RNA–Protein interactions for RNA: ENST00000495515.1

HDAC6-235, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 569 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-235ENST00000495515 GOLGA6L10A0A0M3HER8 536 aa17.28■□□□□ 0.36
HDAC6-235ENST00000495515 C16orf96A6NNT2 1141 aa17.28■□□□□ 0.36
HDAC6-235ENST00000495515 LIASO43766 372 aa17.28■□□□□ 0.36
HDAC6-235ENST00000495515 PIGNO95427 931 aa17.28■□□□□ 0.36
HDAC6-235ENST00000495515 TUBB4AP04350 444 aa17.28■□□□□ 0.36
HDAC6-235ENST00000495515 STIP1P31948 543 aaKnown RBP17.28■□□□□ 0.36
HDAC6-235ENST00000495515 DSC2Q02487 901 aa17.28■□□□□ 0.36
HDAC6-235ENST00000495515 RPL6Q02878 288 aaKnown RBP17.28■□□□□ 0.36
HDAC6-235ENST00000495515 LPCAT2Q7L5N7 544 aa17.28■□□□□ 0.36
HDAC6-235ENST00000495515 FAM160A2Q8N612 972 aaPredicted RBP17.28■□□□□ 0.36
HDAC6-235ENST00000495515 OR14C36Q8NHC7 312 aa17.28■□□□□ 0.36
HDAC6-235ENST00000495515 C1orf54Q8WWF1 131 aa17.28■□□□□ 0.36
HDAC6-235ENST00000495515 FOXJ1Q92949 421 aa17.28■□□□□ 0.36
HDAC6-235ENST00000495515 NKD2Q969F2 451 aaPredicted RBP17.28■□□□□ 0.36
HDAC6-235ENST00000495515 FAM131CQ96AQ9 280 aa17.28■□□□□ 0.36
HDAC6-235ENST00000495515 ZNF419Q96HQ0 510 aaPredicted RBP17.28■□□□□ 0.36
HDAC6-235ENST00000495515 CEP41Q9BYV8 373 aa17.28■□□□□ 0.36
HDAC6-235ENST00000495515 SLC25A51Q9H1U9 297 aa17.28■□□□□ 0.36
HDAC6-235ENST00000495515 GLOD4Q9HC38 313 aa17.28■□□□□ 0.36
HDAC6-235ENST00000495515 DNPEPQ9ULA0 475 aa17.28■□□□□ 0.36
HDAC6-235ENST00000495515 TPX2Q9ULW0 747 aaKnown RBP17.28■□□□□ 0.36
HDAC6-235ENST00000495515 ZNF148Q9UQR1 794 aa17.28■□□□□ 0.36
HDAC6-235ENST00000495515 OPHN1O60890 802 aa17.27■□□□□ 0.36
HDAC6-235ENST00000495515 SEMA4FO95754 770 aa17.27■□□□□ 0.36
HDAC6-235ENST00000495515 ADRB3P13945 408 aa17.27■□□□□ 0.36
HDAC6-235ENST00000495515 METAP1P53582 386 aa17.27■□□□□ 0.36
HDAC6-235ENST00000495515 SRSF5Q13243 272 aaKnown RBP17.27■□□□□ 0.36
HDAC6-235ENST00000495515 PIP5KL1Q5T9C9 394 aa17.27■□□□□ 0.36
HDAC6-235ENST00000495515 AGBL4Q5VU57 503 aa17.27■□□□□ 0.36
HDAC6-235ENST00000495515 DRICH1Q6PGQ1 229 aaPredicted RBP17.27■□□□□ 0.36
HDAC6-235ENST00000495515 PRR23BQ6ZRT6 265 aa17.27■□□□□ 0.36
HDAC6-235ENST00000495515 PARS2Q7L3T8 475 aaKnown RBP17.27■□□□□ 0.36
HDAC6-235ENST00000495515 TTC7BQ86TV6 843 aa17.27■□□□□ 0.36
HDAC6-235ENST00000495515 NDUFAF2Q8N183 169 aa17.27■□□□□ 0.36
HDAC6-235ENST00000495515 ZNF567Q8N184 647 aa17.27■□□□□ 0.36
HDAC6-235ENST00000495515 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP17.27■□□□□ 0.36
HDAC6-235ENST00000495515 CADM4Q8NFZ8 388 aa17.27■□□□□ 0.36
HDAC6-235ENST00000495515 OR2T34Q8NGX1 318 aa17.27■□□□□ 0.36
HDAC6-235ENST00000495515 ARRDC2Q8TBH0 407 aa17.27■□□□□ 0.36
HDAC6-235ENST00000495515 COG1Q8WTW3 980 aa17.27■□□□□ 0.36
HDAC6-235ENST00000495515 ATG4AQ8WYN0 398 aa17.27■□□□□ 0.36
HDAC6-235ENST00000495515 ZC3H10Q96K80 434 aaKnown RBP17.27■□□□□ 0.36
HDAC6-235ENST00000495515 PPP1R2P1Q96PQ5 205 aa17.27■□□□□ 0.36
HDAC6-235ENST00000495515 GPR174Q9BXC1 333 aa17.27■□□□□ 0.36
HDAC6-235ENST00000495515 EPC1Q9H2F5 836 aa17.27■□□□□ 0.36
HDAC6-235ENST00000495515 CD93Q9NPY3 652 aa17.27■□□□□ 0.36
HDAC6-235ENST00000495515 RNF14Q9UBS8 474 aa17.27■□□□□ 0.36
HDAC6-235ENST00000495515 SERGEFQ9UGK8 458 aa17.27■□□□□ 0.36
HDAC6-235ENST00000495515 MBD1Q9UIS9 605 aaPredicted RBP17.27■□□□□ 0.36
HDAC6-235ENST00000495515 RAI2Q9Y5P3 530 aa17.27■□□□□ 0.36
HDAC6-235ENST00000495515 TSPAN11A1L157 253 aa17.26■□□□□ 0.35
HDAC6-235ENST00000495515 TTC24A2A3L6 582 aaPredicted RBP17.26■□□□□ 0.35
HDAC6-235ENST00000495515 C5orf60A6NFR6 353 aa17.26■□□□□ 0.35
HDAC6-235ENST00000495515 KIF2AO00139 706 aaPredicted RBP17.26■□□□□ 0.35
HDAC6-235ENST00000495515 NEMP1O14524 444 aa17.26■□□□□ 0.35
HDAC6-235ENST00000495515 HTRA2O43464 458 aaPredicted RBP17.26■□□□□ 0.35
HDAC6-235ENST00000495515 PLRG1O43660 514 aaKnown RBP17.26■□□□□ 0.35
HDAC6-235ENST00000495515 GJB3O75712 270 aa17.26■□□□□ 0.35
HDAC6-235ENST00000495515 BCKDHBP21953 392 aa17.26■□□□□ 0.35
HDAC6-235ENST00000495515 ACSL1P33121 698 aa17.26■□□□□ 0.35
HDAC6-235ENST00000495515 ACTN2P35609 894 aa17.26■□□□□ 0.35
HDAC6-235ENST00000495515 NBL1P41271 181 aa17.26■□□□□ 0.35
HDAC6-235ENST00000495515 CD86P42081 329 aa17.26■□□□□ 0.35
HDAC6-235ENST00000495515 TNNT3P45378 269 aaPredicted RBP17.26■□□□□ 0.35
HDAC6-235ENST00000495515 ADPRHP54922 357 aa17.26■□□□□ 0.35
HDAC6-235ENST00000495515 SIX1Q15475 284 aaPredicted RBP17.26■□□□□ 0.35
HDAC6-235ENST00000495515 SLC14A2Q15849 920 aa17.26■□□□□ 0.35
HDAC6-235ENST00000495515 PLK5Q496M5 336 aa17.26■□□□□ 0.35
HDAC6-235ENST00000495515 ARMC12Q5T9G4 340 aa17.26■□□□□ 0.35
HDAC6-235ENST00000495515 ERAP2Q6P179 960 aa17.26■□□□□ 0.35
HDAC6-235ENST00000495515 SYT10Q6XYQ8 523 aa17.26■□□□□ 0.35
HDAC6-235ENST00000495515 NYAP1Q6ZVC0 841 aa17.26■□□□□ 0.35
HDAC6-235ENST00000495515 FRMD1Q8N878 549 aa17.26■□□□□ 0.35
HDAC6-235ENST00000495515 FAM71DQ8N9W8 422 aa17.26■□□□□ 0.35
HDAC6-235ENST00000495515 PDCD6IPQ8WUM4 868 aaKnown RBP17.26■□□□□ 0.35
HDAC6-235ENST00000495515 ECHDC3Q96DC8 303 aa17.26■□□□□ 0.35
HDAC6-235ENST00000495515 IMP4Q96G21 291 aaKnown RBP17.26■□□□□ 0.35
HDAC6-235ENST00000495515 MS4A14Q96JA4 679 aa17.26■□□□□ 0.35
HDAC6-235ENST00000495515 SPATA13Q96N96 652 aa17.26■□□□□ 0.35
HDAC6-235ENST00000495515 TMEM121Q9BTD3 319 aa17.26■□□□□ 0.35
HDAC6-235ENST00000495515 DUSP15Q9H1R2 295 aaPredicted RBP17.26■□□□□ 0.35
HDAC6-235ENST00000495515 C10orf88Q9H8K7 445 aa17.26■□□□□ 0.35
HDAC6-235ENST00000495515 USP29Q9HBJ7 922 aa17.26■□□□□ 0.35
HDAC6-235ENST00000495515 PREBQ9HCU5 417 aa17.26■□□□□ 0.35
HDAC6-235ENST00000495515 EIF2AK3Q9NZJ5 1116 aaKnown RBP17.26■□□□□ 0.35
HDAC6-235ENST00000495515 RSPH14Q9UHP6 348 aa17.26■□□□□ 0.35
HDAC6-235ENST00000495515 DRG1Q9Y295 367 aaKnown RBP17.26■□□□□ 0.35
HDAC6-235ENST00000495515 PCDHGC4Q9Y5F7 938 aa17.26■□□□□ 0.35
HDAC6-235ENST00000495515 WDFY4Q6ZS81 3184 aa17.26■□□□□ 0.35
HDAC6-235ENST00000495515 CACNA1HO95180 2353 aa17.25■□□□□ 0.35
HDAC6-235ENST00000495515 TBC1D3DA0A087WVF3 549 aa17.25■□□□□ 0.35
HDAC6-235ENST00000495515 TBC1D3IA0A087WXS9 549 aa17.25■□□□□ 0.35
HDAC6-235ENST00000495515 TBC1D3EA0A087X179 549 aa17.25■□□□□ 0.35
HDAC6-235ENST00000495515 TBC1D3KA0A087X1G2 549 aa17.25■□□□□ 0.35
HDAC6-235ENST00000495515 TBC1D3FA6NER0 549 aaPredicted RBP17.25■□□□□ 0.35
HDAC6-235ENST00000495515 FAM47DPA6NHR8 397 aa17.25■□□□□ 0.35
HDAC6-235ENST00000495515 UPK3BL1B0FP48 263 aa17.25■□□□□ 0.35
HDAC6-235ENST00000495515 TBC1D3LB9A6J9 549 aa17.25■□□□□ 0.35
HDAC6-235ENST00000495515 UPK3BL2E5RIL1 263 aa17.25■□□□□ 0.35
HDAC6-235ENST00000495515 PLK4O00444 970 aa17.25■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms