RNA–Protein interactions for RNA: ENST00000494800.1

HDAC4-211, Transcript of histone deacetylase 4, humanhuman

TSL 5

Gene HDAC4, Length 451 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-211ENST00000494800 SUV39H2Q9H5I1 410 aa17.85■□□□□ 0.45
HDAC4-211ENST00000494800 HAUS2Q9NVX0 235 aa17.85■□□□□ 0.45
HDAC4-211ENST00000494800 PCOLCE2Q9UKZ9 415 aa17.85■□□□□ 0.45
HDAC4-211ENST00000494800 ZFR2Q9UPR6 939 aaKnown RBP17.85■□□□□ 0.45
HDAC4-211ENST00000494800 CACNA1EQ15878 2313 aa17.84■□□□□ 0.45
HDAC4-211ENST00000494800 SPAARA0A1B0GVQ0 90 aa17.84■□□□□ 0.45
HDAC4-211ENST00000494800 A6NNZ2 444 aa17.84■□□□□ 0.45
HDAC4-211ENST00000494800 TRIM16O95361 564 aa17.84■□□□□ 0.45
HDAC4-211ENST00000494800 ITGAVP06756 1048 aa17.84■□□□□ 0.45
HDAC4-211ENST00000494800 THEGLP0DJG4 465 aa17.84■□□□□ 0.45
HDAC4-211ENST00000494800 ABL2P42684 1182 aa17.84■□□□□ 0.45
HDAC4-211ENST00000494800 ZNF75DP51815 510 aa17.84■□□□□ 0.45
HDAC4-211ENST00000494800 AP1S1P61966 158 aa17.84■□□□□ 0.45
HDAC4-211ENST00000494800 BCL2L1Q07817 233 aa17.84■□□□□ 0.45
HDAC4-211ENST00000494800 DPYSL3Q14195 570 aa17.84■□□□□ 0.45
HDAC4-211ENST00000494800 SPA17Q15506 151 aa17.84■□□□□ 0.45
HDAC4-211ENST00000494800 DBX2Q6ZNG2 339 aa17.84■□□□□ 0.45
HDAC4-211ENST00000494800 ARHGAP36Q6ZRI8 547 aa17.84■□□□□ 0.45
HDAC4-211ENST00000494800 DCP2Q8IU60 420 aaKnown RBP17.84■□□□□ 0.45
HDAC4-211ENST00000494800 CCDC170Q8IYT3 715 aa17.84■□□□□ 0.45
HDAC4-211ENST00000494800 TC2NQ8N9U0 490 aa17.84■□□□□ 0.45
HDAC4-211ENST00000494800 CAMK1GQ96NX5 476 aa17.84■□□□□ 0.45
HDAC4-211ENST00000494800 PSKH2Q96QS6 385 aa17.84■□□□□ 0.45
HDAC4-211ENST00000494800 ETNK2Q9NVF9 386 aa17.84■□□□□ 0.45
HDAC4-211ENST00000494800 HS3ST3A1Q9Y663 406 aa17.84■□□□□ 0.45
HDAC4-211ENST00000494800 PLXNA2O75051 1894 aa17.84■□□□□ 0.45
HDAC4-211ENST00000494800 FPGTO14772 594 aa17.83■□□□□ 0.44
HDAC4-211ENST00000494800 INSIG1O15503 277 aa17.83■□□□□ 0.44
HDAC4-211ENST00000494800 MTA2O94776 668 aa17.83■□□□□ 0.44
HDAC4-211ENST00000494800 IPO7O95373 1038 aaKnown RBP17.83■□□□□ 0.44
HDAC4-211ENST00000494800 PIGNO95427 931 aa17.83■□□□□ 0.44
HDAC4-211ENST00000494800 PAK4O96013 591 aaPredicted RBP17.83■□□□□ 0.44
HDAC4-211ENST00000494800 PMLP29590 882 aa17.83■□□□□ 0.44
HDAC4-211ENST00000494800 CYLC1P35663 651 aaPredicted RBP17.83■□□□□ 0.44
HDAC4-211ENST00000494800 SCNN1BP51168 640 aa17.83■□□□□ 0.44
HDAC4-211ENST00000494800 POLR2LP62875 67 aaKnown RBP17.83■□□□□ 0.44
HDAC4-211ENST00000494800 IL9RQ01113 521 aa17.83■□□□□ 0.44
HDAC4-211ENST00000494800 ANKRD20A8PQ5CZ79 823 aa17.83■□□□□ 0.44
HDAC4-211ENST00000494800 ASB12Q8WXK4 309 aa17.83■□□□□ 0.44
HDAC4-211ENST00000494800 LENG8Q96PV6 779 aaPredicted RBP17.83■□□□□ 0.44
HDAC4-211ENST00000494800 FZD3Q9NPG1 666 aa17.83■□□□□ 0.44
HDAC4-211ENST00000494800 APOBEC2Q9Y235 224 aaKnown RBP17.83■□□□□ 0.44
HDAC4-211ENST00000494800 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP17.82■□□□□ 0.44
HDAC4-211ENST00000494800 IGLON5A6NGN9 336 aa17.82■□□□□ 0.44
HDAC4-211ENST00000494800 AREL1O15033 823 aa17.82■□□□□ 0.44
HDAC4-211ENST00000494800 CD48P09326 243 aa17.82■□□□□ 0.44
HDAC4-211ENST00000494800 IL4RP24394 825 aa17.82■□□□□ 0.44
HDAC4-211ENST00000494800 NFKBIAP25963 317 aa17.82■□□□□ 0.44
HDAC4-211ENST00000494800 SLC1A1P43005 524 aa17.82■□□□□ 0.44
HDAC4-211ENST00000494800 MAGEA1P43355 309 aa17.82■□□□□ 0.44
HDAC4-211ENST00000494800 TAS2R40P59535 323 aa17.82■□□□□ 0.44
HDAC4-211ENST00000494800 SLC10A7Q0GE19 358 aa17.82■□□□□ 0.44
HDAC4-211ENST00000494800 FOXC1Q12948 553 aa17.82■□□□□ 0.44
HDAC4-211ENST00000494800 MMRN1Q13201 1228 aa17.82■□□□□ 0.44
HDAC4-211ENST00000494800 UGP2Q16851 508 aa17.82■□□□□ 0.44
HDAC4-211ENST00000494800 PRAMEF14Q5SWL7 426 aa17.82■□□□□ 0.44
HDAC4-211ENST00000494800 MARC1Q5VT66 337 aa17.82■□□□□ 0.44
HDAC4-211ENST00000494800 TIGD7Q6NT04 549 aaPredicted RBP17.82■□□□□ 0.44
HDAC4-211ENST00000494800 PTAR1Q7Z6K3 402 aaPredicted RBP17.82■□□□□ 0.44
HDAC4-211ENST00000494800 CAMK1DQ8IU85 385 aa17.82■□□□□ 0.44
HDAC4-211ENST00000494800 DENND6BQ8NEG7 585 aa17.82■□□□□ 0.44
HDAC4-211ENST00000494800 ZNF830Q96NB3 372 aaPredicted RBP17.82■□□□□ 0.44
HDAC4-211ENST00000494800 PANX2Q96RD6 677 aa17.82■□□□□ 0.44
HDAC4-211ENST00000494800 C1QTNF2Q9BXJ5 285 aa17.82■□□□□ 0.44
HDAC4-211ENST00000494800 KLHL11Q9NVR0 708 aa17.82■□□□□ 0.44
HDAC4-211ENST00000494800 ITM2BQ9Y287 266 aa17.82■□□□□ 0.44
HDAC4-211ENST00000494800 CA5BQ9Y2D0 317 aa17.82■□□□□ 0.44
HDAC4-211ENST00000494800 A0A1W2PQ67 120 aa17.81■□□□□ 0.44
HDAC4-211ENST00000494800 TSPAN11A1L157 253 aa17.81■□□□□ 0.44
HDAC4-211ENST00000494800 MAFKO60675 156 aa17.81■□□□□ 0.44
HDAC4-211ENST00000494800 CBFA2T3O75081 653 aa17.81■□□□□ 0.44
HDAC4-211ENST00000494800 NEBLO76041 1014 aa17.81■□□□□ 0.44
HDAC4-211ENST00000494800 TM7SF2O76062 418 aa17.81■□□□□ 0.44
HDAC4-211ENST00000494800 TIMP2P16035 220 aa17.81■□□□□ 0.44
HDAC4-211ENST00000494800 MX2P20592 715 aa17.81■□□□□ 0.44
HDAC4-211ENST00000494800 EPHA8P29322 1005 aaPredicted RBP17.81■□□□□ 0.44
HDAC4-211ENST00000494800 MMP13P45452 471 aa17.81■□□□□ 0.44
HDAC4-211ENST00000494800 NOP2P46087 812 aaKnown RBP17.81■□□□□ 0.44
HDAC4-211ENST00000494800 RABIFP47224 123 aa17.81■□□□□ 0.44
HDAC4-211ENST00000494800 RXRGP48443 463 aa17.81■□□□□ 0.44
HDAC4-211ENST00000494800 ARSEP51690 589 aa17.81■□□□□ 0.44
HDAC4-211ENST00000494800 SHC2P98077 582 aa17.81■□□□□ 0.44
HDAC4-211ENST00000494800 PAFAH1B3Q15102 231 aaKnown RBP17.81■□□□□ 0.44
HDAC4-211ENST00000494800 TCEAL1Q15170 157 aa17.81■□□□□ 0.44
HDAC4-211ENST00000494800 ATP13A4Q4VNC1 1196 aa17.81■□□□□ 0.44
HDAC4-211ENST00000494800 RALGPS1Q5JS13 557 aa17.81■□□□□ 0.44
HDAC4-211ENST00000494800 LRRC73Q5JTD7 316 aa17.81■□□□□ 0.44
HDAC4-211ENST00000494800 KYAT3Q6YP21 454 aaKnown RBP17.81■□□□□ 0.44
HDAC4-211ENST00000494800 ABI3BPQ7Z7G0 1075 aa17.81■□□□□ 0.44
HDAC4-211ENST00000494800 GLRX5Q86SX6 157 aa17.81■□□□□ 0.44
HDAC4-211ENST00000494800 SPATS2Q86XZ4 545 aaKnown RBP17.81■□□□□ 0.44
HDAC4-211ENST00000494800 TP53INP2Q8IXH6 220 aa17.81■□□□□ 0.44
HDAC4-211ENST00000494800 TRAF3IP1Q8TDR0 691 aaPredicted RBP17.81■□□□□ 0.44
HDAC4-211ENST00000494800 MAK16Q9BXY0 300 aaKnown RBP17.81■□□□□ 0.44
HDAC4-211ENST00000494800 SCUBE2Q9NQ36 999 aa17.81■□□□□ 0.44
HDAC4-211ENST00000494800 LRRD1A4D1F6 860 aa17.8■□□□□ 0.44
HDAC4-211ENST00000494800 SPOPO43791 374 aa17.8■□□□□ 0.44
HDAC4-211ENST00000494800 BUB1BO60566 1050 aaPredicted RBP17.8■□□□□ 0.44
HDAC4-211ENST00000494800 MMP20O60882 483 aa17.8■□□□□ 0.44
HDAC4-211ENST00000494800 KDELR1P24390 212 aa17.8■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms