RNA–Protein interactions for RNA: ENST00000497488.1

BRCA1-224, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 779 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-224ENST00000497488 KHKP50053 298 aa6.24□□□□□ -1.41
BRCA1-224ENST00000497488 ATXN3P54252 364 aaPredicted RBP6.24□□□□□ -1.41
BRCA1-224ENST00000497488 ADARP55265 1226 aaKnown RBP6.24□□□□□ -1.41
BRCA1-224ENST00000497488 MC2RQ01718 297 aa6.24□□□□□ -1.41
BRCA1-224ENST00000497488 ZBTB16Q05516 673 aa6.24□□□□□ -1.41
BRCA1-224ENST00000497488 PDK1Q15118 436 aa6.24□□□□□ -1.41
BRCA1-224ENST00000497488 RPS6KA1Q15418 735 aa6.24□□□□□ -1.41
BRCA1-224ENST00000497488 TRADDQ15628 312 aa6.24□□□□□ -1.41
BRCA1-224ENST00000497488 OASLQ15646 514 aaKnown RBP6.24□□□□□ -1.41
BRCA1-224ENST00000497488 LY6KQ17RY6 165 aa6.24□□□□□ -1.41
BRCA1-224ENST00000497488 PROSER3Q2NL68 480 aa6.24□□□□□ -1.41
BRCA1-224ENST00000497488 GXYLT1Q4G148 440 aa6.24□□□□□ -1.41
BRCA1-224ENST00000497488 CEP55Q53EZ4 464 aa6.24□□□□□ -1.41
BRCA1-224ENST00000497488 HSP90AA5PQ58FG0 334 aa6.24□□□□□ -1.41
BRCA1-224ENST00000497488 C12orf60Q5U649 245 aa6.24□□□□□ -1.41
BRCA1-224ENST00000497488 SLC9A4Q6AI14 798 aa6.24□□□□□ -1.41
BRCA1-224ENST00000497488 ETFRF1Q6IPR1 90 aa6.24□□□□□ -1.41
BRCA1-224ENST00000497488 PPP1R21Q6ZMI0 780 aa6.24□□□□□ -1.41
BRCA1-224ENST00000497488 ARHGEF18Q6ZSZ5 1173 aa6.24□□□□□ -1.41
BRCA1-224ENST00000497488 USP30Q70CQ3 517 aa6.24□□□□□ -1.41
BRCA1-224ENST00000497488 DOK3Q7L591 496 aa6.24□□□□□ -1.41
BRCA1-224ENST00000497488 TMPRSS9Q7Z410 1059 aa6.24□□□□□ -1.41
BRCA1-224ENST00000497488 B3GNT8Q7Z7M8 397 aa6.24□□□□□ -1.41
BRCA1-224ENST00000497488 REXO1L1PQ8IX06 675 aa6.24□□□□□ -1.41
BRCA1-224ENST00000497488 IZUMO1Q8IYV9 350 aa6.24□□□□□ -1.41
BRCA1-224ENST00000497488 ENDOVQ8N8Q3 282 aaKnown RBP6.24□□□□□ -1.41
BRCA1-224ENST00000497488 KDM1BQ8NB78 822 aa6.24□□□□□ -1.41
BRCA1-224ENST00000497488 GMCL1P1Q8NEA9 526 aa6.24□□□□□ -1.41
BRCA1-224ENST00000497488 ZNF483Q8TF39 744 aaPredicted RBP6.24□□□□□ -1.41
BRCA1-224ENST00000497488 TEKT4Q8WW24 435 aa6.24□□□□□ -1.41
BRCA1-224ENST00000497488 SHC3Q92529 594 aa6.24□□□□□ -1.41
BRCA1-224ENST00000497488 FAM111AQ96PZ2 611 aa6.24□□□□□ -1.41
BRCA1-224ENST00000497488 CARD11Q9BXL7 1154 aa6.24□□□□□ -1.41
BRCA1-224ENST00000497488 CACNG6Q9BXT2 260 aa6.24□□□□□ -1.41
BRCA1-224ENST00000497488 HDHD5Q9BXW7 423 aa6.24□□□□□ -1.41
BRCA1-224ENST00000497488 USP29Q9HBJ7 922 aa6.24□□□□□ -1.41
BRCA1-224ENST00000497488 HECAQ9UBI9 543 aaPredicted RBP6.24□□□□□ -1.41
BRCA1-224ENST00000497488 DKK3Q9UBP4 350 aa6.24□□□□□ -1.41
BRCA1-224ENST00000497488 SERTAD3Q9UJW9 196 aa6.24□□□□□ -1.41
BRCA1-224ENST00000497488 PLAGL1Q9UM63 463 aa6.24□□□□□ -1.41
BRCA1-224ENST00000497488 RPH3AQ9Y2J0 694 aaPredicted RBP6.24□□□□□ -1.41
BRCA1-224ENST00000497488 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP6.24□□□□□ -1.41
BRCA1-224ENST00000497488 CEP162Q5TB80 1403 aa6.24□□□□□ -1.41
BRCA1-224ENST00000497488 CLSPNQ9HAW4 1339 aa6.24□□□□□ -1.41
BRCA1-224ENST00000497488 A0A1B0GVM2 712 aa6.23□□□□□ -1.41
BRCA1-224ENST00000497488 SYCE3A1L190 88 aa6.23□□□□□ -1.41
BRCA1-224ENST00000497488 PRR19A6NJB7 356 aa6.23□□□□□ -1.41
BRCA1-224ENST00000497488 LRRC72A6NJI9 287 aa6.23□□□□□ -1.41
BRCA1-224ENST00000497488 DRGXA6NNA5 263 aa6.23□□□□□ -1.41
BRCA1-224ENST00000497488 A8MVJ9 347 aa6.23□□□□□ -1.41
BRCA1-224ENST00000497488 KDM4EB2RXH2 506 aaPredicted RBP6.23□□□□□ -1.41
BRCA1-224ENST00000497488 E7ENX8 843 aa6.23□□□□□ -1.41
BRCA1-224ENST00000497488 SLC33A1O00400 549 aaPredicted RBP6.23□□□□□ -1.41
BRCA1-224ENST00000497488 FFAR3O14843 346 aa6.23□□□□□ -1.41
BRCA1-224ENST00000497488 IFIT3O14879 490 aaKnown RBP6.23□□□□□ -1.41
BRCA1-224ENST00000497488 GPR42O15529 346 aa6.23□□□□□ -1.41
BRCA1-224ENST00000497488 RIPK2O43353 540 aa6.23□□□□□ -1.41
BRCA1-224ENST00000497488 HBP1O60381 514 aa6.23□□□□□ -1.41
BRCA1-224ENST00000497488 PEX11AO75192 247 aa6.23□□□□□ -1.41
BRCA1-224ENST00000497488 RECQL4O94761 1208 aa6.23□□□□□ -1.41
BRCA1-224ENST00000497488 SUN1O94901 812 aa6.23□□□□□ -1.41
BRCA1-224ENST00000497488 KLKB1P03952 638 aa6.23□□□□□ -1.41
BRCA1-224ENST00000497488 OPN1MWP04001 364 aa6.23□□□□□ -1.41
BRCA1-224ENST00000497488 OPN1MW2P0DN77 364 aa6.23□□□□□ -1.41
BRCA1-224ENST00000497488 OPN1MW3P0DN78 364 aa6.23□□□□□ -1.41
BRCA1-224ENST00000497488 IGFBP2P18065 325 aa6.23□□□□□ -1.41
BRCA1-224ENST00000497488 GLDCP23378 1020 aa6.23□□□□□ -1.41
BRCA1-224ENST00000497488 CXCR5P32302 372 aa6.23□□□□□ -1.41
BRCA1-224ENST00000497488 CAMLGP49069 296 aa6.23□□□□□ -1.41
BRCA1-224ENST00000497488 GNAQP50148 359 aa6.23□□□□□ -1.41
BRCA1-224ENST00000497488 IRAK1P51617 712 aa6.23□□□□□ -1.41
BRCA1-224ENST00000497488 GALCP54803 685 aa6.23□□□□□ -1.41
BRCA1-224ENST00000497488 KIAA1024LP59773 190 aa6.23□□□□□ -1.41
BRCA1-224ENST00000497488 GMFBP60983 142 aa6.23□□□□□ -1.41
BRCA1-224ENST00000497488 KCNJ10P78508 379 aa6.23□□□□□ -1.41
BRCA1-224ENST00000497488 CYP4A11Q02928 519 aa6.23□□□□□ -1.41
BRCA1-224ENST00000497488 TAP2Q03519 686 aa6.23□□□□□ -1.41
BRCA1-224ENST00000497488 SGCGQ13326 291 aa6.23□□□□□ -1.41
BRCA1-224ENST00000497488 PPIGQ13427 754 aaKnown RBP eCLIP6.23□□□□□ -1.412e-6■■■■□ 20.9
BRCA1-224ENST00000497488 TRA2AQ13595 282 aaKnown RBP eCLIP6.23□□□□□ -1.41
BRCA1-224ENST00000497488 INAQ16352 499 aa6.23□□□□□ -1.41
BRCA1-224ENST00000497488 GPR162Q16538 588 aa6.23□□□□□ -1.41
BRCA1-224ENST00000497488 PMS2CLQ68D20 193 aa6.23□□□□□ -1.41
BRCA1-224ENST00000497488 TXNDC8Q6A555 127 aa6.23□□□□□ -1.41
BRCA1-224ENST00000497488 DPY19L2P1Q6NXN4 242 aa6.23□□□□□ -1.41
BRCA1-224ENST00000497488 EFCAB12Q6NXP0 572 aa6.23□□□□□ -1.41
BRCA1-224ENST00000497488 ZCCHC12Q6PEW1 402 aa6.23□□□□□ -1.41
BRCA1-224ENST00000497488 CCBE1Q6UXH8 406 aaPredicted RBP6.23□□□□□ -1.41
BRCA1-224ENST00000497488 SPRED2Q7Z698 418 aa6.23□□□□□ -1.41
BRCA1-224ENST00000497488 ZNF605Q86T29 641 aa6.23□□□□□ -1.41
BRCA1-224ENST00000497488 FAM83AQ86UY5 434 aa6.23□□□□□ -1.41
BRCA1-224ENST00000497488 TMEM200AQ86VY9 491 aa6.23□□□□□ -1.41
BRCA1-224ENST00000497488 P3H2Q8IVL5 708 aa6.23□□□□□ -1.41
BRCA1-224ENST00000497488 GUF1Q8N442 669 aaKnown RBP6.23□□□□□ -1.41
BRCA1-224ENST00000497488 NHLRC2Q8NBF2 726 aa6.23□□□□□ -1.41
BRCA1-224ENST00000497488 PSMA8Q8TAA3 256 aa6.23□□□□□ -1.41
BRCA1-224ENST00000497488 NSMCE1Q8WV22 266 aa6.23□□□□□ -1.41
BRCA1-224ENST00000497488 GLMPQ8WWB7 406 aa6.23□□□□□ -1.41
BRCA1-224ENST00000497488 SGCDQ92629 289 aa6.23□□□□□ -1.41
BRCA1-224ENST00000497488 PRCCQ92733 491 aaPredicted RBP6.23□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms