-218ENST00000498731 BPIFB6Q8NFQ5 453 aa5.84□□□□□ -1.47
SOX2-OT-218ENST00000498731 AFG1LQ8WV93 481 aa5.84□□□□□ -1.47
SOX2-OT-218ENST00000498731 LRTOMTQ8WZ04 291 aa5.84□□□□□ -1.47
SOX2-OT-218ENST00000498731 RPL10LQ96L21 214 aaKnown RBP5.84□□□□□ -1.47
SOX2-OT-218ENST00000498731 GCOM2Q9BZD3 368 aaPredicted RBP5.84□□□□□ -1.47
SOX2-OT-218ENST00000498731 EDEM3Q9BZQ6 932 aa5.84□□□□□ -1.47
SOX2-OT-218ENST00000498731 TMEM117Q9H0C3 514 aa5.84□□□□□ -1.47
SOX2-OT-218ENST00000498731 C2orf40Q9H1Z8 148 aa5.84□□□□□ -1.47
SOX2-OT-218ENST00000498731 LTB4R2Q9NPC1 389 aa5.84□□□□□ -1.47
SOX2-OT-218ENST00000498731 DUS2Q9NX74 493 aaKnown RBP5.84□□□□□ -1.47
SOX2-OT-218ENST00000498731 GDAP2Q9NXN4 497 aa5.84□□□□□ -1.47
SOX2-OT-218ENST00000498731 RBAKQ9NYW8 714 aaPredicted RBP5.84□□□□□ -1.47
SOX2-OT-218ENST00000498731 PCDHB4Q9Y5E5 795 aa5.84□□□□□ -1.47
SOX2-OT-218ENST00000498731 IKBKGQ9Y6K9 419 aa5.84□□□□□ -1.47
SOX2-OT-218ENST00000498731 PRUNE2Q8WUY3 3088 aa5.84□□□□□ -1.47
SOX2-OT-218ENST00000498731 A0A0A6YYK5 440 aaPredicted RBP5.84□□□□□ -1.47
SOX2-OT-218ENST00000498731 SDR42E2A6NKP2 422 aa5.84□□□□□ -1.47
SOX2-OT-218ENST00000498731 CXCL11O14625 94 aa5.84□□□□□ -1.47
SOX2-OT-218ENST00000498731 SLC16A3O15427 465 aaKnown RBP5.84□□□□□ -1.47
SOX2-OT-218ENST00000498731 SGPL1O95470 568 aa5.84□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms