RNA–Protein interactions for RNA: ENST00000497203.1

SMC4-225, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 490 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-225ENST00000497203 INTS12Q96CB8 462 aaKnown RBP4.24□□□□□ -1.73
SMC4-225ENST00000497203 FCRL4Q96PJ5 515 aa4.24□□□□□ -1.73
SMC4-225ENST00000497203 NUDT16L1Q9BRJ7 211 aaKnown RBP4.24□□□□□ -1.73
SMC4-225ENST00000497203 WDR83Q9BRX9 315 aaKnown RBP4.24□□□□□ -1.73
SMC4-225ENST00000497203 TMEM79Q9BSE2 394 aa4.24□□□□□ -1.73
SMC4-225ENST00000497203 HEMGNQ9BXL5 484 aa4.24□□□□□ -1.73
SMC4-225ENST00000497203 HAUS2Q9NVX0 235 aa4.24□□□□□ -1.73
SMC4-225ENST00000497203 VPS28Q9UK41 221 aa4.24□□□□□ -1.73
SMC4-225ENST00000497203 GPR34Q9UPC5 381 aa4.24□□□□□ -1.73
SMC4-225ENST00000497203 CARD8Q9Y2G2 431 aa4.24□□□□□ -1.73
SMC4-225ENST00000497203 RAP2CQ9Y3L5 183 aa4.24□□□□□ -1.73
SMC4-225ENST00000497203 KCNE2Q9Y6J6 123 aa4.24□□□□□ -1.73
SMC4-225ENST00000497203 RUSC2Q8N2Y8 1516 aa4.24□□□□□ -1.73
SMC4-225ENST00000497203 ZMYM2Q9UBW7 1377 aa4.24□□□□□ -1.73
SMC4-225ENST00000497203 A0A1W2PRG0 241 aa4.23□□□□□ -1.73
SMC4-225ENST00000497203 DYTNA2CJ06 578 aa4.23□□□□□ -1.73
SMC4-225ENST00000497203 CBY3A6NI87 242 aa4.23□□□□□ -1.73
SMC4-225ENST00000497203 USP17L23D6RBM5 183 aa4.23□□□□□ -1.73
SMC4-225ENST00000497203 BCAT2O15382 392 aaPredicted RBP4.23□□□□□ -1.73
SMC4-225ENST00000497203 TGFB1I1O43294 461 aa4.23□□□□□ -1.73
SMC4-225ENST00000497203 CNOT3O75175 753 aaKnown RBP4.23□□□□□ -1.73
SMC4-225ENST00000497203 CENPBP07199 599 aaPredicted RBP4.23□□□□□ -1.73
SMC4-225ENST00000497203 MYZAPP0CAP1 466 aa4.23□□□□□ -1.73
SMC4-225ENST00000497203 ITGB6P18564 788 aa4.23□□□□□ -1.73
SMC4-225ENST00000497203 RFC1P35251 1148 aaPredicted RBP4.23□□□□□ -1.73
SMC4-225ENST00000497203 NR4A2P43354 598 aa4.23□□□□□ -1.73
SMC4-225ENST00000497203 GNAQP50148 359 aa4.23□□□□□ -1.73
SMC4-225ENST00000497203 SLC18A2Q05940 514 aa4.23□□□□□ -1.73
SMC4-225ENST00000497203 TMEM115Q12893 351 aaPredicted RBP4.23□□□□□ -1.73
SMC4-225ENST00000497203 RUNX2Q13950 521 aa4.23□□□□□ -1.73
SMC4-225ENST00000497203 KCTD2Q14681 263 aa4.23□□□□□ -1.73
SMC4-225ENST00000497203 C6orf10Q5SRN2 563 aa4.23□□□□□ -1.73
SMC4-225ENST00000497203 NCEH1Q6PIU2 408 aa4.23□□□□□ -1.73
SMC4-225ENST00000497203 IKBIPQ70UQ0 350 aa4.23□□□□□ -1.73
SMC4-225ENST00000497203 TBC1D26Q86UD7 250 aa4.23□□□□□ -1.73
SMC4-225ENST00000497203 ANKRD13BQ86YJ7 626 aa4.23□□□□□ -1.73
SMC4-225ENST00000497203 SUGP2Q8IX01 1082 aaKnown RBP eCLIP4.23□□□□□ -1.73
SMC4-225ENST00000497203 CMASQ8NFW8 434 aaPredicted RBP4.23□□□□□ -1.73
SMC4-225ENST00000497203 SNRNP27Q8WVK2 155 aaKnown RBP4.23□□□□□ -1.73
SMC4-225ENST00000497203 ATOH1Q92858 354 aaPredicted RBP4.23□□□□□ -1.73
SMC4-225ENST00000497203 OTULINQ96BN8 352 aa4.23□□□□□ -1.73
SMC4-225ENST00000497203 RNF183Q96D59 192 aa4.23□□□□□ -1.73
SMC4-225ENST00000497203 STRA6Q9BX79 667 aa4.23□□□□□ -1.73
SMC4-225ENST00000497203 GHITMQ9H3K2 345 aa4.23□□□□□ -1.73
SMC4-225ENST00000497203 TASP1Q9H6P5 420 aa4.23□□□□□ -1.73
SMC4-225ENST00000497203 AAMDCQ9H7C9 122 aa4.23□□□□□ -1.73
SMC4-225ENST00000497203 SPAG4Q9NPE6 437 aa4.23□□□□□ -1.73
SMC4-225ENST00000497203 THSD1Q9NS62 852 aa4.23□□□□□ -1.73
SMC4-225ENST00000497203 SPATS2LQ9NUQ6 558 aaKnown RBP4.23□□□□□ -1.73
SMC4-225ENST00000497203 HEY2Q9UBP5 337 aa4.23□□□□□ -1.73
SMC4-225ENST00000497203 SEL1LQ9UBV2 794 aa4.23□□□□□ -1.73
SMC4-225ENST00000497203 SLC45A1Q9Y2W3 748 aa4.23□□□□□ -1.73
SMC4-225ENST00000497203 ADGRF5Q8IZF2 1346 aa4.22□□□□□ -1.73
SMC4-225ENST00000497203 LY6G6EA0A0G2JKS1 128 aa4.22□□□□□ -1.73
SMC4-225ENST00000497203 TYW5A2RUC4 315 aaKnown RBP4.22□□□□□ -1.73
SMC4-225ENST00000497203 A6NCN8 305 aa4.22□□□□□ -1.73
SMC4-225ENST00000497203 DDTLA6NHG4 134 aaPredicted RBP4.22□□□□□ -1.73
SMC4-225ENST00000497203 SOCS2O14508 198 aa4.22□□□□□ -1.73
SMC4-225ENST00000497203 HNRNPCL1O60812 293 aaKnown RBP4.22□□□□□ -1.73
SMC4-225ENST00000497203 EIF5BO60841 1220 aaKnown RBP4.22□□□□□ -1.73
SMC4-225ENST00000497203 TSPAN9O75954 239 aa4.22□□□□□ -1.73
SMC4-225ENST00000497203 MT-CYBP00156 380 aaPredicted RBP4.22□□□□□ -1.73
SMC4-225ENST00000497203 TFP02787 698 aa4.22□□□□□ -1.73
SMC4-225ENST00000497203 EIF2S1P05198 315 aaKnown RBP4.22□□□□□ -1.73
SMC4-225ENST00000497203 CTPS1P17812 591 aa4.22□□□□□ -1.73
SMC4-225ENST00000497203 ICAM3P32942 547 aa4.22□□□□□ -1.73
SMC4-225ENST00000497203 PPARGP37231 505 aaPredicted RBP4.22□□□□□ -1.73
SMC4-225ENST00000497203 PRAMEP78395 509 aa4.22□□□□□ -1.73
SMC4-225ENST00000497203 CUL4AQ13619 759 aa4.22□□□□□ -1.73
SMC4-225ENST00000497203 PKP1Q13835 747 aa4.22□□□□□ -1.73
SMC4-225ENST00000497203 CRYMQ14894 314 aa4.22□□□□□ -1.73
SMC4-225ENST00000497203 PPP2R5BQ15173 497 aa4.22□□□□□ -1.73
SMC4-225ENST00000497203 RNPS1Q15287 305 aaKnown RBP4.22□□□□□ -1.73
SMC4-225ENST00000497203 SMTNL2Q2TAL5 461 aa4.22□□□□□ -1.73
SMC4-225ENST00000497203 PIK3CD-AS1Q5SR53 167 aa4.22□□□□□ -1.73
SMC4-225ENST00000497203 TMEM154Q6P9G4 183 aa4.22□□□□□ -1.73
SMC4-225ENST00000497203 SARM1Q6SZW1 724 aa4.22□□□□□ -1.73
SMC4-225ENST00000497203 FAM83HQ6ZRV2 1179 aaPredicted RBP4.22□□□□□ -1.73
SMC4-225ENST00000497203 MRPL10Q7Z7H8 261 aaKnown RBP4.22□□□□□ -1.73
SMC4-225ENST00000497203 TRIM74Q86UV6 250 aa4.22□□□□□ -1.73
SMC4-225ENST00000497203 TRIM73Q86UV7 250 aa4.22□□□□□ -1.73
SMC4-225ENST00000497203 CAMK1DQ8IU85 385 aa4.22□□□□□ -1.73
SMC4-225ENST00000497203 KIAA2013Q8IYS2 634 aa4.22□□□□□ -1.73
SMC4-225ENST00000497203 FRMD1Q8N878 549 aa4.22□□□□□ -1.73
SMC4-225ENST00000497203 LRRC57Q8N9N7 239 aa4.22□□□□□ -1.73
SMC4-225ENST00000497203 RASSF8Q8NHQ8 419 aa4.22□□□□□ -1.73
SMC4-225ENST00000497203 SCFD2Q8WU76 684 aa4.22□□□□□ -1.73
SMC4-225ENST00000497203 GTF3C6Q969F1 213 aa4.22□□□□□ -1.73
SMC4-225ENST00000497203 NSUN4Q96CB9 384 aaKnown RBP4.22□□□□□ -1.73
SMC4-225ENST00000497203 RSRC1Q96IZ7 334 aaKnown RBP4.22□□□□□ -1.73
SMC4-225ENST00000497203 BBS4Q96RK4 519 aa4.22□□□□□ -1.73
SMC4-225ENST00000497203 WDR6Q9NNW5 1121 aaKnown RBP4.22□□□□□ -1.73
SMC4-225ENST00000497203 ASAH2Q9NR71 780 aa4.22□□□□□ -1.73
SMC4-225ENST00000497203 SEPT11Q9NVA2 429 aaKnown RBP4.22□□□□□ -1.73
SMC4-225ENST00000497203 SLCO3A1Q9UIG8 710 aa4.22□□□□□ -1.73
SMC4-225ENST00000497203 HAO1Q9UJM8 370 aa4.22□□□□□ -1.73
SMC4-225ENST00000497203 FAM96BQ9Y3D0 163 aa4.22□□□□□ -1.73
SMC4-225ENST00000497203 ZSCAN21Q9Y5A6 473 aaPredicted RBP4.22□□□□□ -1.73
SMC4-225ENST00000497203 UTYO14607 1347 aa4.21□□□□□ -1.73
SMC4-225ENST00000497203 FAM237BA0A1B0GVD1 139 aa4.21□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms