RNA–Protein interactions for RNA: ENST00000498495.1

HSPG2-213, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 2

Gene HSPG2, Length 488 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-213ENST00000498495 KRT1P04264 644 aa12.94□□□□□ -0.34
HSPG2-213ENST00000498495 WNT1P04628 370 aa12.94□□□□□ -0.34
HSPG2-213ENST00000498495 MX2P20592 715 aa12.94□□□□□ -0.34
HSPG2-213ENST00000498495 SERPINA4P29622 427 aa12.94□□□□□ -0.34
HSPG2-213ENST00000498495 GARSP41250 739 aaKnown RBP12.94□□□□□ -0.34
HSPG2-213ENST00000498495 ABL2P42684 1182 aa12.94□□□□□ -0.34
HSPG2-213ENST00000498495 CTSKP43235 329 aa12.94□□□□□ -0.34
HSPG2-213ENST00000498495 MMP13P45452 471 aa12.94□□□□□ -0.34
HSPG2-213ENST00000498495 RGRP47804 291 aa12.94□□□□□ -0.34
HSPG2-213ENST00000498495 SUOXP51687 545 aa12.94□□□□□ -0.34
HSPG2-213ENST00000498495 POLR2LP62875 67 aaKnown RBP12.94□□□□□ -0.34
HSPG2-213ENST00000498495 GALNT2Q10471 571 aa12.94□□□□□ -0.34
HSPG2-213ENST00000498495 SUZ12Q15022 739 aaKnown RBP12.94□□□□□ -0.34
HSPG2-213ENST00000498495 IFI16Q16666 785 aaKnown RBP12.94□□□□□ -0.34
HSPG2-213ENST00000498495 ZNF284Q2VY69 593 aa12.94□□□□□ -0.34
HSPG2-213ENST00000498495 PPM1JQ5JR12 505 aa12.94□□□□□ -0.34
HSPG2-213ENST00000498495 SEL1L3Q68CR1 1132 aa12.94□□□□□ -0.34
HSPG2-213ENST00000498495 TIGD7Q6NT04 549 aaPredicted RBP12.94□□□□□ -0.34
HSPG2-213ENST00000498495 KIAA1328Q86T90 577 aa12.94□□□□□ -0.34
HSPG2-213ENST00000498495 ZSCAN30Q86W11 494 aa12.94□□□□□ -0.34
HSPG2-213ENST00000498495 KLHDC7BQ96G42 594 aa12.94□□□□□ -0.34
HSPG2-213ENST00000498495 ATP13A3Q9H7F0 1226 aa12.94□□□□□ -0.34
HSPG2-213ENST00000498495 IL21RQ9HBE5 538 aa12.94□□□□□ -0.34
HSPG2-213ENST00000498495 TM7SF3Q9NS93 570 aa12.94□□□□□ -0.34
HSPG2-213ENST00000498495 SBDSQ9Y3A5 250 aaKnown RBP eCLIP12.94□□□□□ -0.34
HSPG2-213ENST00000498495 FRYLO94915 3013 aa12.94□□□□□ -0.34
HSPG2-213ENST00000498495 ZNF292O60281 2723 aa12.93□□□□□ -0.34
HSPG2-213ENST00000498495 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP12.93□□□□□ -0.34
HSPG2-213ENST00000498495 IGLON5A6NGN9 336 aa12.93□□□□□ -0.34
HSPG2-213ENST00000498495 ZNF487B1APH4 448 aa12.93□□□□□ -0.34
HSPG2-213ENST00000498495 APOL1O14791 398 aa12.93□□□□□ -0.34
HSPG2-213ENST00000498495 AREL1O15033 823 aa12.93□□□□□ -0.34
HSPG2-213ENST00000498495 MUSKO15146 869 aa12.93□□□□□ -0.34
HSPG2-213ENST00000498495 MATN3O15232 486 aa12.93□□□□□ -0.34
HSPG2-213ENST00000498495 DFNA5O60443 496 aa12.93□□□□□ -0.34
HSPG2-213ENST00000498495 GJB3O75712 270 aa12.93□□□□□ -0.34
HSPG2-213ENST00000498495 NEBLO76041 1014 aa12.93□□□□□ -0.34
HSPG2-213ENST00000498495 ZNF883P0CG24 379 aa12.93□□□□□ -0.34
HSPG2-213ENST00000498495 PRLRP16471 622 aa12.93□□□□□ -0.34
HSPG2-213ENST00000498495 ZFXP17010 805 aaPredicted RBP12.93□□□□□ -0.34
HSPG2-213ENST00000498495 ITIH2P19823 946 aa12.93□□□□□ -0.34
HSPG2-213ENST00000498495 CSRP1P21291 193 aaKnown RBP12.93□□□□□ -0.34
HSPG2-213ENST00000498495 HNRNPA2B1P22626 353 aaKnown RBP12.93□□□□□ -0.34
HSPG2-213ENST00000498495 CCNCP24863 283 aa12.93□□□□□ -0.34
HSPG2-213ENST00000498495 AKT2P31751 481 aa12.93□□□□□ -0.34
HSPG2-213ENST00000498495 NOVA1P51513 510 aaKnown RBP12.93□□□□□ -0.34
HSPG2-213ENST00000498495 VAV2P52735 878 aa12.93□□□□□ -0.34
HSPG2-213ENST00000498495 AP1S1P61966 158 aa12.93□□□□□ -0.34
HSPG2-213ENST00000498495 ITKQ08881 620 aa12.93□□□□□ -0.34
HSPG2-213ENST00000498495 ELP6Q0PNE2 266 aa12.93□□□□□ -0.34
HSPG2-213ENST00000498495 OVGP1Q12889 678 aa12.93□□□□□ -0.34
HSPG2-213ENST00000498495 HNRNPDQ14103 355 aaKnown RBP12.93□□□□□ -0.34
HSPG2-213ENST00000498495 UGP2Q16851 508 aa12.93□□□□□ -0.34
HSPG2-213ENST00000498495 TMEM259Q4ZIN3 620 aa12.93□□□□□ -0.34
HSPG2-213ENST00000498495 LRRC73Q5JTD7 316 aa12.93□□□□□ -0.34
HSPG2-213ENST00000498495 PRAMEF14Q5SWL7 426 aa12.93□□□□□ -0.34
HSPG2-213ENST00000498495 BRAT1Q6PJG6 821 aa12.93□□□□□ -0.34
HSPG2-213ENST00000498495 DAAM2Q86T65 1068 aa12.93□□□□□ -0.34
HSPG2-213ENST00000498495 IQCHQ86VS3 1027 aa12.93□□□□□ -0.34
HSPG2-213ENST00000498495 VSIG1Q86XK7 387 aa12.93□□□□□ -0.34
HSPG2-213ENST00000498495 RFX6Q8HWS3 928 aa12.93□□□□□ -0.34
HSPG2-213ENST00000498495 TXLNBQ8N3L3 684 aa12.93□□□□□ -0.34
HSPG2-213ENST00000498495 CCNYQ8ND76 341 aa12.93□□□□□ -0.34
HSPG2-213ENST00000498495 ACRBPQ8NEB7 543 aa12.93□□□□□ -0.34
HSPG2-213ENST00000498495 TPCN2Q8NHX9 752 aa12.93□□□□□ -0.34
HSPG2-213ENST00000498495 CXorf40AQ8TE69 158 aa12.93□□□□□ -0.34
HSPG2-213ENST00000498495 ZNF830Q96NB3 372 aaPredicted RBP12.93□□□□□ -0.34
HSPG2-213ENST00000498495 MYOCQ99972 504 aa12.93□□□□□ -0.34
HSPG2-213ENST00000498495 GOLPH3Q9H4A6 298 aa12.93□□□□□ -0.34
HSPG2-213ENST00000498495 SCUBE2Q9NQ36 999 aa12.93□□□□□ -0.34
HSPG2-213ENST00000498495 GDF3Q9NR23 364 aa12.93□□□□□ -0.34
HSPG2-213ENST00000498495 CA5BQ9Y2D0 317 aa12.93□□□□□ -0.34
HSPG2-213ENST00000498495 HEY1Q9Y5J3 304 aa12.93□□□□□ -0.34
HSPG2-213ENST00000498495 HS3ST3A1Q9Y663 406 aa12.93□□□□□ -0.34
HSPG2-213ENST00000498495 PCDH15Q96QU1 1955 aa12.92□□□□□ -0.34
HSPG2-213ENST00000498495 TTC24A2A3L6 582 aaPredicted RBP12.92□□□□□ -0.34
HSPG2-213ENST00000498495 RCCD1A6NED2 376 aa12.92□□□□□ -0.34
HSPG2-213ENST00000498495 C3orf70A6NLC5 250 aaPredicted RBP12.92□□□□□ -0.34
HSPG2-213ENST00000498495 UPK3BL1B0FP48 263 aa12.92□□□□□ -0.34
HSPG2-213ENST00000498495 UPK3BL2E5RIL1 263 aa12.92□□□□□ -0.34
HSPG2-213ENST00000498495 H0Y8X5 98 aa12.92□□□□□ -0.34
HSPG2-213ENST00000498495 PSTPIP1O43586 416 aa12.92□□□□□ -0.34
HSPG2-213ENST00000498495 MMP20O60882 483 aa12.92□□□□□ -0.34
HSPG2-213ENST00000498495 TM7SF2O76062 418 aa12.92□□□□□ -0.34
HSPG2-213ENST00000498495 ZRANB2O95218 330 aaKnown RBP eCLIP12.92□□□□□ -0.34
HSPG2-213ENST00000498495 CEACAM1P13688 526 aa12.92□□□□□ -0.34
HSPG2-213ENST00000498495 CD59P13987 128 aa12.92□□□□□ -0.34
HSPG2-213ENST00000498495 GSDMDP57764 484 aa12.92□□□□□ -0.34
HSPG2-213ENST00000498495 MAXP61244 160 aa12.92□□□□□ -0.34
HSPG2-213ENST00000498495 FOXK2Q01167 660 aa12.92□□□□□ -0.34
HSPG2-213ENST00000498495 GBE1Q04446 702 aa12.92□□□□□ -0.34
HSPG2-213ENST00000498495 SLC10A2Q12908 348 aaPredicted RBP12.92□□□□□ -0.34
HSPG2-213ENST00000498495 ZNF423Q2M1K9 1284 aa12.92□□□□□ -0.34
HSPG2-213ENST00000498495 RALGPS1Q5JS13 557 aa12.92□□□□□ -0.34
HSPG2-213ENST00000498495 PSAPL1Q6NUJ1 521 aa12.92□□□□□ -0.34
HSPG2-213ENST00000498495 C11orf63Q6NUN7 778 aa12.92□□□□□ -0.34
HSPG2-213ENST00000498495 ERAP2Q6P179 960 aa12.92□□□□□ -0.34
HSPG2-213ENST00000498495 MFSD7Q6UXD7 560 aa12.92□□□□□ -0.34
HSPG2-213ENST00000498495 TMEM139Q8IV31 216 aa12.92□□□□□ -0.34
HSPG2-213ENST00000498495 RCOR2Q8IZ40 523 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms