RNA–Protein interactions for RNA: ENST00000496269.1

PCOLCE-210, Transcript of procollagen C-endopeptidase enhancer, humanhuman

TSL 2

Gene PCOLCE, Length 995 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCOLCE-210ENST00000496269 NSUN2Q08J23 767 aaKnown RBP eCLIP22.33■■□□□ 1.17
PCOLCE-210ENST00000496269 LBRQ14739 615 aaKnown RBP22.33■■□□□ 1.17
PCOLCE-210ENST00000496269 PDK2Q15119 407 aa22.33■■□□□ 1.17
PCOLCE-210ENST00000496269 ANKRD20A8PQ5CZ79 823 aa22.33■■□□□ 1.17
PCOLCE-210ENST00000496269 LRRC73Q5JTD7 316 aa22.33■■□□□ 1.17
PCOLCE-210ENST00000496269 SRLQ86TD4 932 aa22.33■■□□□ 1.17
PCOLCE-210ENST00000496269 PGBD5Q8N414 524 aa22.33■■□□□ 1.17
PCOLCE-210ENST00000496269 HCAR2Q8TDS4 363 aa22.33■■□□□ 1.17
PCOLCE-210ENST00000496269 RAPGEF5Q92565 580 aa22.33■■□□□ 1.17
PCOLCE-210ENST00000496269 PANX2Q96RD6 677 aa22.33■■□□□ 1.17
PCOLCE-210ENST00000496269 TUBGCP5Q96RT8 1024 aa22.33■■□□□ 1.17
PCOLCE-210ENST00000496269 KLF6Q99612 283 aaPredicted RBP22.33■■□□□ 1.17
PCOLCE-210ENST00000496269 GPR27Q9NS67 375 aa22.33■■□□□ 1.17
PCOLCE-210ENST00000496269 PCOLCE2Q9UKZ9 415 aa22.33■■□□□ 1.17
PCOLCE-210ENST00000496269 WASF3Q9UPY6 502 aa22.33■■□□□ 1.17
PCOLCE-210ENST00000496269 BTBD3Q9Y2F9 522 aa22.33■■□□□ 1.17
PCOLCE-210ENST00000496269 RAD51BO15315 384 aa22.32■■□□□ 1.16
PCOLCE-210ENST00000496269 TSPAN6O43657 245 aa22.32■■□□□ 1.16
PCOLCE-210ENST00000496269 PCDHGA12O60330 932 aa22.32■■□□□ 1.16
PCOLCE-210ENST00000496269 KRT7P08729 469 aa22.32■■□□□ 1.16
PCOLCE-210ENST00000496269 ITIH2P19823 946 aa22.32■■□□□ 1.16
PCOLCE-210ENST00000496269 KCNA4P22459 653 aa22.32■■□□□ 1.16
PCOLCE-210ENST00000496269 HNRNPA2B1P22626 353 aaKnown RBP22.32■■□□□ 1.16
PCOLCE-210ENST00000496269 SERPINB6P35237 376 aa22.32■■□□□ 1.16
PCOLCE-210ENST00000496269 RPS21P63220 83 aaKnown RBP22.32■■□□□ 1.16
PCOLCE-210ENST00000496269 GALNT2Q10471 571 aa22.32■■□□□ 1.16
PCOLCE-210ENST00000496269 OVGP1Q12889 678 aa22.32■■□□□ 1.16
PCOLCE-210ENST00000496269 ABI3BPQ7Z7G0 1075 aa22.32■■□□□ 1.16
PCOLCE-210ENST00000496269 CCDC170Q8IYT3 715 aa22.32■■□□□ 1.16
PCOLCE-210ENST00000496269 ASB12Q8WXK4 309 aa22.32■■□□□ 1.16
PCOLCE-210ENST00000496269 ECHDC3Q96DC8 303 aa22.32■■□□□ 1.16
PCOLCE-210ENST00000496269 ELF4Q99607 663 aaPredicted RBP22.32■■□□□ 1.16
PCOLCE-210ENST00000496269 MYOCQ99972 504 aa22.32■■□□□ 1.16
PCOLCE-210ENST00000496269 CINPQ9BW66 212 aaPredicted RBP22.32■■□□□ 1.16
PCOLCE-210ENST00000496269 SUV39H2Q9H5I1 410 aa22.32■■□□□ 1.16
PCOLCE-210ENST00000496269 ZNF487B1APH4 448 aa22.31■■□□□ 1.16
PCOLCE-210ENST00000496269 KDELR1P24390 212 aa22.31■■□□□ 1.16
PCOLCE-210ENST00000496269 CCT8P50990 548 aa22.31■■□□□ 1.16
PCOLCE-210ENST00000496269 GRM3Q14832 879 aa22.31■■□□□ 1.16
PCOLCE-210ENST00000496269 PRAMEF14Q5SWL7 426 aa22.31■■□□□ 1.16
PCOLCE-210ENST00000496269 KANSL1Q7Z3B3 1105 aa22.31■■□□□ 1.16
PCOLCE-210ENST00000496269 ZSCAN30Q86W11 494 aa22.31■■□□□ 1.16
PCOLCE-210ENST00000496269 CAMK1DQ8IU85 385 aa22.31■■□□□ 1.16
PCOLCE-210ENST00000496269 KCTD6Q8NC69 237 aa22.31■■□□□ 1.16
PCOLCE-210ENST00000496269 FEM1CQ96JP0 617 aa22.31■■□□□ 1.16
PCOLCE-210ENST00000496269 BMFQ96LC9 184 aa22.31■■□□□ 1.16
PCOLCE-210ENST00000496269 ZNF641Q96N77 438 aaPredicted RBP22.31■■□□□ 1.16
PCOLCE-210ENST00000496269 CALN1Q9BXU9 219 aa22.31■■□□□ 1.16
PCOLCE-210ENST00000496269 SLC17A9Q9BYT1 436 aa22.31■■□□□ 1.16
PCOLCE-210ENST00000496269 SLC32A1Q9H598 525 aa22.31■■□□□ 1.16
PCOLCE-210ENST00000496269 ERVMER34-1Q9H9K5 563 aa22.31■■□□□ 1.16
PCOLCE-210ENST00000496269 SEPT3Q9UH03 358 aa22.31■■□□□ 1.16
PCOLCE-210ENST00000496269 TFR2Q9UP52 801 aa22.31■■□□□ 1.16
PCOLCE-210ENST00000496269 SPAARA0A1B0GVQ0 90 aa22.3■■□□□ 1.16
PCOLCE-210ENST00000496269 IGLON5A6NGN9 336 aa22.3■■□□□ 1.16
PCOLCE-210ENST00000496269 TRAFD1O14545 582 aaPredicted RBP22.3■■□□□ 1.16
PCOLCE-210ENST00000496269 DFNA5O60443 496 aa22.3■■□□□ 1.16
PCOLCE-210ENST00000496269 MAGEA1P43355 309 aa22.3■■□□□ 1.16
PCOLCE-210ENST00000496269 SLC45A4Q5BKX6 768 aa22.3■■□□□ 1.16
PCOLCE-210ENST00000496269 VSIG1Q86XK7 387 aa22.3■■□□□ 1.16
PCOLCE-210ENST00000496269 ATPAF2Q8N5M1 289 aa22.3■■□□□ 1.16
PCOLCE-210ENST00000496269 TEX26Q8N6G2 289 aa22.3■■□□□ 1.16
PCOLCE-210ENST00000496269 SKA1Q96BD8 255 aa22.3■■□□□ 1.16
PCOLCE-210ENST00000496269 LENG8Q96PV6 779 aaPredicted RBP22.3■■□□□ 1.16
PCOLCE-210ENST00000496269 MGME1Q9BQP7 344 aa22.3■■□□□ 1.16
PCOLCE-210ENST00000496269 GDF3Q9NR23 364 aa22.3■■□□□ 1.16
PCOLCE-210ENST00000496269 REXO2Q9Y3B8 237 aaKnown RBP22.3■■□□□ 1.16
PCOLCE-210ENST00000496269 ARID1BQ8NFD5 2236 aaPredicted RBP22.3■■□□□ 1.16
PCOLCE-210ENST00000496269 SOWAHDA6NJG2 315 aa22.29■■□□□ 1.16
PCOLCE-210ENST00000496269 FLRT2O43155 660 aa22.29■■□□□ 1.16
PCOLCE-210ENST00000496269 AKT2P31751 481 aa22.29■■□□□ 1.16
PCOLCE-210ENST00000496269 GARSP41250 739 aaKnown RBP22.29■■□□□ 1.16
PCOLCE-210ENST00000496269 RXRGP48443 463 aa22.29■■□□□ 1.16
PCOLCE-210ENST00000496269 SUOXP51687 545 aa22.29■■□□□ 1.16
PCOLCE-210ENST00000496269 CLDN2P57739 230 aa22.29■■□□□ 1.16
PCOLCE-210ENST00000496269 IL9RQ01113 521 aa22.29■■□□□ 1.16
PCOLCE-210ENST00000496269 SLC10A2Q12908 348 aaPredicted RBP22.29■■□□□ 1.16
PCOLCE-210ENST00000496269 STAT4Q14765 748 aa22.29■■□□□ 1.16
PCOLCE-210ENST00000496269 TMEM52BQ4KMG9 183 aa22.29■■□□□ 1.16
PCOLCE-210ENST00000496269 LRRC38Q5VT99 294 aa22.29■■□□□ 1.16
PCOLCE-210ENST00000496269 GLRX5Q86SX6 157 aa22.29■■□□□ 1.16
PCOLCE-210ENST00000496269 TTC7BQ86TV6 843 aa22.29■■□□□ 1.16
PCOLCE-210ENST00000496269 TMEM139Q8IV31 216 aa22.29■■□□□ 1.16
PCOLCE-210ENST00000496269 SLC22A18ASQ8N1D0 253 aa22.29■■□□□ 1.16
PCOLCE-210ENST00000496269 OR13H1Q8NG92 308 aa22.29■■□□□ 1.16
PCOLCE-210ENST00000496269 SPOCK2Q92563 424 aa22.29■■□□□ 1.16
PCOLCE-210ENST00000496269 MAML1Q92585 1016 aa22.29■■□□□ 1.16
PCOLCE-210ENST00000496269 RNF157Q96PX1 679 aa22.29■■□□□ 1.16
PCOLCE-210ENST00000496269 SALL4Q9UJQ4 1053 aa22.29■■□□□ 1.16
PCOLCE-210ENST00000496269 HYOU1Q9Y4L1 999 aa22.29■■□□□ 1.16
PCOLCE-210ENST00000496269 PCDHA13Q9Y5I0 950 aa22.29■■□□□ 1.16
PCOLCE-210ENST00000496269 SPEGQ15772 3267 aa22.28■■□□□ 1.16
PCOLCE-210ENST00000496269 TTC24A2A3L6 582 aaPredicted RBP22.28■■□□□ 1.16
PCOLCE-210ENST00000496269 RCCD1A6NED2 376 aa22.28■■□□□ 1.16
PCOLCE-210ENST00000496269 POM121BA6NF01 834 aa22.28■■□□□ 1.16
PCOLCE-210ENST00000496269 PAK4O96013 591 aaPredicted RBP22.28■■□□□ 1.16
PCOLCE-210ENST00000496269 EPHA8P29322 1005 aaPredicted RBP22.28■■□□□ 1.16
PCOLCE-210ENST00000496269 AP1S1P61966 158 aa22.28■■□□□ 1.16
PCOLCE-210ENST00000496269 GBE1Q04446 702 aa22.28■■□□□ 1.16
PCOLCE-210ENST00000496269 HNRNPDQ14103 355 aaKnown RBP22.28■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms