RNA–Protein interactions for RNA: ENST00000496468.1

TSSC4-210, Transcript of tumor suppressing subtransferable candidate 4, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene TSSC4, Length 912 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSSC4-210ENST00000496468 TRAF2Q12933 501 aa18.53■□□□□ 0.56
TSSC4-210ENST00000496468 PPP1R7Q15435 360 aa18.53■□□□□ 0.56
TSSC4-210ENST00000496468 ZNF805Q5CZA5 627 aa18.53■□□□□ 0.56
TSSC4-210ENST00000496468 C4orf22Q6V702 233 aa18.53■□□□□ 0.56
TSSC4-210ENST00000496468 PRUNE1Q86TP1 453 aa18.53■□□□□ 0.56
TSSC4-210ENST00000496468 CAMK1DQ8IU85 385 aa18.53■□□□□ 0.56
TSSC4-210ENST00000496468 SPATA22Q8NHS9 363 aa18.53■□□□□ 0.56
TSSC4-210ENST00000496468 SLCO2A1Q92959 643 aa18.53■□□□□ 0.56
TSSC4-210ENST00000496468 ZNF641Q96N77 438 aaPredicted RBP18.53■□□□□ 0.56
TSSC4-210ENST00000496468 KLHL32Q96NJ5 620 aa18.53■□□□□ 0.56
TSSC4-210ENST00000496468 TDRD1Q9BXT4 1180 aaKnown RBP18.53■□□□□ 0.56
TSSC4-210ENST00000496468 TPSD1Q9BZJ3 242 aa18.53■□□□□ 0.56
TSSC4-210ENST00000496468 FAM153AQ9UHL3 310 aa18.53■□□□□ 0.56
TSSC4-210ENST00000496468 RAI2Q9Y5P3 530 aa18.53■□□□□ 0.56
TSSC4-210ENST00000496468 ZDBF2Q9HCK1 2354 aa18.53■□□□□ 0.56
TSSC4-210ENST00000496468 GOLGA6CA6NDK9 693 aa18.52■□□□□ 0.56
TSSC4-210ENST00000496468 GOLGA6BA6NDN3 693 aa18.52■□□□□ 0.56
TSSC4-210ENST00000496468 ANXA9O76027 345 aa18.52■□□□□ 0.56
TSSC4-210ENST00000496468 MT-CYBP00156 380 aaPredicted RBP18.52■□□□□ 0.56
TSSC4-210ENST00000496468 CPP00450 1065 aa18.52■□□□□ 0.56
TSSC4-210ENST00000496468 KRT14P02533 472 aa18.52■□□□□ 0.56
TSSC4-210ENST00000496468 GOLGA6DP0CG33 693 aa18.52■□□□□ 0.56
TSSC4-210ENST00000496468 TNNT3P45378 269 aaPredicted RBP18.52■□□□□ 0.56
TSSC4-210ENST00000496468 PXNP49023 591 aaPredicted RBP18.52■□□□□ 0.56
TSSC4-210ENST00000496468 VPS41P49754 854 aa18.52■□□□□ 0.56
TSSC4-210ENST00000496468 GEMP55040 296 aa18.52■□□□□ 0.56
TSSC4-210ENST00000496468 DHX34Q14147 1143 aaKnown RBP18.52■□□□□ 0.56
TSSC4-210ENST00000496468 TRIP13Q15645 432 aaPredicted RBP18.52■□□□□ 0.56
TSSC4-210ENST00000496468 PCSK7Q16549 785 aa18.52■□□□□ 0.56
TSSC4-210ENST00000496468 PARP6Q2NL67 630 aa18.52■□□□□ 0.56
TSSC4-210ENST00000496468 FAXCQ5TGI0 409 aa18.52■□□□□ 0.56
TSSC4-210ENST00000496468 PARS2Q7L3T8 475 aaKnown RBP18.52■□□□□ 0.56
TSSC4-210ENST00000496468 PRPF39Q86UA1 669 aaKnown RBP18.52■□□□□ 0.56
TSSC4-210ENST00000496468 TAB3Q8N5C8 712 aaPredicted RBP18.52■□□□□ 0.56
TSSC4-210ENST00000496468 GANCQ8TET4 914 aa18.52■□□□□ 0.56
TSSC4-210ENST00000496468 PDCD6IPQ8WUM4 868 aaKnown RBP18.52■□□□□ 0.56
TSSC4-210ENST00000496468 VOPP1Q96AW1 172 aa18.52■□□□□ 0.56
TSSC4-210ENST00000496468 ARRDC3Q96B67 414 aa18.52■□□□□ 0.56
TSSC4-210ENST00000496468 OXNAD1Q96HP4 312 aaPredicted RBP18.52■□□□□ 0.56
TSSC4-210ENST00000496468 NSMCE3Q96MG7 304 aa18.52■□□□□ 0.56
TSSC4-210ENST00000496468 GORASP1Q9BQQ3 440 aa18.52■□□□□ 0.56
TSSC4-210ENST00000496468 SUV39H2Q9H5I1 410 aa18.52■□□□□ 0.56
TSSC4-210ENST00000496468 VPS45Q9NRW7 570 aa18.52■□□□□ 0.56
TSSC4-210ENST00000496468 GOLGA6AQ9NYA3 693 aa18.52■□□□□ 0.56
TSSC4-210ENST00000496468 UBP1Q9NZI7 540 aa18.52■□□□□ 0.56
TSSC4-210ENST00000496468 PCDHGC4Q9Y5F7 938 aa18.52■□□□□ 0.56
TSSC4-210ENST00000496468 A0A1W2PP55 124 aa18.51■□□□□ 0.55
TSSC4-210ENST00000496468 TSPAN11A1L157 253 aa18.51■□□□□ 0.55
TSSC4-210ENST00000496468 CTAGE15A4D2H0 777 aa18.51■□□□□ 0.55
TSSC4-210ENST00000496468 TRAFD1O14545 582 aaPredicted RBP18.51■□□□□ 0.55
TSSC4-210ENST00000496468 HTRA2O43464 458 aaPredicted RBP18.51■□□□□ 0.55
TSSC4-210ENST00000496468 PMPCBO75439 489 aa18.51■□□□□ 0.55
TSSC4-210ENST00000496468 RNASEH2AO75792 299 aaKnown RBP18.51■□□□□ 0.55
TSSC4-210ENST00000496468 CTAGE8P0CG41 777 aa18.51■□□□□ 0.55
TSSC4-210ENST00000496468 C7P10643 843 aa18.51■□□□□ 0.55
TSSC4-210ENST00000496468 RPL22P35268 128 aaKnown RBP18.51■□□□□ 0.55
TSSC4-210ENST00000496468 FDFT1P37268 417 aa18.51■□□□□ 0.55
TSSC4-210ENST00000496468 NEK3P51956 506 aa18.51■□□□□ 0.55
TSSC4-210ENST00000496468 CSTF1Q05048 431 aaKnown RBP18.51■□□□□ 0.55
TSSC4-210ENST00000496468 SFSWAPQ12872 951 aaKnown RBP18.51■□□□□ 0.55
TSSC4-210ENST00000496468 MPP3Q13368 585 aa18.51■□□□□ 0.55
TSSC4-210ENST00000496468 PTK6Q13882 451 aa18.51■□□□□ 0.55
TSSC4-210ENST00000496468 ARMC12Q5T9G4 340 aa18.51■□□□□ 0.55
TSSC4-210ENST00000496468 BRAT1Q6PJG6 821 aa18.51■□□□□ 0.55
TSSC4-210ENST00000496468 TSSK4Q6SA08 328 aa18.51■□□□□ 0.55
TSSC4-210ENST00000496468 CTAGE6Q86UF2 777 aa18.51■□□□□ 0.55
TSSC4-210ENST00000496468 CTAGE4Q8IX94 777 aa18.51■□□□□ 0.55
TSSC4-210ENST00000496468 AADATQ8N5Z0 425 aa18.51■□□□□ 0.55
TSSC4-210ENST00000496468 CEP112Q8N8E3 955 aa18.51■□□□□ 0.55
TSSC4-210ENST00000496468 IPMKQ8NFU5 416 aa18.51■□□□□ 0.55
TSSC4-210ENST00000496468 CCHCR1Q8TD31 782 aa18.51■□□□□ 0.55
TSSC4-210ENST00000496468 TADA1Q96BN2 335 aa18.51■□□□□ 0.55
TSSC4-210ENST00000496468 LRRC45Q96CN5 670 aa18.51■□□□□ 0.55
TSSC4-210ENST00000496468 ECHDC3Q96DC8 303 aa18.51■□□□□ 0.55
TSSC4-210ENST00000496468 OMDQ99983 421 aa18.51■□□□□ 0.55
TSSC4-210ENST00000496468 FSD1LQ9BXM9 530 aa18.51■□□□□ 0.55
TSSC4-210ENST00000496468 RAB6BQ9NRW1 208 aa18.51■□□□□ 0.55
TSSC4-210ENST00000496468 USP36Q9P275 1121 aaKnown RBP18.51■□□□□ 0.55
TSSC4-210ENST00000496468 DKK3Q9UBP4 350 aa18.51■□□□□ 0.55
TSSC4-210ENST00000496468 EBF1Q9UH73 591 aa18.51■□□□□ 0.55
TSSC4-210ENST00000496468 FBXO4Q9UKT5 387 aa18.51■□□□□ 0.55
TSSC4-210ENST00000496468 AAR2Q9Y312 384 aaKnown RBP18.51■□□□□ 0.55
TSSC4-210ENST00000496468 A0A1W2PQ67 120 aa18.5■□□□□ 0.55
TSSC4-210ENST00000496468 AXIN1O15169 862 aa18.5■□□□□ 0.55
TSSC4-210ENST00000496468 PGLSO95336 258 aa18.5■□□□□ 0.55
TSSC4-210ENST00000496468 METTL18O95568 372 aa18.5■□□□□ 0.55
TSSC4-210ENST00000496468 TDGF1P13385 188 aa18.5■□□□□ 0.55
TSSC4-210ENST00000496468 HOXA6P31267 233 aa18.5■□□□□ 0.55
TSSC4-210ENST00000496468 DRD3P35462 400 aa18.5■□□□□ 0.55
TSSC4-210ENST00000496468 BASP1P80723 227 aaKnown RBP18.5■□□□□ 0.55
TSSC4-210ENST00000496468 KCTD19Q17RG1 926 aaPredicted RBP18.5■□□□□ 0.55
TSSC4-210ENST00000496468 SYDE1Q6ZW31 735 aaPredicted RBP18.5■□□□□ 0.55
TSSC4-210ENST00000496468 USP30Q70CQ3 517 aa18.5■□□□□ 0.55
TSSC4-210ENST00000496468 ERN2Q76MJ5 926 aaKnown RBP18.5■□□□□ 0.55
TSSC4-210ENST00000496468 KBTBD6Q86V97 674 aa18.5■□□□□ 0.55
TSSC4-210ENST00000496468 JAMLQ86YT9 394 aa18.5■□□□□ 0.55
TSSC4-210ENST00000496468 MAML2Q8IZL2 1156 aaPredicted RBP18.5■□□□□ 0.55
TSSC4-210ENST00000496468 HDDC3Q8N4P3 179 aa18.5■□□□□ 0.55
TSSC4-210ENST00000496468 IFT43Q96FT9 208 aa18.5■□□□□ 0.55
TSSC4-210ENST00000496468 MLPHQ9BV36 600 aaPredicted RBP18.5■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms