RNA–Protein interactions for RNA: ENST00000495071.6

SUPT20H-222, Transcript of SPT20 homolog, SAGA complex component, humanhuman

TSL 5

Gene SUPT20H, Length 3,669 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT20H-222ENST00000495071 TSPAN14Q8NG11 270 aa13.55□□□□□ -0.24
SUPT20H-222ENST00000495071 UPF3AQ9H1J1 476 aaKnown RBP13.55□□□□□ -0.24
SUPT20H-222ENST00000495071 TSPYL2Q9H2G4 693 aaPredicted RBP13.55□□□□□ -0.24
SUPT20H-222ENST00000495071 CAMSAP3Q9P1Y5 1249 aaPredicted RBP13.55□□□□□ -0.24
SUPT20H-222ENST00000495071 C9IYK1 514 aa13.55□□□□□ -0.24
SUPT20H-222ENST00000495071 NPHS1O60500 1241 aa13.55□□□□□ -0.24
SUPT20H-222ENST00000495071 PFDN1O60925 122 aa13.55□□□□□ -0.24
SUPT20H-222ENST00000495071 CHRNA4P43681 627 aa13.55□□□□□ -0.24
SUPT20H-222ENST00000495071 GEMP55040 296 aa13.55□□□□□ -0.24
SUPT20H-222ENST00000495071 NME5P56597 212 aa13.55□□□□□ -0.24
SUPT20H-222ENST00000495071 GJA9P57773 515 aa13.55□□□□□ -0.24
SUPT20H-222ENST00000495071 RFTN1Q14699 578 aaPredicted RBP13.55□□□□□ -0.24
SUPT20H-222ENST00000495071 MGAT5BQ3V5L5 792 aa13.55□□□□□ -0.24
SUPT20H-222ENST00000495071 TAC4Q86UU9 113 aa13.55□□□□□ -0.24
SUPT20H-222ENST00000495071 OR6P1Q8NGX9 317 aa13.55□□□□□ -0.24
SUPT20H-222ENST00000495071 EMID1Q96A84 441 aaPredicted RBP13.55□□□□□ -0.24
SUPT20H-222ENST00000495071 PBXIP1Q96AQ6 731 aa13.55□□□□□ -0.24
SUPT20H-222ENST00000495071 CIB1Q99828 191 aa13.55□□□□□ -0.24
SUPT20H-222ENST00000495071 ZNF696Q9H7X3 374 aa13.55□□□□□ -0.24
SUPT20H-222ENST00000495071 GLOD4Q9HC38 313 aa13.55□□□□□ -0.24
SUPT20H-222ENST00000495071 IRAK4Q9NWZ3 460 aa13.55□□□□□ -0.24
SUPT20H-222ENST00000495071 PCNTO95613 3336 aa13.55□□□□□ -0.24
SUPT20H-222ENST00000495071 ACOT8O14734 319 aa13.55□□□□□ -0.24
SUPT20H-222ENST00000495071 SRP72O76094 671 aaKnown RBP13.55□□□□□ -0.24
SUPT20H-222ENST00000495071 SUPT7LO94864 414 aa13.55□□□□□ -0.24
SUPT20H-222ENST00000495071 CCDC166P0CW27 439 aa13.55□□□□□ -0.24
SUPT20H-222ENST00000495071 PPP1R3AQ16821 1122 aa13.55□□□□□ -0.24
SUPT20H-222ENST00000495071 REP15Q6BDI9 236 aa13.55□□□□□ -0.24
SUPT20H-222ENST00000495071 HERC6Q8IVU3 1022 aa13.55□□□□□ -0.24
SUPT20H-222ENST00000495071 UNC93B1Q9H1C4 597 aa13.55□□□□□ -0.24
SUPT20H-222ENST00000495071 SPAG4Q9NPE6 437 aa13.55□□□□□ -0.24
SUPT20H-222ENST00000495071 A0A087X1B8 175 aa13.54□□□□□ -0.24
SUPT20H-222ENST00000495071 USP46P62068 366 aa13.54□□□□□ -0.24
SUPT20H-222ENST00000495071 RBM20Q5T481 1227 aaKnown RBP13.54□□□□□ -0.24
SUPT20H-222ENST00000495071 DCLRE1AQ6PJP8 1040 aa13.54□□□□□ -0.24
SUPT20H-222ENST00000495071 BNIPLQ7Z465 357 aa13.54□□□□□ -0.24
SUPT20H-222ENST00000495071 CUZD1Q86UP6 607 aa13.54□□□□□ -0.24
SUPT20H-222ENST00000495071 FAR2Q96K12 515 aa13.54□□□□□ -0.24
SUPT20H-222ENST00000495071 ZNF385DQ9H6B1 395 aa13.54□□□□□ -0.24
SUPT20H-222ENST00000495071 RRN3Q9NYV6 651 aa13.54□□□□□ -0.24
SUPT20H-222ENST00000495071 PLK2Q9NYY3 685 aa13.54□□□□□ -0.24
SUPT20H-222ENST00000495071 AURKCQ9UQB9 309 aa13.54□□□□□ -0.24
SUPT20H-222ENST00000495071 TCAF1Q9Y4C2 921 aa13.54□□□□□ -0.24
SUPT20H-222ENST00000495071 TLL2Q9Y6L7 1015 aa13.54□□□□□ -0.24
SUPT20H-222ENST00000495071 SMIM35A0A1B0GVV1 85 aa13.54□□□□□ -0.24
SUPT20H-222ENST00000495071 H3BSA7 217 aa13.54□□□□□ -0.24
SUPT20H-222ENST00000495071 AURKAO14965 403 aa13.54□□□□□ -0.24
SUPT20H-222ENST00000495071 SNRPB2P08579 225 aaKnown RBP13.54□□□□□ -0.24
SUPT20H-222ENST00000495071 HSPA8P11142 646 aaKnown RBP13.54□□□□□ -0.24
SUPT20H-222ENST00000495071 LHX1P48742 406 aa13.54□□□□□ -0.24
SUPT20H-222ENST00000495071 SULT2A1Q06520 285 aa13.54□□□□□ -0.24
SUPT20H-222ENST00000495071 SQLEQ14534 574 aa13.54□□□□□ -0.24
SUPT20H-222ENST00000495071 PAN2Q504Q3 1202 aaKnown RBP13.54□□□□□ -0.24
SUPT20H-222ENST00000495071 MTX3Q5HYI7 312 aa13.54□□□□□ -0.24
SUPT20H-222ENST00000495071 TSTD2Q5T7W7 516 aa13.54□□□□□ -0.24
SUPT20H-222ENST00000495071 ZBTB49Q6ZSB9 765 aa13.54□□□□□ -0.24
SUPT20H-222ENST00000495071 MFSD6LQ8IWD5 586 aa13.54□□□□□ -0.24
SUPT20H-222ENST00000495071 PNPLA1Q8N8W4 532 aa13.54□□□□□ -0.24
SUPT20H-222ENST00000495071 GABPB2Q8TAK5 448 aaPredicted RBP13.54□□□□□ -0.24
SUPT20H-222ENST00000495071 NOL11Q9H8H0 719 aaKnown RBP13.54□□□□□ -0.24
SUPT20H-222ENST00000495071 ZNF408Q9H9D4 720 aa13.54□□□□□ -0.24
SUPT20H-222ENST00000495071 CROTQ9UKG9 612 aa13.54□□□□□ -0.24
SUPT20H-222ENST00000495071 ZNF839A8K0R7 811 aa13.54□□□□□ -0.24
SUPT20H-222ENST00000495071 PITRM1Q5JRX3 1037 aa13.54□□□□□ -0.24
SUPT20H-222ENST00000495071 POTEHQ6S545 545 aa13.54□□□□□ -0.24
SUPT20H-222ENST00000495071 TMEM102Q8N9M5 508 aaPredicted RBP13.54□□□□□ -0.24
SUPT20H-222ENST00000495071 OR9I1Q8NGQ6 314 aa13.54□□□□□ -0.24
SUPT20H-222ENST00000495071 SLC39A3Q9BRY0 314 aa13.54□□□□□ -0.24
SUPT20H-222ENST00000495071 CACNA2D2Q9NY47 1150 aa13.54□□□□□ -0.24
SUPT20H-222ENST00000495071 TMCO1Q9UM00 188 aa13.54□□□□□ -0.24
SUPT20H-222ENST00000495071 PCDHGA7Q9Y5G6 932 aa13.54□□□□□ -0.24
SUPT20H-222ENST00000495071 WDR90Q96KV7 1748 aa13.54□□□□□ -0.24
SUPT20H-222ENST00000495071 SHROOM3Q8TF72 1996 aa13.54□□□□□ -0.24
SUPT20H-222ENST00000495071 LOC285556D6RIA3 1793 aa13.53□□□□□ -0.24
SUPT20H-222ENST00000495071 TREHO43280 583 aa13.53□□□□□ -0.24
SUPT20H-222ENST00000495071 IPO13O94829 963 aaKnown RBP13.53□□□□□ -0.24
SUPT20H-222ENST00000495071 LRPAP1P30533 357 aa13.53□□□□□ -0.24
SUPT20H-222ENST00000495071 CXCR3P49682 368 aa13.53□□□□□ -0.24
SUPT20H-222ENST00000495071 POU4F1Q01851 419 aa13.53□□□□□ -0.24
SUPT20H-222ENST00000495071 PCBP1Q15365 356 aaKnown RBP eCLIP13.53□□□□□ -0.24
SUPT20H-222ENST00000495071 NOMO2Q5JPE7 1267 aa13.53□□□□□ -0.24
SUPT20H-222ENST00000495071 PRAMEF19Q5SWL8 479 aa13.53□□□□□ -0.24
SUPT20H-222ENST00000495071 CLEC6AQ6EIG7 209 aa13.53□□□□□ -0.24
SUPT20H-222ENST00000495071 ZMIZ2Q8NF64 920 aa13.53□□□□□ -0.24
SUPT20H-222ENST00000495071 SPPL2BQ8TCT7 592 aa13.53□□□□□ -0.24
SUPT20H-222ENST00000495071 CCDC126Q96EE4 140 aa13.53□□□□□ -0.24
SUPT20H-222ENST00000495071 SLC10A4Q96EP9 437 aa13.53□□□□□ -0.24
SUPT20H-222ENST00000495071 SMARCD1Q96GM5 515 aa13.53□□□□□ -0.24
SUPT20H-222ENST00000495071 UTP6Q9NYH9 597 aaKnown RBP13.53□□□□□ -0.24
SUPT20H-222ENST00000495071 A0A1B0GTW7 788 aa13.53□□□□□ -0.24
SUPT20H-222ENST00000495071 TARM1B6A8C7 271 aa13.53□□□□□ -0.24
SUPT20H-222ENST00000495071 TPST1O60507 370 aa13.53□□□□□ -0.24
SUPT20H-222ENST00000495071 TIPRLO75663 272 aa13.53□□□□□ -0.24
SUPT20H-222ENST00000495071 SLC4A1P02730 911 aa13.53□□□□□ -0.24
SUPT20H-222ENST00000495071 BDNFP23560 247 aa13.53□□□□□ -0.24
SUPT20H-222ENST00000495071 SLC7A2P52569 658 aa13.53□□□□□ -0.24
SUPT20H-222ENST00000495071 ADRM1Q16186 407 aa13.53□□□□□ -0.24
SUPT20H-222ENST00000495071 DIS3LQ8TF46 1054 aaKnown RBP13.53□□□□□ -0.24
SUPT20H-222ENST00000495071 GPR78Q96P69 363 aa13.53□□□□□ -0.24
SUPT20H-222ENST00000495071 GAD1Q99259 594 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms