RNA–Protein interactions for RNA: ENST00000494780.1

COL27A1-208, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 4

Gene COL27A1, Length 514 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-208ENST00000494780 SHROOM3Q8TF72 1996 aa23.54■■□□□ 1.36
COL27A1-208ENST00000494780 TEX51A0A1B0GUA7 166 aa23.53■■□□□ 1.36
COL27A1-208ENST00000494780 CPED1A4D0V7 1026 aa23.53■■□□□ 1.36
COL27A1-208ENST00000494780 EME2A4GXA9 379 aaPredicted RBP23.53■■□□□ 1.36
COL27A1-208ENST00000494780 MMP20O60882 483 aa23.53■■□□□ 1.36
COL27A1-208ENST00000494780 TM7SF2O76062 418 aa23.53■■□□□ 1.36
COL27A1-208ENST00000494780 IGFALSP35858 605 aa23.53■■□□□ 1.36
COL27A1-208ENST00000494780 ERVPABLB-1P60509 514 aa23.53■■□□□ 1.36
COL27A1-208ENST00000494780 RHOAP61586 193 aa23.53■■□□□ 1.36
COL27A1-208ENST00000494780 SYCP1Q15431 976 aa23.53■■□□□ 1.36
COL27A1-208ENST00000494780 ISXQ2M1V0 245 aa23.53■■□□□ 1.36
COL27A1-208ENST00000494780 GUSBP11Q6P575 273 aa23.53■■□□□ 1.36
COL27A1-208ENST00000494780 EFL1Q7Z2Z2 1120 aaKnown RBP23.53■■□□□ 1.36
COL27A1-208ENST00000494780 VPS36Q86VN1 386 aa23.53■■□□□ 1.36
COL27A1-208ENST00000494780 PYROXD2Q8N2H3 581 aa23.53■■□□□ 1.36
COL27A1-208ENST00000494780 CXorf40AQ8TE69 158 aa23.53■■□□□ 1.36
COL27A1-208ENST00000494780 GRAMD1AQ96CP6 724 aa23.53■■□□□ 1.36
COL27A1-208ENST00000494780 FANCLQ9NW38 375 aa23.53■■□□□ 1.36
COL27A1-208ENST00000494780 APOBEC3BQ9UH17 382 aaKnown RBP23.53■■□□□ 1.36
COL27A1-208ENST00000494780 TGM2P21980 687 aa23.52■■□□□ 1.36
COL27A1-208ENST00000494780 RPIAP49247 311 aa23.52■■□□□ 1.36
COL27A1-208ENST00000494780 SUOXP51687 545 aa23.52■■□□□ 1.36
COL27A1-208ENST00000494780 ZNF143P52747 638 aaPredicted RBP23.52■■□□□ 1.36
COL27A1-208ENST00000494780 NR0B2Q15466 257 aa23.52■■□□□ 1.36
COL27A1-208ENST00000494780 LRRC73Q5JTD7 316 aa23.52■■□□□ 1.36
COL27A1-208ENST00000494780 SCYL2Q6P3W7 929 aa23.52■■□□□ 1.36
COL27A1-208ENST00000494780 MON1BQ7L1V2 547 aa23.52■■□□□ 1.36
COL27A1-208ENST00000494780 PHACTR4Q8IZ21 702 aa23.52■■□□□ 1.36
COL27A1-208ENST00000494780 RBFAQ8N0V3 343 aa23.52■■□□□ 1.36
COL27A1-208ENST00000494780 NEK11Q8NG66 645 aa23.52■■□□□ 1.36
COL27A1-208ENST00000494780 GLMNQ92990 594 aa23.52■■□□□ 1.36
COL27A1-208ENST00000494780 BOCQ9BWV1 1114 aa23.52■■□□□ 1.36
COL27A1-208ENST00000494780 KLC2Q9H0B6 622 aa23.52■■□□□ 1.36
COL27A1-208ENST00000494780 ANKRD62A6NC57 917 aa23.51■■□□□ 1.35
COL27A1-208ENST00000494780 WASH4PA8MWX3 477 aa23.51■■□□□ 1.35
COL27A1-208ENST00000494780 RASA4BC9J798 803 aa23.51■■□□□ 1.35
COL27A1-208ENST00000494780 CCP110O43303 1012 aa23.51■■□□□ 1.35
COL27A1-208ENST00000494780 RASA4O43374 803 aa23.51■■□□□ 1.35
COL27A1-208ENST00000494780 TIMP2P16035 220 aa23.51■■□□□ 1.35
COL27A1-208ENST00000494780 COPB1P53618 953 aaKnown RBP23.51■■□□□ 1.35
COL27A1-208ENST00000494780 AIF1P55008 147 aa23.51■■□□□ 1.35
COL27A1-208ENST00000494780 C1QBPQ07021 282 aaKnown RBP23.51■■□□□ 1.35
COL27A1-208ENST00000494780 C19orf57Q0VDD7 668 aa23.51■■□□□ 1.35
COL27A1-208ENST00000494780 SERINC3Q13530 473 aa23.51■■□□□ 1.35
COL27A1-208ENST00000494780 PARP15Q460N3 678 aa23.51■■□□□ 1.35
COL27A1-208ENST00000494780 IGF2-ASQ6U949 168 aa23.51■■□□□ 1.35
COL27A1-208ENST00000494780 MACC1Q6ZN28 852 aa23.51■■□□□ 1.35
COL27A1-208ENST00000494780 TP53I13Q8NBR0 393 aaPredicted RBP23.51■■□□□ 1.35
COL27A1-208ENST00000494780 ANKRD20A12PQ8NF67 263 aa23.51■■□□□ 1.35
COL27A1-208ENST00000494780 HMCESQ96FZ2 354 aa23.51■■□□□ 1.35
COL27A1-208ENST00000494780 PCMTD1Q96MG8 357 aaPredicted RBP23.51■■□□□ 1.35
COL27A1-208ENST00000494780 EPAS1Q99814 870 aa23.51■■□□□ 1.35
COL27A1-208ENST00000494780 CPEB1Q9BZB8 566 aaKnown RBP23.51■■□□□ 1.35
COL27A1-208ENST00000494780 SLC13A1Q9BZW2 595 aa23.51■■□□□ 1.35
COL27A1-208ENST00000494780 TCEAL2Q9H3H9 227 aaPredicted RBP23.51■■□□□ 1.35
COL27A1-208ENST00000494780 CATSPERBQ9H7T0 1116 aa23.51■■□□□ 1.35
COL27A1-208ENST00000494780 FZD10Q9ULW2 581 aa23.51■■□□□ 1.35
COL27A1-208ENST00000494780 TCRBV5S1A1TA0A578 114 aa23.5■■□□□ 1.35
COL27A1-208ENST00000494780 LMO7DNF2Z398 122 aa23.5■■□□□ 1.35
COL27A1-208ENST00000494780 CREB3O43889 395 aa23.5■■□□□ 1.35
COL27A1-208ENST00000494780 GCATO75600 419 aa23.5■■□□□ 1.35
COL27A1-208ENST00000494780 ADKP55263 362 aaKnown RBP23.5■■□□□ 1.35
COL27A1-208ENST00000494780 CXADRP78310 365 aa23.5■■□□□ 1.35
COL27A1-208ENST00000494780 TMEM52BQ4KMG9 183 aa23.5■■□□□ 1.35
COL27A1-208ENST00000494780 PRRT3Q5FWE3 981 aa23.5■■□□□ 1.35
COL27A1-208ENST00000494780 C6orf132Q5T0Z8 1188 aa23.5■■□□□ 1.35
COL27A1-208ENST00000494780 DNAJC24Q6P3W2 148 aa23.5■■□□□ 1.35
COL27A1-208ENST00000494780 CLEC17AQ6ZS10 378 aa23.5■■□□□ 1.35
COL27A1-208ENST00000494780 UMODL1-AS1Q8N2C9 162 aa23.5■■□□□ 1.35
COL27A1-208ENST00000494780 HCAR2Q8TDS4 363 aa23.5■■□□□ 1.35
COL27A1-208ENST00000494780 LRRC61Q9BV99 259 aa23.5■■□□□ 1.35
COL27A1-208ENST00000494780 ASCL3Q9NQ33 180 aa23.5■■□□□ 1.35
COL27A1-208ENST00000494780 MBNL1Q9NR56 388 aaKnown RBP23.5■■□□□ 1.35
COL27A1-208ENST00000494780 THSD1Q9NS62 852 aa23.5■■□□□ 1.35
COL27A1-208ENST00000494780 LMBRD1Q9NUN5 540 aa23.5■■□□□ 1.35
COL27A1-208ENST00000494780 SEPT11Q9NVA2 429 aaKnown RBP23.5■■□□□ 1.35
COL27A1-208ENST00000494780 LIMA1Q9UHB6 759 aaKnown RBP23.5■■□□□ 1.35
COL27A1-208ENST00000494780 LGALS16A8MUM7 142 aa23.49■■□□□ 1.35
COL27A1-208ENST00000494780 FGF10O15520 208 aaPredicted RBP23.49■■□□□ 1.35
COL27A1-208ENST00000494780 TCEA3O75764 348 aa23.49■■□□□ 1.35
COL27A1-208ENST00000494780 PRB1P04280 392 aa23.49■■□□□ 1.35
COL27A1-208ENST00000494780 ANXA6P08133 673 aa23.49■■□□□ 1.35
COL27A1-208ENST00000494780 XPAP23025 273 aaPredicted RBP23.49■■□□□ 1.35
COL27A1-208ENST00000494780 EIF4A3P38919 411 aaKnown RBP23.49■■□□□ 1.35
COL27A1-208ENST00000494780 UCNP55089 124 aa23.49■■□□□ 1.35
COL27A1-208ENST00000494780 ELP6Q0PNE2 266 aa23.49■■□□□ 1.35
COL27A1-208ENST00000494780 C1orf61Q13536 156 aa23.49■■□□□ 1.35
COL27A1-208ENST00000494780 KLHL40Q2TBA0 621 aa23.49■■□□□ 1.35
COL27A1-208ENST00000494780 FAXCQ5TGI0 409 aa23.49■■□□□ 1.35
COL27A1-208ENST00000494780 BROXQ5VW32 411 aa23.49■■□□□ 1.35
COL27A1-208ENST00000494780 RBM44Q6ZP01 1051 aaKnown RBP23.49■■□□□ 1.35
COL27A1-208ENST00000494780 RBM43Q6ZSC3 357 aaKnown RBP23.49■■□□□ 1.35
COL27A1-208ENST00000494780 WDR48Q8TAF3 677 aa23.49■■□□□ 1.35
COL27A1-208ENST00000494780 NAT6Q93015 286 aa23.49■■□□□ 1.35
COL27A1-208ENST00000494780 NAF1Q96HR8 494 aaKnown RBP23.49■■□□□ 1.35
COL27A1-208ENST00000494780 MCEEQ96PE7 176 aa23.49■■□□□ 1.35
COL27A1-208ENST00000494780 AGPAT1Q99943 283 aa23.49■■□□□ 1.35
COL27A1-208ENST00000494780 CNPY3Q9BT09 278 aa23.49■■□□□ 1.35
COL27A1-208ENST00000494780 WRAP53Q9BUR4 548 aaKnown RBP23.49■■□□□ 1.35
COL27A1-208ENST00000494780 LHX3Q9UBR4 397 aa23.49■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms