RNA–Protein interactions for RNA: ENST00000496104.1

XPA-204, Transcript of XPA, DNA damage recognition and repair factor, humanhuman

TSL 3

Gene XPA, Length 429 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XPA-204ENST00000496104 ORC3Q9UBD5 711 aaPredicted RBP4.85□□□□□ -1.63
XPA-204ENST00000496104 CDC23Q9UJX2 597 aa4.85□□□□□ -1.63
XPA-204ENST00000496104 TP53TG5Q9Y2B4 290 aa4.85□□□□□ -1.63
XPA-204ENST00000496104 SIK3Q9Y2K2 1263 aa4.85□□□□□ -1.63
XPA-204ENST00000496104 PCDHGA9Q9Y5G4 932 aaKnown RBP4.85□□□□□ -1.63
XPA-204ENST00000496104 PCDHGA7Q9Y5G6 932 aa4.85□□□□□ -1.63
XPA-204ENST00000496104 PCDHGA6Q9Y5G7 932 aa4.85□□□□□ -1.63
XPA-204ENST00000496104 PCDHGA3Q9Y5H0 932 aa4.85□□□□□ -1.63
XPA-204ENST00000496104 NPFFR2Q9Y5X5 522 aa4.85□□□□□ -1.63
XPA-204ENST00000496104 FHOD1Q9Y613 1164 aa4.85□□□□□ -1.63
XPA-204ENST00000496104 IKBKGQ9Y6K9 419 aa4.85□□□□□ -1.63
XPA-204ENST00000496104 NOTCH1P46531 2555 aa4.84□□□□□ -1.63
XPA-204ENST00000496104 A6NLC8 198 aa4.84□□□□□ -1.63
XPA-204ENST00000496104 TCP11X1B4DZS4 312 aa4.84□□□□□ -1.63
XPA-204ENST00000496104 GOLGA6L22H0YM25 854 aa4.84□□□□□ -1.63
XPA-204ENST00000496104 MASP2O00187 686 aa4.84□□□□□ -1.63
XPA-204ENST00000496104 GSTA4O15217 222 aa4.84□□□□□ -1.63
XPA-204ENST00000496104 KCNAB3O43448 404 aa4.84□□□□□ -1.63
XPA-204ENST00000496104 TRAPPC3O43617 180 aa4.84□□□□□ -1.63
XPA-204ENST00000496104 USO1O60763 962 aaKnown RBP4.84□□□□□ -1.63
XPA-204ENST00000496104 PSMD10O75832 226 aa4.84□□□□□ -1.63
XPA-204ENST00000496104 INMTO95050 263 aa4.84□□□□□ -1.63
XPA-204ENST00000496104 KCNH1O95259 989 aa4.84□□□□□ -1.63
XPA-204ENST00000496104 NADKO95544 446 aaPredicted RBP4.84□□□□□ -1.63
XPA-204ENST00000496104 C4BPAP04003 597 aaKnown RBP4.84□□□□□ -1.63
XPA-204ENST00000496104 THEGLP0DJG4 465 aa4.84□□□□□ -1.63
XPA-204ENST00000496104 GLRA2P23416 452 aa4.84□□□□□ -1.63
XPA-204ENST00000496104 DDX6P26196 483 aaKnown RBP eCLIP4.84□□□□□ -1.63
XPA-204ENST00000496104 RBMS1P29558 406 aaKnown RBP4.84□□□□□ -1.63
XPA-204ENST00000496104 ANP32AP39687 249 aaKnown RBP4.84□□□□□ -1.63
XPA-204ENST00000496104 NPTX2P47972 431 aa4.84□□□□□ -1.63
XPA-204ENST00000496104 CASP5P51878 434 aa4.84□□□□□ -1.63
XPA-204ENST00000496104 ANTXR2P58335 489 aa4.84□□□□□ -1.63
XPA-204ENST00000496104 DCAF7P61962 342 aa4.84□□□□□ -1.63
XPA-204ENST00000496104 ATP2C1P98194 919 aaPredicted RBP4.84□□□□□ -1.63
XPA-204ENST00000496104 E2F1Q01094 437 aa4.84□□□□□ -1.63
XPA-204ENST00000496104 GUCY1A3Q02108 690 aa4.84□□□□□ -1.63
XPA-204ENST00000496104 ENPP2Q13822 863 aa4.84□□□□□ -1.63
XPA-204ENST00000496104 EMC2Q15006 297 aa4.84□□□□□ -1.63
XPA-204ENST00000496104 MEA1Q16626 185 aa4.84□□□□□ -1.63
XPA-204ENST00000496104 ARHGAP44Q17R89 818 aa4.84□□□□□ -1.63
XPA-204ENST00000496104 DUOXA2Q1HG44 320 aa4.84□□□□□ -1.63
XPA-204ENST00000496104 MSMPQ1L6U9 139 aa4.84□□□□□ -1.63
XPA-204ENST00000496104 INF2Q27J81 1249 aa4.84□□□□□ -1.63
XPA-204ENST00000496104 ANO6Q4KMQ2 910 aa4.84□□□□□ -1.63
XPA-204ENST00000496104 CCDC178Q5BJE1 867 aa4.84□□□□□ -1.63
XPA-204ENST00000496104 DNAJC21Q5F1R6 531 aaKnown RBP4.84□□□□□ -1.63
XPA-204ENST00000496104 FAM209BQ5JX69 171 aa4.84□□□□□ -1.63
XPA-204ENST00000496104 LY6G5CQ5SRR4 150 aa4.84□□□□□ -1.63
XPA-204ENST00000496104 SDHAF4Q5VUM1 108 aa4.84□□□□□ -1.63
XPA-204ENST00000496104 SEZ6L2Q6UXD5 910 aa4.84□□□□□ -1.63
XPA-204ENST00000496104 FAM214BQ7L5A3 538 aa4.84□□□□□ -1.63
XPA-204ENST00000496104 KDELC2Q7Z4H8 507 aa4.84□□□□□ -1.63
XPA-204ENST00000496104 CACUL1Q86Y37 369 aa4.84□□□□□ -1.63
XPA-204ENST00000496104 ITPRIPQ8IWB1 547 aa4.84□□□□□ -1.63
XPA-204ENST00000496104 ZC3H7AQ8IWR0 971 aaKnown RBP4.84□□□□□ -1.63
XPA-204ENST00000496104 ZNF276Q8N554 614 aa4.84□□□□□ -1.63
XPA-204ENST00000496104 ZMIZ2Q8NF64 920 aa4.84□□□□□ -1.63
XPA-204ENST00000496104 ZFPM2Q8WW38 1151 aa4.84□□□□□ -1.63
XPA-204ENST00000496104 WBP2Q969T9 261 aa4.84□□□□□ -1.63
XPA-204ENST00000496104 SH3KBP1Q96B97 665 aa4.84□□□□□ -1.63
XPA-204ENST00000496104 RRP36Q96EU6 259 aaKnown RBP4.84□□□□□ -1.63
XPA-204ENST00000496104 MVB12AQ96EY5 273 aa4.84□□□□□ -1.63
XPA-204ENST00000496104 FAM46AQ96IP4 442 aaKnown RBP4.84□□□□□ -1.63
XPA-204ENST00000496104 UROC1Q96N76 676 aa4.84□□□□□ -1.63
XPA-204ENST00000496104 SEPT5Q99719 369 aaPredicted RBP4.84□□□□□ -1.63
XPA-204ENST00000496104 NFKBIZQ9BYH8 718 aa4.84□□□□□ -1.63
XPA-204ENST00000496104 GTPBP4Q9BZE4 634 aaKnown RBP4.84□□□□□ -1.63
XPA-204ENST00000496104 ACSS3Q9H6R3 686 aa4.84□□□□□ -1.63
XPA-204ENST00000496104 ABCF3Q9NUQ8 709 aa4.84□□□□□ -1.63
XPA-204ENST00000496104 MRGBPQ9NV56 204 aa4.84□□□□□ -1.63
XPA-204ENST00000496104 PRR13Q9NZ81 148 aa4.84□□□□□ -1.63
XPA-204ENST00000496104 FOXJ2Q9P0K8 574 aa4.84□□□□□ -1.63
XPA-204ENST00000496104 GIMAP2Q9UG22 337 aa4.84□□□□□ -1.63
XPA-204ENST00000496104 KCND3Q9UK17 655 aa4.84□□□□□ -1.63
XPA-204ENST00000496104 ARHGAP26Q9UNA1 814 aa4.84□□□□□ -1.63
XPA-204ENST00000496104 GDAQ9Y2T3 454 aa4.84□□□□□ -1.63
XPA-204ENST00000496104 TRAF6Q9Y4K3 522 aa4.84□□□□□ -1.63
XPA-204ENST00000496104 CEP83Q9Y592 693 aa4.84□□□□□ -1.63
XPA-204ENST00000496104 ACTL7BQ9Y614 415 aa4.84□□□□□ -1.63
XPA-204ENST00000496104 BIRC6Q9NR09 4857 aa4.83□□□□□ -1.64
XPA-204ENST00000496104 GOLGA8AA7E2F4 631 aa4.83□□□□□ -1.64
XPA-204ENST00000496104 GOLGA8BA8MQT2 603 aa4.83□□□□□ -1.64
XPA-204ENST00000496104 LEFTY2O00292 366 aa4.83□□□□□ -1.64
XPA-204ENST00000496104 DDX3XO00571 662 aaKnown RBP eCLIP4.83□□□□□ -1.645e-11■■■□□ 15.2
XPA-204ENST00000496104 PPEF2O14830 753 aa4.83□□□□□ -1.64
XPA-204ENST00000496104 P4HA2O15460 535 aa4.83□□□□□ -1.64
XPA-204ENST00000496104 HOXC11O43248 304 aaPredicted RBP4.83□□□□□ -1.64
XPA-204ENST00000496104 B3GALT2O43825 422 aa4.83□□□□□ -1.64
XPA-204ENST00000496104 DFNA5O60443 496 aa4.83□□□□□ -1.64
XPA-204ENST00000496104 SDC3O75056 442 aa4.83□□□□□ -1.64
XPA-204ENST00000496104 TBCAO75347 108 aaKnown RBP4.83□□□□□ -1.64
XPA-204ENST00000496104 VPS4BO75351 444 aa4.83□□□□□ -1.64
XPA-204ENST00000496104 SORBS2O94875 1100 aaKnown RBP4.83□□□□□ -1.64
XPA-204ENST00000496104 IGHDP01880 384 aa4.83□□□□□ -1.64
XPA-204ENST00000496104 ITGB3P05106 788 aa4.83□□□□□ -1.64
XPA-204ENST00000496104 CKMP06732 381 aa4.83□□□□□ -1.64
XPA-204ENST00000496104 HAPLN1P10915 354 aaPredicted RBP4.83□□□□□ -1.64
XPA-204ENST00000496104 LIPCP11150 499 aa4.83□□□□□ -1.64
XPA-204ENST00000496104 CKMT1AP12532 417 aa4.83□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms