RNA–Protein interactions for RNA: ENST00000496458.1

SF3B1-212, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 475 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-212ENST00000496458 ANKRD10Q9NXR5 420 aa5.89□□□□□ -1.47
SF3B1-212ENST00000496458 PCDHGB5Q9Y5G0 923 aa5.89□□□□□ -1.47
SF3B1-212ENST00000496458 ADGRF5Q8IZF2 1346 aa5.89□□□□□ -1.47
SF3B1-212ENST00000496458 CKAP5Q14008 2032 aa5.89□□□□□ -1.47
SF3B1-212ENST00000496458 IGLV5-52A0A0A0MRZ9 124 aa5.88□□□□□ -1.47
SF3B1-212ENST00000496458 EME2A4GXA9 379 aaPredicted RBP5.88□□□□□ -1.47
SF3B1-212ENST00000496458 PLEKHD1A6NEE1 506 aa5.88□□□□□ -1.47
SF3B1-212ENST00000496458 CBY3A6NI87 242 aa5.88□□□□□ -1.47
SF3B1-212ENST00000496458 BLKP51451 505 aa5.88□□□□□ -1.47
SF3B1-212ENST00000496458 ST3GAL1Q11201 340 aa5.88□□□□□ -1.47
SF3B1-212ENST00000496458 TDGQ13569 410 aa5.88□□□□□ -1.47
SF3B1-212ENST00000496458 RUNX2Q13950 521 aa5.88□□□□□ -1.47
SF3B1-212ENST00000496458 EFHC1Q5JVL4 640 aa5.88□□□□□ -1.47
SF3B1-212ENST00000496458 CES5AQ6NT32 575 aa5.88□□□□□ -1.47
SF3B1-212ENST00000496458 PRSS57Q6UWY2 283 aa5.88□□□□□ -1.47
SF3B1-212ENST00000496458 RUFY2Q8WXA3 655 aa5.88□□□□□ -1.47
SF3B1-212ENST00000496458 RTP4Q96DX8 246 aa5.88□□□□□ -1.47
SF3B1-212ENST00000496458 LMLNQ96KR4 655 aa5.88□□□□□ -1.47
SF3B1-212ENST00000496458 SCLT1Q96NL6 688 aa5.88□□□□□ -1.47
SF3B1-212ENST00000496458 SLC45A1Q9Y2W3 748 aa5.88□□□□□ -1.47
SF3B1-212ENST00000496458 LOC102724159A0A0B4J2E5 919 aa5.87□□□□□ -1.47
SF3B1-212ENST00000496458 PPP1R3DO95685 299 aa5.87□□□□□ -1.47
SF3B1-212ENST00000496458 CCR5P51681 352 aa5.87□□□□□ -1.47
SF3B1-212ENST00000496458 PWP2Q15269 919 aaKnown RBP5.87□□□□□ -1.47
SF3B1-212ENST00000496458 TAF12Q16514 161 aa5.87□□□□□ -1.47
SF3B1-212ENST00000496458 C9orf57Q5W0N0 161 aa5.87□□□□□ -1.47
SF3B1-212ENST00000496458 C16orf82Q7Z2V1 217 aa5.87□□□□□ -1.47
SF3B1-212ENST00000496458 ARMC9Q7Z3E5 817 aa5.87□□□□□ -1.47
SF3B1-212ENST00000496458 LRRTM4Q86VH4 590 aa5.87□□□□□ -1.47
SF3B1-212ENST00000496458 SFTPA2Q8IWL1 248 aa5.87□□□□□ -1.47
SF3B1-212ENST00000496458 ARRDC2Q8TBH0 407 aa5.87□□□□□ -1.47
SF3B1-212ENST00000496458 HERVK_113Q902F9 699 aa5.87□□□□□ -1.47
SF3B1-212ENST00000496458 TRIB2Q92519 343 aa5.87□□□□□ -1.47
SF3B1-212ENST00000496458 GCC1Q96CN9 775 aa5.87□□□□□ -1.47
SF3B1-212ENST00000496458 OR6C3Q9NZP0 311 aa5.87□□□□□ -1.47
SF3B1-212ENST00000496458 NDRG3Q9UGV2 375 aa5.87□□□□□ -1.47
SF3B1-212ENST00000496458 HSF4Q9ULV5 492 aa5.87□□□□□ -1.47
SF3B1-212ENST00000496458 PAM16Q9Y3D7 125 aa5.87□□□□□ -1.47
SF3B1-212ENST00000496458 DGKBQ9Y6T7 804 aa5.87□□□□□ -1.47
SF3B1-212ENST00000496458 BTBD18B2RXH4 712 aa5.86□□□□□ -1.47
SF3B1-212ENST00000496458 J3KR12 359 aa5.86□□□□□ -1.47
SF3B1-212ENST00000496458 CH25HO95992 272 aa5.86□□□□□ -1.47
SF3B1-212ENST00000496458 SLC2A4P14672 509 aa5.86□□□□□ -1.47
SF3B1-212ENST00000496458 ZNF8P17098 575 aaPredicted RBP5.86□□□□□ -1.47
SF3B1-212ENST00000496458 SRD5A1P18405 259 aa5.86□□□□□ -1.47
SF3B1-212ENST00000496458 RYKP34925 604 aa5.86□□□□□ -1.47
SF3B1-212ENST00000496458 CXCR3P49682 368 aa5.86□□□□□ -1.47
SF3B1-212ENST00000496458 HDAC4P56524 1084 aa5.86□□□□□ -1.47
SF3B1-212ENST00000496458 YWHAZP63104 245 aaKnown RBP5.86□□□□□ -1.47
SF3B1-212ENST00000496458 CHRNDQ07001 517 aa5.86□□□□□ -1.47
SF3B1-212ENST00000496458 GRSF1Q12849 480 aaKnown RBP eCLIP5.86□□□□□ -1.47
SF3B1-212ENST00000496458 ZNF667Q5HYK9 610 aa5.86□□□□□ -1.47
SF3B1-212ENST00000496458 RETSATQ6NUM9 610 aa5.86□□□□□ -1.47
SF3B1-212ENST00000496458 LIN28BQ6ZN17 250 aaKnown RBP eCLIP5.86□□□□□ -1.47
SF3B1-212ENST00000496458 H1FNTQ75WM6 255 aaPredicted RBP5.86□□□□□ -1.47
SF3B1-212ENST00000496458 TCP11L2Q8N4U5 519 aa5.86□□□□□ -1.47
SF3B1-212ENST00000496458 AADATQ8N5Z0 425 aa5.86□□□□□ -1.47
SF3B1-212ENST00000496458 ELP4Q96EB1 424 aa5.86□□□□□ -1.47
SF3B1-212ENST00000496458 TTYH1Q9H313 450 aaPredicted RBP5.86□□□□□ -1.47
SF3B1-212ENST00000496458 PEMTQ9UBM1 199 aa5.86□□□□□ -1.47
SF3B1-212ENST00000496458 HSPB2A8KAH6 182 aa5.85□□□□□ -1.47
SF3B1-212ENST00000496458 RGS11O94810 467 aa5.85□□□□□ -1.47
SF3B1-212ENST00000496458 VNN2O95498 520 aa5.85□□□□□ -1.47
SF3B1-212ENST00000496458 HSD3B1P14060 373 aa5.85□□□□□ -1.47
SF3B1-212ENST00000496458 PGM1P36871 562 aa5.85□□□□□ -1.47
SF3B1-212ENST00000496458 COMPP49747 757 aaPredicted RBP5.85□□□□□ -1.47
SF3B1-212ENST00000496458 GAS1P54826 345 aa5.85□□□□□ -1.47
SF3B1-212ENST00000496458 TUBA1BP68363 451 aa5.85□□□□□ -1.47
SF3B1-212ENST00000496458 HSPB2Q16082 182 aa5.85□□□□□ -1.47
SF3B1-212ENST00000496458 NFIL3Q16649 462 aa5.85□□□□□ -1.47
SF3B1-212ENST00000496458 TBC1D26Q86UD7 250 aa5.85□□□□□ -1.47
SF3B1-212ENST00000496458 FAM160B2Q86V87 743 aa5.85□□□□□ -1.47
SF3B1-212ENST00000496458 KRTAP2-2Q9BYT5 123 aa5.85□□□□□ -1.47
SF3B1-212ENST00000496458 IL25Q9H293 177 aa5.85□□□□□ -1.47
SF3B1-212ENST00000496458 CYSLTR2Q9NS75 346 aa5.85□□□□□ -1.47
SF3B1-212ENST00000496458 IL1RAPL1Q9NZN1 696 aa5.85□□□□□ -1.47
SF3B1-212ENST00000496458 PLSCR5A0PG75 271 aa5.84□□□□□ -1.47
SF3B1-212ENST00000496458 PTPN2P17706 415 aa5.84□□□□□ -1.47
SF3B1-212ENST00000496458 CNTFP26441 200 aa5.84□□□□□ -1.47
SF3B1-212ENST00000496458 FMO4P31512 558 aa5.84□□□□□ -1.47
SF3B1-212ENST00000496458 GPD2P43304 727 aa5.84□□□□□ -1.47
SF3B1-212ENST00000496458 DDR1Q08345 913 aa5.84□□□□□ -1.47
SF3B1-212ENST00000496458 COASYQ13057 564 aa5.84□□□□□ -1.47
SF3B1-212ENST00000496458 SLC39A14Q15043 492 aa5.84□□□□□ -1.47
SF3B1-212ENST00000496458 ARHGEF6Q15052 776 aa5.84□□□□□ -1.47
SF3B1-212ENST00000496458 ESCO2Q56NI9 601 aa5.84□□□□□ -1.47
SF3B1-212ENST00000496458 SLC22A25Q6T423 547 aa5.84□□□□□ -1.47
SF3B1-212ENST00000496458 KLHL24Q6TFL4 600 aa5.84□□□□□ -1.47
SF3B1-212ENST00000496458 CCDC129Q6ZRS4 1044 aa5.84□□□□□ -1.47
SF3B1-212ENST00000496458 PARP16Q8N5Y8 322 aa5.84□□□□□ -1.47
SF3B1-212ENST00000496458 GJC3Q8NFK1 279 aa5.84□□□□□ -1.47
SF3B1-212ENST00000496458 TNIP2Q8NFZ5 429 aa5.84□□□□□ -1.47
SF3B1-212ENST00000496458 OTULINQ96BN8 352 aa5.84□□□□□ -1.47
SF3B1-212ENST00000496458 ZC3HAV1LQ96H79 300 aaKnown RBP5.84□□□□□ -1.47
SF3B1-212ENST00000496458 NUF2Q9BZD4 464 aa5.84□□□□□ -1.47
SF3B1-212ENST00000496458 PLSCR4Q9NRQ2 329 aa5.84□□□□□ -1.47
SF3B1-212ENST00000496458 SNTG1Q9NSN8 517 aa5.84□□□□□ -1.47
SF3B1-212ENST00000496458 BABAM1Q9NWV8 329 aa5.84□□□□□ -1.47
SF3B1-212ENST00000496458 CTNNAL1Q9UBT7 734 aa5.84□□□□□ -1.47
SF3B1-212ENST00000496458 ABCC9O60706 1549 aa5.84□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms