RNA–Protein interactions for RNA: ENST00000498212.1

HMGXB4-207, Transcript of HMG-box containing 4, humanhuman

TSL 3

Gene HMGXB4, Length 778 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-207ENST00000498212 ACADVLP49748 655 aa8.58□□□□□ -1.04
HMGXB4-207ENST00000498212 PAPOLAP51003 745 aaKnown RBP8.58□□□□□ -1.04
HMGXB4-207ENST00000498212 ZNF135P52742 658 aaPredicted RBP8.58□□□□□ -1.04
HMGXB4-207ENST00000498212 ZBED6P86452 979 aa8.58□□□□□ -1.04
HMGXB4-207ENST00000498212 DNAJC3Q13217 504 aa8.58□□□□□ -1.04
HMGXB4-207ENST00000498212 GRM3Q14832 879 aa8.58□□□□□ -1.04
HMGXB4-207ENST00000498212 CYTH1Q15438 398 aa8.58□□□□□ -1.04
HMGXB4-207ENST00000498212 SMAD1Q15797 465 aaKnown RBP8.58□□□□□ -1.04
HMGXB4-207ENST00000498212 HS1BP3Q53T59 392 aa8.58□□□□□ -1.04
HMGXB4-207ENST00000498212 LRRC73Q5JTD7 316 aa8.58□□□□□ -1.04
HMGXB4-207ENST00000498212 HGSNATQ68CP4 663 aa8.58□□□□□ -1.04
HMGXB4-207ENST00000498212 RFX8Q6ZV50 586 aa8.58□□□□□ -1.04
HMGXB4-207ENST00000498212 CYP4V2Q6ZWL3 525 aaPredicted RBP8.58□□□□□ -1.04
HMGXB4-207ENST00000498212 SLC22A18ASQ8N1D0 253 aa8.58□□□□□ -1.04
HMGXB4-207ENST00000498212 DENND6BQ8NEG7 585 aa8.58□□□□□ -1.04
HMGXB4-207ENST00000498212 CXorf40AQ8TE69 158 aa8.58□□□□□ -1.04
HMGXB4-207ENST00000498212 CPLX3Q8WVH0 158 aa8.58□□□□□ -1.04
HMGXB4-207ENST00000498212 ASB12Q8WXK4 309 aa8.58□□□□□ -1.04
HMGXB4-207ENST00000498212 TSC1Q92574 1164 aa8.58□□□□□ -1.04
HMGXB4-207ENST00000498212 IFT43Q96FT9 208 aa8.58□□□□□ -1.04
HMGXB4-207ENST00000498212 BMFQ96LC9 184 aa8.58□□□□□ -1.04
HMGXB4-207ENST00000498212 THAP2Q9H0W7 228 aa8.58□□□□□ -1.04
HMGXB4-207ENST00000498212 ZWILCHQ9H900 591 aa8.58□□□□□ -1.04
HMGXB4-207ENST00000498212 SP110Q9HB58 689 aa8.58□□□□□ -1.04
HMGXB4-207ENST00000498212 GPR27Q9NS67 375 aa8.58□□□□□ -1.04
HMGXB4-207ENST00000498212 KLHL11Q9NVR0 708 aa8.58□□□□□ -1.04
HMGXB4-207ENST00000498212 IFNKQ9P0W0 207 aa8.58□□□□□ -1.04
HMGXB4-207ENST00000498212 DKK3Q9UBP4 350 aa8.58□□□□□ -1.04
HMGXB4-207ENST00000498212 CAPN11Q9UMQ6 739 aa8.58□□□□□ -1.04
HMGXB4-207ENST00000498212 ADAMTS20P59510 1910 aa8.58□□□□□ -1.04
HMGXB4-207ENST00000498212 FRYQ5TBA9 3013 aa8.58□□□□□ -1.04
HMGXB4-207ENST00000498212 CACNA1BQ00975 2339 aa8.57□□□□□ -1.04
HMGXB4-207ENST00000498212 SPTY2D1-AS1A0A0U1RR47 76 aa8.57□□□□□ -1.04
HMGXB4-207ENST00000498212 FAM149AA5PLN7 773 aa8.57□□□□□ -1.04
HMGXB4-207ENST00000498212 SRRM3A6NNA2 597 aaPredicted RBP8.57□□□□□ -1.04
HMGXB4-207ENST00000498212 DFFAO00273 331 aa8.57□□□□□ -1.04
HMGXB4-207ENST00000498212 INSIG1O15503 277 aa8.57□□□□□ -1.04
HMGXB4-207ENST00000498212 FFAR2O15552 330 aa8.57□□□□□ -1.04
HMGXB4-207ENST00000498212 SPINT1O43278 529 aa8.57□□□□□ -1.04
HMGXB4-207ENST00000498212 MMP20O60882 483 aa8.57□□□□□ -1.04
HMGXB4-207ENST00000498212 PALMO75781 387 aa8.57□□□□□ -1.04
HMGXB4-207ENST00000498212 TM7SF2O76062 418 aa8.57□□□□□ -1.04
HMGXB4-207ENST00000498212 PIGNO95427 931 aa8.57□□□□□ -1.04
HMGXB4-207ENST00000498212 CAPNS1P04632 268 aa8.57□□□□□ -1.04
HMGXB4-207ENST00000498212 GYPCP04921 128 aa8.57□□□□□ -1.04
HMGXB4-207ENST00000498212 XPAP23025 273 aaPredicted RBP8.57□□□□□ -1.04
HMGXB4-207ENST00000498212 HNF1BP35680 557 aa8.57□□□□□ -1.04
HMGXB4-207ENST00000498212 ARL4AP40617 200 aa8.57□□□□□ -1.04
HMGXB4-207ENST00000498212 HCAR3P49019 387 aa8.57□□□□□ -1.04
HMGXB4-207ENST00000498212 SUOXP51687 545 aa8.57□□□□□ -1.04
HMGXB4-207ENST00000498212 ELP6Q0PNE2 266 aa8.57□□□□□ -1.04
HMGXB4-207ENST00000498212 ZNF211Q13398 564 aaPredicted RBP8.57□□□□□ -1.04
HMGXB4-207ENST00000498212 DPYSQ14117 519 aa8.57□□□□□ -1.04
HMGXB4-207ENST00000498212 PDE1CQ14123 709 aaPredicted RBP8.57□□□□□ -1.04
HMGXB4-207ENST00000498212 PIGHQ14442 188 aaPredicted RBP8.57□□□□□ -1.04
HMGXB4-207ENST00000498212 NFKBIBQ15653 356 aa8.57□□□□□ -1.04
HMGXB4-207ENST00000498212 SMTNL2Q2TAL5 461 aa8.57□□□□□ -1.04
HMGXB4-207ENST00000498212 ZSCAN23Q3MJ62 389 aa8.57□□□□□ -1.04
HMGXB4-207ENST00000498212 CFAP58Q5T655 872 aa8.57□□□□□ -1.04
HMGXB4-207ENST00000498212 AFMIDQ63HM1 303 aa8.57□□□□□ -1.04
HMGXB4-207ENST00000498212 PARGQ86W56 976 aa8.57□□□□□ -1.04
HMGXB4-207ENST00000498212 TMPRSS12Q86WS5 348 aa8.57□□□□□ -1.04
HMGXB4-207ENST00000498212 PROSER1Q86XN7 944 aa8.57□□□□□ -1.04
HMGXB4-207ENST00000498212 ARHGAP12Q8IWW6 846 aa8.57□□□□□ -1.04
HMGXB4-207ENST00000498212 SLC25A45Q8N413 288 aa8.57□□□□□ -1.04
HMGXB4-207ENST00000498212 NPWQ8N729 165 aa8.57□□□□□ -1.04
HMGXB4-207ENST00000498212 OR4C6Q8NH72 309 aa8.57□□□□□ -1.04
HMGXB4-207ENST00000498212 HCAR2Q8TDS4 363 aa8.57□□□□□ -1.04
HMGXB4-207ENST00000498212 SPOCK2Q92563 424 aa8.57□□□□□ -1.04
HMGXB4-207ENST00000498212 TUBGCP5Q96RT8 1024 aa8.57□□□□□ -1.04
HMGXB4-207ENST00000498212 KLF6Q99612 283 aaPredicted RBP8.57□□□□□ -1.04
HMGXB4-207ENST00000498212 CINPQ9BW66 212 aaPredicted RBP8.57□□□□□ -1.04
HMGXB4-207ENST00000498212 C1QTNF7Q9BXJ2 289 aa8.57□□□□□ -1.04
HMGXB4-207ENST00000498212 SUV39H2Q9H5I1 410 aa8.57□□□□□ -1.04
HMGXB4-207ENST00000498212 CCDC86Q9H6F5 360 aaKnown RBP8.57□□□□□ -1.04
HMGXB4-207ENST00000498212 UCKL1Q9NWZ5 548 aa8.57□□□□□ -1.04
HMGXB4-207ENST00000498212 DNAJC28Q9NX36 388 aa8.57□□□□□ -1.04
HMGXB4-207ENST00000498212 CWC15Q9P013 229 aaKnown RBP8.57□□□□□ -1.04
HMGXB4-207ENST00000498212 IPO11Q9UI26 975 aaKnown RBP8.57□□□□□ -1.04
HMGXB4-207ENST00000498212 LUC7L2Q9Y383 392 aaKnown RBP8.57□□□□□ -1.04
HMGXB4-207ENST00000498212 AKAP13Q12802 2813 aa8.57□□□□□ -1.04
HMGXB4-207ENST00000498212 GOLGA4Q13439 2230 aaKnown RBP8.56□□□□□ -1.04
HMGXB4-207ENST00000498212 CHD8Q9HCK8 2581 aa8.56□□□□□ -1.04
HMGXB4-207ENST00000498212 A0A087X0T9 212 aa8.56□□□□□ -1.04
HMGXB4-207ENST00000498212 TSPAN11A1L157 253 aa8.56□□□□□ -1.04
HMGXB4-207ENST00000498212 NEMP2A6NFY4 417 aa8.56□□□□□ -1.04
HMGXB4-207ENST00000498212 H3BM21 787 aa8.56□□□□□ -1.04
HMGXB4-207ENST00000498212 H3BRJ5 948 aa8.56□□□□□ -1.04
HMGXB4-207ENST00000498212 TRIM38O00635 465 aa8.56□□□□□ -1.04
HMGXB4-207ENST00000498212 TOR1BO14657 336 aa8.56□□□□□ -1.04
HMGXB4-207ENST00000498212 SIGLEC6O43699 453 aa8.56□□□□□ -1.04
HMGXB4-207ENST00000498212 CSF2P04141 144 aa8.56□□□□□ -1.04
HMGXB4-207ENST00000498212 TPM3P06753 285 aa8.56□□□□□ -1.04
HMGXB4-207ENST00000498212 FAM228BP0C875 321 aa8.56□□□□□ -1.04
HMGXB4-207ENST00000498212 ALPPL2P10696 532 aa8.56□□□□□ -1.04
HMGXB4-207ENST00000498212 TCF4P15884 667 aa8.56□□□□□ -1.04
HMGXB4-207ENST00000498212 TIMP2P16035 220 aa8.56□□□□□ -1.04
HMGXB4-207ENST00000498212 ITIH2P19823 946 aa8.56□□□□□ -1.04
HMGXB4-207ENST00000498212 ACP1P24666 158 aa8.56□□□□□ -1.04
HMGXB4-207ENST00000498212 IL1R2P27930 398 aa8.56□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms