RNA–Protein interactions for RNA: ENST00000496840.1

TARDBP-210, Transcript of TAR DNA binding protein, humanhuman

TSL 3

Gene TARDBP, Length 692 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-210ENST00000496840 CYP4A11Q02928 519 aa6.14□□□□□ -1.43
TARDBP-210ENST00000496840 POU5F1BQ06416 359 aa6.14□□□□□ -1.43
TARDBP-210ENST00000496840 SLC39A14Q15043 492 aa6.14□□□□□ -1.43
TARDBP-210ENST00000496840 PWP2Q15269 919 aaKnown RBP6.14□□□□□ -1.43
TARDBP-210ENST00000496840 CCDC129Q6ZRS4 1044 aa6.14□□□□□ -1.43
TARDBP-210ENST00000496840 CHD1LQ86WJ1 897 aa6.14□□□□□ -1.43
TARDBP-210ENST00000496840 CPXM2Q8N436 756 aa6.14□□□□□ -1.43
TARDBP-210ENST00000496840 DNASE2BQ8WZ79 361 aa6.14□□□□□ -1.43
TARDBP-210ENST00000496840 CNOT9Q92600 299 aaKnown RBP6.14□□□□□ -1.43
TARDBP-210ENST00000496840 TWNKQ96RR1 684 aa6.14□□□□□ -1.43
TARDBP-210ENST00000496840 ARPC5LQ9BPX5 153 aa6.14□□□□□ -1.43
TARDBP-210ENST00000496840 MMTAG2Q9BU76 263 aaKnown RBP6.14□□□□□ -1.43
TARDBP-210ENST00000496840 ITM2CQ9NQX7 267 aa6.14□□□□□ -1.43
TARDBP-210ENST00000496840 ICAM5Q9UMF0 924 aa6.14□□□□□ -1.43
TARDBP-210ENST00000496840 PAM16Q9Y3D7 125 aa6.14□□□□□ -1.43
TARDBP-210ENST00000496840 CBY3A6NI87 242 aa6.13□□□□□ -1.43
TARDBP-210ENST00000496840 SH2D7A6NKC9 451 aaPredicted RBP6.13□□□□□ -1.43
TARDBP-210ENST00000496840 PEX12O00623 359 aa6.13□□□□□ -1.43
TARDBP-210ENST00000496840 NBNO60934 754 aa6.13□□□□□ -1.43
TARDBP-210ENST00000496840 CH25HO95992 272 aa6.13□□□□□ -1.43
TARDBP-210ENST00000496840 SNRNP70P08621 437 aaKnown RBP6.13□□□□□ -1.43
TARDBP-210ENST00000496840 RYKP34925 604 aa6.13□□□□□ -1.43
TARDBP-210ENST00000496840 GRAMD1BQ3KR37 738 aa6.13□□□□□ -1.43
TARDBP-210ENST00000496840 WBP2NLQ6ICG8 309 aa6.13□□□□□ -1.43
TARDBP-210ENST00000496840 LILRB1Q8NHL6 650 aaPredicted RBP6.13□□□□□ -1.43
TARDBP-210ENST00000496840 GDPD5Q8WTR4 605 aa6.13□□□□□ -1.43
TARDBP-210ENST00000496840 OTULINQ96BN8 352 aa6.13□□□□□ -1.43
TARDBP-210ENST00000496840 IGSF21Q96ID5 467 aa6.13□□□□□ -1.43
TARDBP-210ENST00000496840 LRFN5Q96NI6 719 aa6.13□□□□□ -1.43
TARDBP-210ENST00000496840 CD180Q99467 661 aa6.13□□□□□ -1.43
TARDBP-210ENST00000496840 PYM1Q9BRP8 204 aaKnown RBP6.13□□□□□ -1.43
TARDBP-210ENST00000496840 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP6.13□□□□□ -1.43
TARDBP-210ENST00000496840 EPHX3Q9H6B9 360 aa6.13□□□□□ -1.43
TARDBP-210ENST00000496840 GAREM1Q9H706 876 aa6.13□□□□□ -1.43
TARDBP-210ENST00000496840 OR6C3Q9NZP0 311 aa6.13□□□□□ -1.43
TARDBP-210ENST00000496840 NDRG3Q9UGV2 375 aa6.13□□□□□ -1.43
TARDBP-210ENST00000496840 ADGRF5Q8IZF2 1346 aa6.13□□□□□ -1.43
TARDBP-210ENST00000496840 WNT9BO14905 357 aa6.12□□□□□ -1.43
TARDBP-210ENST00000496840 KLK10O43240 276 aa6.12□□□□□ -1.43
TARDBP-210ENST00000496840 PEX5P50542 639 aa6.12□□□□□ -1.43
TARDBP-210ENST00000496840 C17orf99Q6UX52 265 aa6.12□□□□□ -1.43
TARDBP-210ENST00000496840 CCDC105Q8IYK2 499 aa6.12□□□□□ -1.43
TARDBP-210ENST00000496840 ZNF114Q8NC26 417 aa6.12□□□□□ -1.43
TARDBP-210ENST00000496840 RFWD2Q8NHY2 731 aa6.12□□□□□ -1.43
TARDBP-210ENST00000496840 ADGRG7Q96K78 797 aa6.12□□□□□ -1.43
TARDBP-210ENST00000496840 SLITRK1Q96PX8 696 aa6.12□□□□□ -1.43
TARDBP-210ENST00000496840 TAOK3Q9H2K8 898 aa6.12□□□□□ -1.43
TARDBP-210ENST00000496840 TXLNGQ9NUQ3 528 aa6.12□□□□□ -1.43
TARDBP-210ENST00000496840 NFS1Q9Y697 457 aa6.12□□□□□ -1.43
TARDBP-210ENST00000496840 ARHGAP10A1A4S6 786 aa6.11□□□□□ -1.43
TARDBP-210ENST00000496840 J3KR12 359 aa6.11□□□□□ -1.43
TARDBP-210ENST00000496840 PER2O15055 1255 aa6.11□□□□□ -1.43
TARDBP-210ENST00000496840 CEP104O60308 925 aa6.11□□□□□ -1.43
TARDBP-210ENST00000496840 GAGE7O76087 117 aa6.11□□□□□ -1.43
TARDBP-210ENST00000496840 GAGE12FP0CL80 117 aa6.11□□□□□ -1.43
TARDBP-210ENST00000496840 GAGE12GP0CL81 117 aa6.11□□□□□ -1.43
TARDBP-210ENST00000496840 GAGE12IP0CL82 117 aa6.11□□□□□ -1.43
TARDBP-210ENST00000496840 ZNF8P17098 575 aaPredicted RBP6.11□□□□□ -1.43
TARDBP-210ENST00000496840 PTPN2P17706 415 aa6.11□□□□□ -1.43
TARDBP-210ENST00000496840 SRD5A1P18405 259 aa6.11□□□□□ -1.43
TARDBP-210ENST00000496840 CXCR3P49682 368 aa6.11□□□□□ -1.43
TARDBP-210ENST00000496840 ECT2LQ008S8 904 aa6.11□□□□□ -1.43
TARDBP-210ENST00000496840 GAGE1Q13065 139 aa6.11□□□□□ -1.43
TARDBP-210ENST00000496840 GAGE4Q13068 117 aa6.11□□□□□ -1.43
TARDBP-210ENST00000496840 MYBPHQ13203 477 aa6.11□□□□□ -1.43
TARDBP-210ENST00000496840 XKR9Q5GH70 373 aa6.11□□□□□ -1.43
TARDBP-210ENST00000496840 MAP3K21Q5TCX8 1036 aa6.11□□□□□ -1.43
TARDBP-210ENST00000496840 FAM69BQ5VUD6 431 aa6.11□□□□□ -1.43
TARDBP-210ENST00000496840 REEP2Q9BRK0 252 aa6.11□□□□□ -1.43
TARDBP-210ENST00000496840 MROH8Q9H579 483 aa6.11□□□□□ -1.43
TARDBP-210ENST00000496840 ALKBH4Q9NXW9 302 aa6.11□□□□□ -1.43
TARDBP-210ENST00000496840 PCDHGB5Q9Y5G0 923 aa6.11□□□□□ -1.43
TARDBP-210ENST00000496840 KRT36O76013 467 aa6.1□□□□□ -1.43
TARDBP-210ENST00000496840 IGHV4-30-4P0DP06 118 aa6.1□□□□□ -1.43
TARDBP-210ENST00000496840 TFPIP10646 304 aa6.1□□□□□ -1.43
TARDBP-210ENST00000496840 YWHAZP63104 245 aaKnown RBP6.1□□□□□ -1.43
TARDBP-210ENST00000496840 SNTA1Q13424 505 aa6.1□□□□□ -1.43
TARDBP-210ENST00000496840 EDRF1Q3B7T1 1238 aa6.1□□□□□ -1.43
TARDBP-210ENST00000496840 ZNF672Q499Z4 452 aaPredicted RBP6.1□□□□□ -1.43
TARDBP-210ENST00000496840 BBS12Q6ZW61 710 aa6.1□□□□□ -1.43
TARDBP-210ENST00000496840 RFLNBQ8N5W9 214 aa6.1□□□□□ -1.43
TARDBP-210ENST00000496840 LSM14AQ8ND56 463 aaKnown RBP6.1□□□□□ -1.43
TARDBP-210ENST00000496840 PCDHGB3Q9Y5G1 929 aa6.1□□□□□ -1.43
TARDBP-210ENST00000496840 TCF20Q9UGU0 1960 aaKnown RBP6.09□□□□□ -1.43
TARDBP-210ENST00000496840 ZNF432O94892 652 aa6.09□□□□□ -1.43
TARDBP-210ENST00000496840 ILF3Q12906 894 aaKnown RBP eCLIP6.09□□□□□ -1.43
TARDBP-210ENST00000496840 SF3B4Q15427 424 aaKnown RBP eCLIP6.09□□□□□ -1.438e-7■■□□□ 12.3
TARDBP-210ENST00000496840 ZNF718Q3SXZ3 478 aa6.09□□□□□ -1.43
TARDBP-210ENST00000496840 ZNF628Q5EBL2 1059 aa6.09□□□□□ -1.43
TARDBP-210ENST00000496840 WDR45BQ5MNZ6 344 aa6.09□□□□□ -1.43
TARDBP-210ENST00000496840 PGBD5Q8N414 524 aa6.09□□□□□ -1.43
TARDBP-210ENST00000496840 ARRDC2Q8TBH0 407 aa6.09□□□□□ -1.43
TARDBP-210ENST00000496840 SNAPC3Q92966 411 aa6.09□□□□□ -1.43
TARDBP-210ENST00000496840 BICD1Q96G01 975 aa6.09□□□□□ -1.43
TARDBP-210ENST00000496840 HERPUD2Q9BSE4 406 aa6.09□□□□□ -1.43
TARDBP-210ENST00000496840 RETREG1Q9H6L5 497 aa6.09□□□□□ -1.43
TARDBP-210ENST00000496840 SCN5AQ14524 2016 aa6.08□□□□□ -1.44
TARDBP-210ENST00000496840 TYW5A2RUC4 315 aaKnown RBP6.08□□□□□ -1.44
TARDBP-210ENST00000496840 CPED1A4D0V7 1026 aa6.08□□□□□ -1.44
TARDBP-210ENST00000496840 MAGEA13PA6NCF6 341 aa6.08□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms