RNA–Protein interactions for RNA: ENST00000496024.1

CALD1-223, Transcript of caldesmon 1, humanhuman

TSL 4

Gene CALD1, Length 557 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-223ENST00000496024 PSKH2Q96QS6 385 aa9.94□□□□□ -0.82
CALD1-223ENST00000496024 LGMNQ99538 433 aa9.94□□□□□ -0.82
CALD1-223ENST00000496024 GTPBP2Q9BX10 602 aaKnown RBP9.94□□□□□ -0.82
CALD1-223ENST00000496024 OSBPL1AQ9BXW6 950 aa9.94□□□□□ -0.82
CALD1-223ENST00000496024 CEP41Q9BYV8 373 aa9.94□□□□□ -0.82
CALD1-223ENST00000496024 TSGA10Q9BZW7 698 aa9.94□□□□□ -0.82
CALD1-223ENST00000496024 SUV39H2Q9H5I1 410 aa9.94□□□□□ -0.82
CALD1-223ENST00000496024 ATP13A3Q9H7F0 1226 aa9.94□□□□□ -0.82
CALD1-223ENST00000496024 EBF2Q9HAK2 575 aa9.94□□□□□ -0.82
CALD1-223ENST00000496024 SCUBE2Q9NQ36 999 aa9.94□□□□□ -0.82
CALD1-223ENST00000496024 LZTFL1Q9NQ48 299 aa9.94□□□□□ -0.82
CALD1-223ENST00000496024 RBM22Q9NW64 420 aaKnown RBP eCLIP9.94□□□□□ -0.82
CALD1-223ENST00000496024 SEPT10Q9P0V9 454 aa9.94□□□□□ -0.82
CALD1-223ENST00000496024 SUSD2Q9UGT4 822 aa9.94□□□□□ -0.82
CALD1-223ENST00000496024 GGT7Q9UJ14 662 aa9.94□□□□□ -0.82
CALD1-223ENST00000496024 ITM2BQ9Y287 266 aa9.94□□□□□ -0.82
CALD1-223ENST00000496024 PCDHA3Q9Y5H8 950 aa9.94□□□□□ -0.82
CALD1-223ENST00000496024 CAPN6Q9Y6Q1 641 aa9.94□□□□□ -0.82
CALD1-223ENST00000496024 CNOT1A5YKK6 2376 aaKnown RBP9.94□□□□□ -0.82
CALD1-223ENST00000496024 ASCC3Q8N3C0 2202 aaKnown RBP9.94□□□□□ -0.82
CALD1-223ENST00000496024 hCG_1818297A0A087WSY0 165 aa9.93□□□□□ -0.82
CALD1-223ENST00000496024 A0A1B0GTW7 788 aa9.93□□□□□ -0.82
CALD1-223ENST00000496024 LNP1A1A4G5 178 aa9.93□□□□□ -0.82
CALD1-223ENST00000496024 CCDC66A2RUB6 948 aa9.93□□□□□ -0.82
CALD1-223ENST00000496024 KCNK1O00180 336 aa9.93□□□□□ -0.82
CALD1-223ENST00000496024 WNT9AO14904 365 aa9.93□□□□□ -0.82
CALD1-223ENST00000496024 MATN3O15232 486 aa9.93□□□□□ -0.82
CALD1-223ENST00000496024 JCHAINP01591 159 aa9.93□□□□□ -0.82
CALD1-223ENST00000496024 SERPINF2P08697 491 aa9.93□□□□□ -0.82
CALD1-223ENST00000496024 CCNB1P14635 433 aa9.93□□□□□ -0.82
CALD1-223ENST00000496024 TIMP2P16035 220 aa9.93□□□□□ -0.82
CALD1-223ENST00000496024 PECAM1P16284 738 aaPredicted RBP9.93□□□□□ -0.82
CALD1-223ENST00000496024 PRLRP16471 622 aa9.93□□□□□ -0.82
CALD1-223ENST00000496024 CCNCP24863 283 aa9.93□□□□□ -0.82
CALD1-223ENST00000496024 CTNNA2P26232 953 aa9.93□□□□□ -0.82
CALD1-223ENST00000496024 CD27P26842 260 aa9.93□□□□□ -0.82
CALD1-223ENST00000496024 SERPINA4P29622 427 aa9.93□□□□□ -0.82
CALD1-223ENST00000496024 HOXD12P35452 270 aa9.93□□□□□ -0.82
CALD1-223ENST00000496024 DPP6P42658 865 aa9.93□□□□□ -0.82
CALD1-223ENST00000496024 PEX5P50542 639 aa9.93□□□□□ -0.82
CALD1-223ENST00000496024 CCR5P51681 352 aa9.93□□□□□ -0.82
CALD1-223ENST00000496024 RWDD2BP57060 319 aa9.93□□□□□ -0.82
CALD1-223ENST00000496024 SEMG2Q02383 582 aa9.93□□□□□ -0.82
CALD1-223ENST00000496024 LMNB2Q03252 620 aa9.93□□□□□ -0.82
CALD1-223ENST00000496024 BCL2L1Q07817 233 aa9.93□□□□□ -0.82
CALD1-223ENST00000496024 NSUN2Q08J23 767 aaKnown RBP eCLIP9.93□□□□□ -0.82
CALD1-223ENST00000496024 ZNF211Q13398 564 aaPredicted RBP9.93□□□□□ -0.82
CALD1-223ENST00000496024 GRM3Q14832 879 aa9.93□□□□□ -0.82
CALD1-223ENST00000496024 PDK1Q15118 436 aa9.93□□□□□ -0.82
CALD1-223ENST00000496024 TAZQ16635 292 aa9.93□□□□□ -0.82
CALD1-223ENST00000496024 TFDP3Q5H9I0 405 aa9.93□□□□□ -0.82
CALD1-223ENST00000496024 CCDC181Q5TID7 509 aa9.93□□□□□ -0.82
CALD1-223ENST00000496024 PEAR1Q5VY43 1037 aaPredicted RBP9.93□□□□□ -0.82
CALD1-223ENST00000496024 SEL1L3Q68CR1 1132 aa9.93□□□□□ -0.82
CALD1-223ENST00000496024 TIGD7Q6NT04 549 aaPredicted RBP9.93□□□□□ -0.82
CALD1-223ENST00000496024 AADACL2Q6P093 401 aa9.93□□□□□ -0.82
CALD1-223ENST00000496024 SLC23A3Q6PIS1 610 aa9.93□□□□□ -0.82
CALD1-223ENST00000496024 ADAT2Q7Z6V5 191 aaKnown RBP9.93□□□□□ -0.82
CALD1-223ENST00000496024 PRPF39Q86UA1 669 aaKnown RBP9.93□□□□□ -0.82
CALD1-223ENST00000496024 VSIG1Q86XK7 387 aa9.93□□□□□ -0.82
CALD1-223ENST00000496024 CCDC13Q8IYE1 715 aa9.93□□□□□ -0.82
CALD1-223ENST00000496024 SYCE1Q8N0S2 351 aa9.93□□□□□ -0.82
CALD1-223ENST00000496024 RNF10Q8N5U6 811 aaKnown RBP9.93□□□□□ -0.82
CALD1-223ENST00000496024 OR2I1PQ8NGU4 316 aa9.93□□□□□ -0.82
CALD1-223ENST00000496024 ALG3Q92685 438 aa9.93□□□□□ -0.82
CALD1-223ENST00000496024 FAM131CQ96AQ9 280 aa9.93□□□□□ -0.82
CALD1-223ENST00000496024 HDAC11Q96DB2 347 aa9.93□□□□□ -0.82
CALD1-223ENST00000496024 SERAC1Q96JX3 654 aa9.93□□□□□ -0.82
CALD1-223ENST00000496024 SLC6A18Q96N87 628 aa9.93□□□□□ -0.82
CALD1-223ENST00000496024 TSGA13Q96PP4 275 aa9.93□□□□□ -0.82
CALD1-223ENST00000496024 SEMA3CQ99985 751 aa9.93□□□□□ -0.82
CALD1-223ENST00000496024 WRAP53Q9BUR4 548 aaKnown RBP9.93□□□□□ -0.82
CALD1-223ENST00000496024 EDEM2Q9BV94 578 aa9.93□□□□□ -0.82
CALD1-223ENST00000496024 CPEB1Q9BZB8 566 aaKnown RBP9.93□□□□□ -0.82
CALD1-223ENST00000496024 KDM4CQ9H3R0 1056 aa9.93□□□□□ -0.82
CALD1-223ENST00000496024 NOD2Q9HC29 1040 aa9.93□□□□□ -0.82
CALD1-223ENST00000496024 PREBQ9HCU5 417 aa9.93□□□□□ -0.82
CALD1-223ENST00000496024 TM9SF3Q9HD45 589 aa9.93□□□□□ -0.82
CALD1-223ENST00000496024 AASDHPPTQ9NRN7 309 aa9.93□□□□□ -0.82
CALD1-223ENST00000496024 SLC6A14Q9UN76 642 aa9.93□□□□□ -0.82
CALD1-223ENST00000496024 ZFR2Q9UPR6 939 aaKnown RBP9.93□□□□□ -0.82
CALD1-223ENST00000496024 PCDHGC4Q9Y5F7 938 aa9.93□□□□□ -0.82
CALD1-223ENST00000496024 FADS3Q9Y5Q0 445 aa9.93□□□□□ -0.82
CALD1-223ENST00000496024 SPTBN2O15020 2390 aa9.93□□□□□ -0.82
CALD1-223ENST00000496024 A0A1B0GVT2 93 aa9.92□□□□□ -0.82
CALD1-223ENST00000496024 A0A1W2PPC4 97 aa9.92□□□□□ -0.82
CALD1-223ENST00000496024 PPP1R12AO14974 1030 aaPredicted RBP9.92□□□□□ -0.82
CALD1-223ENST00000496024 HLA-DQB2P05538 268 aa9.92□□□□□ -0.82
CALD1-223ENST00000496024 PYGMP11217 842 aa9.92□□□□□ -0.82
CALD1-223ENST00000496024 ENGP17813 658 aa9.92□□□□□ -0.82
CALD1-223ENST00000496024 TGM2P21980 687 aa9.92□□□□□ -0.82
CALD1-223ENST00000496024 HSPA9P38646 679 aaKnown RBP9.92□□□□□ -0.82
CALD1-223ENST00000496024 CETN2P41208 172 aa9.92□□□□□ -0.82
CALD1-223ENST00000496024 CSNK1DP48730 415 aa9.92□□□□□ -0.82
CALD1-223ENST00000496024 ATXN3P54252 364 aaPredicted RBP9.92□□□□□ -0.82
CALD1-223ENST00000496024 AP1S1P61966 158 aa9.92□□□□□ -0.82
CALD1-223ENST00000496024 DSC2Q02487 901 aa9.92□□□□□ -0.82
CALD1-223ENST00000496024 PPIDQ08752 370 aaKnown RBP9.92□□□□□ -0.82
CALD1-223ENST00000496024 ZBTB17Q13105 803 aa9.92□□□□□ -0.82
CALD1-223ENST00000496024 HNRNPDQ14103 355 aaKnown RBP9.92□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms