RNA–Protein interactions for RNA: ENST00000497638.2

VPS45-210, Transcript of vacuolar protein sorting 45 homolog, humanhuman

TSL 2

Gene VPS45, Length 1,135 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS45-210ENST00000497638 MTPAPQ9NVV4 582 aaKnown RBP eCLIP7.89□□□□□ -1.15
VPS45-210ENST00000497638 CGGBP1Q9UFW8 167 aaPredicted RBP7.89□□□□□ -1.15
VPS45-210ENST00000497638 PLA2G4CQ9UP65 541 aa7.89□□□□□ -1.15
VPS45-210ENST00000497638 SCML2Q9UQR0 700 aa7.89□□□□□ -1.15
VPS45-210ENST00000497638 TRBV23OR9-2A0A075B6M9 112 aa7.88□□□□□ -1.15
VPS45-210ENST00000497638 A0A1W2PQH9 124 aa7.88□□□□□ -1.15
VPS45-210ENST00000497638 LRRC72A6NJI9 287 aa7.88□□□□□ -1.15
VPS45-210ENST00000497638 ZNF233A6NK53 670 aa7.88□□□□□ -1.15
VPS45-210ENST00000497638 K7ESM1 405 aa7.88□□□□□ -1.15
VPS45-210ENST00000497638 TLR4O00206 839 aa7.88□□□□□ -1.15
VPS45-210ENST00000497638 USP12O75317 370 aa7.88□□□□□ -1.15
VPS45-210ENST00000497638 GCNT3O95395 438 aa7.88□□□□□ -1.15
VPS45-210ENST00000497638 AFPP02771 609 aaKnown RBP7.88□□□□□ -1.15
VPS45-210ENST00000497638 RARGP13631 454 aa7.88□□□□□ -1.15
VPS45-210ENST00000497638 GIPRP48546 466 aa7.88□□□□□ -1.15
VPS45-210ENST00000497638 CCR5P51681 352 aa7.88□□□□□ -1.15
VPS45-210ENST00000497638 NEK4P51957 841 aa7.88□□□□□ -1.15
VPS45-210ENST00000497638 GALCP54803 685 aa7.88□□□□□ -1.15
VPS45-210ENST00000497638 COG7P83436 770 aa7.88□□□□□ -1.15
VPS45-210ENST00000497638 SERINC3Q13530 473 aa7.88□□□□□ -1.15
VPS45-210ENST00000497638 ZXDCQ2QGD7 858 aaPredicted RBP7.88□□□□□ -1.15
VPS45-210ENST00000497638 HS1BP3Q53T59 392 aa7.88□□□□□ -1.15
VPS45-210ENST00000497638 TMEM215Q68D42 235 aa7.88□□□□□ -1.15
VPS45-210ENST00000497638 NCEH1Q6PIU2 408 aa7.88□□□□□ -1.15
VPS45-210ENST00000497638 PAQR9Q6ZVX9 377 aa7.88□□□□□ -1.15
VPS45-210ENST00000497638 FUKQ8N0W3 1084 aa7.88□□□□□ -1.15
VPS45-210ENST00000497638 CPXM2Q8N436 756 aa7.88□□□□□ -1.15
VPS45-210ENST00000497638 ZNF276Q8N554 614 aa7.88□□□□□ -1.15
VPS45-210ENST00000497638 ZMIZ2Q8NF64 920 aa7.88□□□□□ -1.15
VPS45-210ENST00000497638 OR2T34Q8NGX1 318 aa7.88□□□□□ -1.15
VPS45-210ENST00000497638 OR6P1Q8NGX9 317 aa7.88□□□□□ -1.15
VPS45-210ENST00000497638 CDK5RAP1Q96SZ6 601 aaKnown RBP7.88□□□□□ -1.15
VPS45-210ENST00000497638 SMOQ99835 787 aa7.88□□□□□ -1.15
VPS45-210ENST00000497638 RSPH9Q9H1X1 276 aaPredicted RBP7.88□□□□□ -1.15
VPS45-210ENST00000497638 PABPC3Q9H361 631 aaKnown RBP7.88□□□□□ -1.15
VPS45-210ENST00000497638 PCIF1Q9H4Z3 704 aa7.88□□□□□ -1.15
VPS45-210ENST00000497638 CSNK1G1Q9HCP0 422 aa7.88□□□□□ -1.15
VPS45-210ENST00000497638 PRSS16Q9NQE7 514 aa7.88□□□□□ -1.15
VPS45-210ENST00000497638 OLFML3Q9NRN5 406 aa7.88□□□□□ -1.15
VPS45-210ENST00000497638 OSER1Q9NX31 292 aa7.88□□□□□ -1.15
VPS45-210ENST00000497638 FBLN5Q9UBX5 448 aa7.88□□□□□ -1.15
VPS45-210ENST00000497638 ANKRD17O75179 2603 aaKnown RBP7.88□□□□□ -1.15
VPS45-210ENST00000497638 FAM47DPA6NHR8 397 aa7.87□□□□□ -1.15
VPS45-210ENST00000497638 C10orf142B7Z368 130 aa7.87□□□□□ -1.15
VPS45-210ENST00000497638 MDM4O15151 490 aa7.87□□□□□ -1.15
VPS45-210ENST00000497638 SUV39H1O43463 412 aa7.87□□□□□ -1.15
VPS45-210ENST00000497638 OPA1O60313 960 aa7.87□□□□□ -1.15
VPS45-210ENST00000497638 NPHS1O60500 1241 aa7.87□□□□□ -1.15
VPS45-210ENST00000497638 MAGEC1O60732 1142 aa7.87□□□□□ -1.15
VPS45-210ENST00000497638 CSO75390 466 aaKnown RBP7.87□□□□□ -1.15
VPS45-210ENST00000497638 KLKB1P03952 638 aa7.87□□□□□ -1.15
VPS45-210ENST00000497638 SFTPCP11686 197 aa7.87□□□□□ -1.15
VPS45-210ENST00000497638 KRT10P13645 584 aa7.87□□□□□ -1.15
VPS45-210ENST00000497638 RBMS1P29558 406 aaKnown RBP7.87□□□□□ -1.15
VPS45-210ENST00000497638 CORO1AP31146 461 aaKnown RBP7.87□□□□□ -1.15
VPS45-210ENST00000497638 ATICP31939 592 aa7.87□□□□□ -1.15
VPS45-210ENST00000497638 OVGP1Q12889 678 aa7.87□□□□□ -1.15
VPS45-210ENST00000497638 NAPEPLDQ6IQ20 393 aa7.87□□□□□ -1.15
VPS45-210ENST00000497638 IQCHQ86VS3 1027 aa7.87□□□□□ -1.15
VPS45-210ENST00000497638 CBWD2Q8IUF1 395 aa7.87□□□□□ -1.15
VPS45-210ENST00000497638 ARHGEF39Q8N4T4 335 aa7.87□□□□□ -1.15
VPS45-210ENST00000497638 ZNF366Q8N895 744 aa7.87□□□□□ -1.15
VPS45-210ENST00000497638 EXD3Q8N9H8 876 aa7.87□□□□□ -1.15
VPS45-210ENST00000497638 C19orf47Q8N9M1 422 aaKnown RBP7.87□□□□□ -1.15
VPS45-210ENST00000497638 GANCQ8TET4 914 aa7.87□□□□□ -1.15
VPS45-210ENST00000497638 DDI1Q8WTU0 396 aa7.87□□□□□ -1.15
VPS45-210ENST00000497638 HPS3Q969F9 1004 aa7.87□□□□□ -1.15
VPS45-210ENST00000497638 SYAP1Q96A49 352 aaPredicted RBP7.87□□□□□ -1.15
VPS45-210ENST00000497638 ZBTB8AQ96BR9 441 aa7.87□□□□□ -1.15
VPS45-210ENST00000497638 GRAMD1AQ96CP6 724 aa7.87□□□□□ -1.15
VPS45-210ENST00000497638 SERAC1Q96JX3 654 aa7.87□□□□□ -1.15
VPS45-210ENST00000497638 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP7.87□□□□□ -1.15
VPS45-210ENST00000497638 EBF2Q9HAK2 575 aa7.87□□□□□ -1.15
VPS45-210ENST00000497638 NMUR1Q9HB89 426 aa7.87□□□□□ -1.15
VPS45-210ENST00000497638 KIAA1586Q9HCI6 787 aa7.87□□□□□ -1.15
VPS45-210ENST00000497638 PNPLA8Q9NP80 782 aa7.87□□□□□ -1.15
VPS45-210ENST00000497638 FBXL12Q9NXK8 326 aa7.87□□□□□ -1.15
VPS45-210ENST00000497638 NTMQ9P121 344 aa7.87□□□□□ -1.15
VPS45-210ENST00000497638 SUN2Q9UH99 717 aa7.87□□□□□ -1.15
VPS45-210ENST00000497638 FZD4Q9ULV1 537 aa7.87□□□□□ -1.15
VPS45-210ENST00000497638 CLEC4EQ9ULY5 219 aa7.87□□□□□ -1.15
VPS45-210ENST00000497638 LIMCH1Q9UPQ0 1083 aa7.87□□□□□ -1.15
VPS45-210ENST00000497638 TRIM38O00635 465 aa7.86□□□□□ -1.15
VPS45-210ENST00000497638 RNASEH1O60930 286 aaKnown RBP7.86□□□□□ -1.15
VPS45-210ENST00000497638 FUCA1P04066 466 aa7.86□□□□□ -1.15
VPS45-210ENST00000497638 ATP5BP06576 529 aaKnown RBP7.86□□□□□ -1.15
VPS45-210ENST00000497638 GP1BAP07359 652 aa7.86□□□□□ -1.15
VPS45-210ENST00000497638 DLDP09622 509 aaKnown RBP7.86□□□□□ -1.15
VPS45-210ENST00000497638 FAM200BP0CF97 657 aa7.86□□□□□ -1.15
VPS45-210ENST00000497638 RALAP11233 206 aa7.86□□□□□ -1.15
VPS45-210ENST00000497638 TNNI1P19237 187 aa7.86□□□□□ -1.15
VPS45-210ENST00000497638 TRIM21P19474 475 aaKnown RBP7.86□□□□□ -1.15
VPS45-210ENST00000497638 HLA-FP30511 346 aa7.86□□□□□ -1.15
VPS45-210ENST00000497638 NUDT1P36639 197 aa7.86□□□□□ -1.15
VPS45-210ENST00000497638 LONP1P36776 959 aaKnown RBP7.86□□□□□ -1.15
VPS45-210ENST00000497638 CASP5P51878 434 aa7.86□□□□□ -1.15
VPS45-210ENST00000497638 INHBCP55103 352 aa7.86□□□□□ -1.15
VPS45-210ENST00000497638 MAP3K7CLP57077 242 aa7.86□□□□□ -1.15
VPS45-210ENST00000497638 TRPC3Q13507 836 aa7.86□□□□□ -1.15
VPS45-210ENST00000497638 KCNJ12Q14500 433 aa7.86□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms