RNA–Protein interactions for RNA: ENST00000498043.6

CHRNA4-206, Transcript of cholinergic receptor nicotinic alpha 4 subunit, humanhuman

TSL 5

Gene CHRNA4, Length 2,052 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA4-206ENST00000498043 DUSP6Q16828 381 aa17.97■□□□□ 0.47
CHRNA4-206ENST00000498043 TMEM25Q86YD3 366 aa17.97■□□□□ 0.47
CHRNA4-206ENST00000498043 VN1R2Q8NFZ6 395 aa17.97■□□□□ 0.47
CHRNA4-206ENST00000498043 ABHD8Q96I13 439 aa17.97■□□□□ 0.47
CHRNA4-206ENST00000498043 ZNF317Q96PQ6 595 aaPredicted RBP17.97■□□□□ 0.47
CHRNA4-206ENST00000498043 RBBP8Q99708 897 aa17.97■□□□□ 0.47
CHRNA4-206ENST00000498043 LHX3Q9UBR4 397 aa17.97■□□□□ 0.47
CHRNA4-206ENST00000498043 GRID1Q9ULK0 1009 aa17.97■□□□□ 0.47
CHRNA4-206ENST00000498043 CHKBQ9Y259 395 aa17.97■□□□□ 0.47
CHRNA4-206ENST00000498043 C5orf42Q9H799 3197 aa17.96■□□□□ 0.47
CHRNA4-206ENST00000498043 NEDD8-MDP1E9PL57 170 aa17.96■□□□□ 0.47
CHRNA4-206ENST00000498043 ZNF197O14709 1029 aa17.96■□□□□ 0.47
CHRNA4-206ENST00000498043 FAM107AO95990 144 aa17.96■□□□□ 0.47
CHRNA4-206ENST00000498043 ALDOAP04075 364 aaKnown RBP17.96■□□□□ 0.47
CHRNA4-206ENST00000498043 FGF1P05230 155 aa17.96■□□□□ 0.47
CHRNA4-206ENST00000498043 PIRTP0C851 137 aa17.96■□□□□ 0.47
CHRNA4-206ENST00000498043 RHOAP61586 193 aa17.96■□□□□ 0.47
CHRNA4-206ENST00000498043 USP4Q13107 963 aa17.96■□□□□ 0.47
CHRNA4-206ENST00000498043 MSLNQ13421 630 aaPredicted RBP17.96■□□□□ 0.47
CHRNA4-206ENST00000498043 LVRNQ6Q4G3 990 aa17.96■□□□□ 0.47
CHRNA4-206ENST00000498043 ARID3BQ8IVW6 561 aaPredicted RBP17.96■□□□□ 0.47
CHRNA4-206ENST00000498043 BLOC1S5Q8TDH9 187 aa17.96■□□□□ 0.47
CHRNA4-206ENST00000498043 ZNF473Q8WTR7 871 aaKnown RBP17.96■□□□□ 0.47
CHRNA4-206ENST00000498043 CKAP2Q8WWK9 683 aa17.96■□□□□ 0.47
CHRNA4-206ENST00000498043 NUDCD1Q96RS6 583 aa17.96■□□□□ 0.47
CHRNA4-206ENST00000498043 TRIB3Q96RU7 358 aa17.96■□□□□ 0.47
CHRNA4-206ENST00000498043 RANBP9Q96S59 729 aa17.96■□□□□ 0.47
CHRNA4-206ENST00000498043 KIAA1522Q9P206 1035 aaPredicted RBP17.96■□□□□ 0.47
CHRNA4-206ENST00000498043 MSRAQ9UJ68 235 aa17.96■□□□□ 0.47
CHRNA4-206ENST00000498043 MYOFQ9NZM1 2061 aa17.96■□□□□ 0.47
CHRNA4-206ENST00000498043 NUP210Q8TEM1 1887 aaPredicted RBP17.96■□□□□ 0.47
CHRNA4-206ENST00000498043 COPEO14579 308 aa17.95■□□□□ 0.46
CHRNA4-206ENST00000498043 TPP1O14773 563 aa17.95■□□□□ 0.46
CHRNA4-206ENST00000498043 POU2F2P09086 479 aa17.95■□□□□ 0.46
CHRNA4-206ENST00000498043 PAMP19021 973 aa17.95■□□□□ 0.46
CHRNA4-206ENST00000498043 CCNFP41002 786 aa17.95■□□□□ 0.46
CHRNA4-206ENST00000498043 NEK3P51956 506 aa17.95■□□□□ 0.46
CHRNA4-206ENST00000498043 IL9RQ01113 521 aa17.95■□□□□ 0.46
CHRNA4-206ENST00000498043 DMTNQ08495 405 aa17.95■□□□□ 0.46
CHRNA4-206ENST00000498043 SEPT7Q16181 437 aaKnown RBP17.95■□□□□ 0.46
CHRNA4-206ENST00000498043 ZSCAN26Q16670 478 aa17.95■□□□□ 0.46
CHRNA4-206ENST00000498043 INO80DQ53TQ3 878 aaPredicted RBP17.95■□□□□ 0.46
CHRNA4-206ENST00000498043 ATXN7L2Q5T6C5 722 aaPredicted RBP17.95■□□□□ 0.46
CHRNA4-206ENST00000498043 HHATQ5VTY9 493 aa17.95■□□□□ 0.46
CHRNA4-206ENST00000498043 FIBINQ8TAL6 211 aa17.95■□□□□ 0.46
CHRNA4-206ENST00000498043 TDRD1Q9BXT4 1180 aaKnown RBP17.95■□□□□ 0.46
CHRNA4-206ENST00000498043 SLC13A1Q9BZW2 595 aa17.95■□□□□ 0.46
CHRNA4-206ENST00000498043 TM6SF2Q9BZW4 377 aa17.95■□□□□ 0.46
CHRNA4-206ENST00000498043 ABCB8Q9NUT2 735 aa17.95■□□□□ 0.46
CHRNA4-206ENST00000498043 WNT6Q9Y6F9 365 aa17.95■□□□□ 0.46
CHRNA4-206ENST00000498043 TCP11X1B4DZS4 312 aa17.95■□□□□ 0.46
CHRNA4-206ENST00000498043 TM9SF1O15321 606 aa17.95■□□□□ 0.46
CHRNA4-206ENST00000498043 NDST3O95803 873 aa17.95■□□□□ 0.46
CHRNA4-206ENST00000498043 VIMP08670 466 aaKnown RBP17.95■□□□□ 0.46
CHRNA4-206ENST00000498043 ARCN1P48444 511 aaKnown RBP17.95■□□□□ 0.46
CHRNA4-206ENST00000498043 QPCTQ16769 361 aa17.95■□□□□ 0.46
CHRNA4-206ENST00000498043 PLEKHG6Q3KR16 790 aa17.95■□□□□ 0.46
CHRNA4-206ENST00000498043 TSTD2Q5T7W7 516 aa17.95■□□□□ 0.46
CHRNA4-206ENST00000498043 GRTP1Q5TC63 336 aa17.95■□□□□ 0.46
CHRNA4-206ENST00000498043 RNF43Q68DV7 783 aa17.95■□□□□ 0.46
CHRNA4-206ENST00000498043 KIAA0930Q6ICG6 404 aaPredicted RBP17.95■□□□□ 0.46
CHRNA4-206ENST00000498043 RETSATQ6NUM9 610 aa17.95■□□□□ 0.46
CHRNA4-206ENST00000498043 FOXR1Q6PIV2 292 aa17.95■□□□□ 0.46
CHRNA4-206ENST00000498043 CDHR3Q6ZTQ4 885 aa17.95■□□□□ 0.46
CHRNA4-206ENST00000498043 LRRC34Q8IZ02 419 aa17.95■□□□□ 0.46
CHRNA4-206ENST00000498043 SRPK1Q96SB4 655 aaKnown RBP17.95■□□□□ 0.46
CHRNA4-206ENST00000498043 BBS2Q9BXC9 721 aa17.95■□□□□ 0.46
CHRNA4-206ENST00000498043 IQCGQ9H095 443 aaKnown RBP17.95■□□□□ 0.46
CHRNA4-206ENST00000498043 LINC00597Q9H2U6 94 aa17.95■□□□□ 0.46
CHRNA4-206ENST00000498043 GGT7Q9UJ14 662 aa17.95■□□□□ 0.46
CHRNA4-206ENST00000498043 INTS6Q9UL03 887 aaKnown RBP17.95■□□□□ 0.46
CHRNA4-206ENST00000498043 PCDHGC4Q9Y5F7 938 aa17.95■□□□□ 0.46
CHRNA4-206ENST00000498043 HSFX4A0A1B0GTS1 333 aaPredicted RBP17.94■□□□□ 0.46
CHRNA4-206ENST00000498043 HSFX3A0A1B0GWH4 333 aaPredicted RBP17.94■□□□□ 0.46
CHRNA4-206ENST00000498043 CCL22O00626 93 aa17.94■□□□□ 0.46
CHRNA4-206ENST00000498043 TOP3BO95985 862 aaKnown RBP17.94■□□□□ 0.46
CHRNA4-206ENST00000498043 EPOP01588 193 aa17.94■□□□□ 0.46
CHRNA4-206ENST00000498043 HLA-FP30511 346 aa17.94■□□□□ 0.46
CHRNA4-206ENST00000498043 CCT5P48643 541 aa17.94■□□□□ 0.46
CHRNA4-206ENST00000498043 LIMK2P53671 638 aa17.94■□□□□ 0.46
CHRNA4-206ENST00000498043 PDE1BQ01064 536 aa17.94■□□□□ 0.46
CHRNA4-206ENST00000498043 ZKSCAN8Q15776 578 aaPredicted RBP17.94■□□□□ 0.46
CHRNA4-206ENST00000498043 SLC14A2Q15849 920 aa17.94■□□□□ 0.46
CHRNA4-206ENST00000498043 DENND6AQ8IWF6 608 aa17.94■□□□□ 0.46
CHRNA4-206ENST00000498043 NDUFAF2Q8N183 169 aa17.94■□□□□ 0.46
CHRNA4-206ENST00000498043 FAM111AQ96PZ2 611 aa17.94■□□□□ 0.46
CHRNA4-206ENST00000498043 SLC28A3Q9HAS3 691 aa17.94■□□□□ 0.46
CHRNA4-206ENST00000498043 ARL5AQ9Y689 179 aa17.94■□□□□ 0.46
CHRNA4-206ENST00000498043 SOBPA7XYQ1 873 aa17.94■□□□□ 0.46
CHRNA4-206ENST00000498043 RFXAPO00287 272 aa17.94■□□□□ 0.46
CHRNA4-206ENST00000498043 SMAD6O43541 496 aaKnown RBP17.94■□□□□ 0.46
CHRNA4-206ENST00000498043 DRD4P21917 467 aa17.94■□□□□ 0.46
CHRNA4-206ENST00000498043 ZNF470Q6ECI4 717 aa17.94■□□□□ 0.46
CHRNA4-206ENST00000498043 TIFABQ6ZNK6 161 aa17.94■□□□□ 0.46
CHRNA4-206ENST00000498043 CPLX4Q7Z7G2 160 aa17.94■□□□□ 0.46
CHRNA4-206ENST00000498043 OR13J1Q8NGT2 312 aa17.94■□□□□ 0.46
CHRNA4-206ENST00000498043 OR6K2Q8NGY2 324 aa17.94■□□□□ 0.46
CHRNA4-206ENST00000498043 PDCD6IPQ8WUM4 868 aaKnown RBP17.94■□□□□ 0.46
CHRNA4-206ENST00000498043 RMDN1Q96DB5 314 aa17.94■□□□□ 0.46
CHRNA4-206ENST00000498043 MAGEB18Q96M61 343 aa17.94■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms