RNA–Protein interactions for RNA: ENST00000494613.5

LIMS2-216, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 2

Gene LIMS2, Length 1,137 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-216ENST00000494613 ZSCAN30Q86W11 494 aa15.79■□□□□ 0.12
LIMS2-216ENST00000494613 MARCH9Q86YJ5 346 aa15.79■□□□□ 0.12
LIMS2-216ENST00000494613 TP53INP2Q8IXH6 220 aa15.79■□□□□ 0.12
LIMS2-216ENST00000494613 HSPH1Q92598 858 aa15.79■□□□□ 0.12
LIMS2-216ENST00000494613 CENPTQ96BT3 561 aa15.79■□□□□ 0.12
LIMS2-216ENST00000494613 ARHGEF26Q96DR7 871 aa15.79■□□□□ 0.12
LIMS2-216ENST00000494613 EXOC2Q96KP1 924 aa15.79■□□□□ 0.12
LIMS2-216ENST00000494613 NUP85Q9BW27 656 aa15.79■□□□□ 0.12
LIMS2-216ENST00000494613 IP6K2Q9UHH9 426 aa15.79■□□□□ 0.12
LIMS2-216ENST00000494613 ZMIZ1Q9ULJ6 1067 aa15.79■□□□□ 0.12
LIMS2-216ENST00000494613 A6NNZ2 444 aa15.78■□□□□ 0.12
LIMS2-216ENST00000494613 MYO1FO00160 1098 aa15.78■□□□□ 0.12
LIMS2-216ENST00000494613 FPGTO14772 594 aa15.78■□□□□ 0.12
LIMS2-216ENST00000494613 CAPNS1P04632 268 aa15.78■□□□□ 0.12
LIMS2-216ENST00000494613 EIF4A3P38919 411 aaKnown RBP15.78■□□□□ 0.12
LIMS2-216ENST00000494613 CSNK1DP48730 415 aa15.78■□□□□ 0.12
LIMS2-216ENST00000494613 IL10RBQ08334 325 aa15.78■□□□□ 0.12
LIMS2-216ENST00000494613 NSUN2Q08J23 767 aaKnown RBP eCLIP15.78■□□□□ 0.12
LIMS2-216ENST00000494613 GRM3Q14832 879 aa15.78■□□□□ 0.12
LIMS2-216ENST00000494613 DPYSL2Q16555 572 aa15.78■□□□□ 0.12
LIMS2-216ENST00000494613 SMTNL2Q2TAL5 461 aa15.78■□□□□ 0.12
LIMS2-216ENST00000494613 ZNF542PQ5EBM4 170 aa15.78■□□□□ 0.12
LIMS2-216ENST00000494613 SRLQ86TD4 932 aa15.78■□□□□ 0.12
LIMS2-216ENST00000494613 CAMK1DQ8IU85 385 aa15.78■□□□□ 0.12
LIMS2-216ENST00000494613 SLC22A18ASQ8N1D0 253 aa15.78■□□□□ 0.12
LIMS2-216ENST00000494613 LZTR1Q8N653 840 aa15.78■□□□□ 0.12
LIMS2-216ENST00000494613 NPWQ8N729 165 aa15.78■□□□□ 0.12
LIMS2-216ENST00000494613 TSEN2Q8NCE0 465 aaKnown RBP15.78■□□□□ 0.12
LIMS2-216ENST00000494613 OR8K1Q8NGG5 319 aa15.78■□□□□ 0.12
LIMS2-216ENST00000494613 TSC1Q92574 1164 aa15.78■□□□□ 0.12
LIMS2-216ENST00000494613 IFT43Q96FT9 208 aa15.78■□□□□ 0.12
LIMS2-216ENST00000494613 ZNF641Q96N77 438 aaPredicted RBP15.78■□□□□ 0.12
LIMS2-216ENST00000494613 ETNK2Q9NVF9 386 aa15.78■□□□□ 0.12
LIMS2-216ENST00000494613 UCKL1Q9NWZ5 548 aa15.78■□□□□ 0.12
LIMS2-216ENST00000494613 IPO11Q9UI26 975 aaKnown RBP15.78■□□□□ 0.12
LIMS2-216ENST00000494613 MAP1BP46821 2468 aaKnown RBP15.78■□□□□ 0.12
LIMS2-216ENST00000494613 SPEGQ15772 3267 aa15.78■□□□□ 0.12
LIMS2-216ENST00000494613 TMEM8BA6NDV4 472 aa15.77■□□□□ 0.12
LIMS2-216ENST00000494613 H3BRJ5 948 aa15.77■□□□□ 0.12
LIMS2-216ENST00000494613 TRIM38O00635 465 aa15.77■□□□□ 0.12
LIMS2-216ENST00000494613 PIGNO95427 931 aa15.77■□□□□ 0.12
LIMS2-216ENST00000494613 TPM3P06753 285 aa15.77■□□□□ 0.12
LIMS2-216ENST00000494613 C1SP09871 688 aa15.77■□□□□ 0.12
LIMS2-216ENST00000494613 ARL4AP40617 200 aa15.77■□□□□ 0.12
LIMS2-216ENST00000494613 RGRP47804 291 aa15.77■□□□□ 0.12
LIMS2-216ENST00000494613 FZD2Q14332 565 aa15.77■□□□□ 0.12
LIMS2-216ENST00000494613 SMAD1Q15797 465 aaKnown RBP15.77■□□□□ 0.12
LIMS2-216ENST00000494613 UGP2Q16851 508 aa15.77■□□□□ 0.12
LIMS2-216ENST00000494613 TMEM52BQ4KMG9 183 aa15.77■□□□□ 0.12
LIMS2-216ENST00000494613 DHRS13Q6UX07 377 aa15.77■□□□□ 0.12
LIMS2-216ENST00000494613 GALNT15Q8N3T1 639 aa15.77■□□□□ 0.12
LIMS2-216ENST00000494613 NIPA2Q8N8Q9 360 aa15.77■□□□□ 0.12
LIMS2-216ENST00000494613 ANAPC7Q9UJX3 599 aa15.77■□□□□ 0.12
LIMS2-216ENST00000494613 PCDHGA1Q9Y5H4 931 aa15.77■□□□□ 0.12
LIMS2-216ENST00000494613 SPTY2D1-AS1A0A0U1RR47 76 aa15.76■□□□□ 0.11
LIMS2-216ENST00000494613 SIGLEC6O43699 453 aa15.76■□□□□ 0.11
LIMS2-216ENST00000494613 PIAS2O75928 621 aa15.76■□□□□ 0.11
LIMS2-216ENST00000494613 TM7SF2O76062 418 aa15.76■□□□□ 0.11
LIMS2-216ENST00000494613 CKMT2P17540 419 aa15.76■□□□□ 0.11
LIMS2-216ENST00000494613 XPAP23025 273 aaPredicted RBP15.76■□□□□ 0.11
LIMS2-216ENST00000494613 IL4RP24394 825 aa15.76■□□□□ 0.11
LIMS2-216ENST00000494613 RABIFP47224 123 aa15.76■□□□□ 0.11
LIMS2-216ENST00000494613 SUOXP51687 545 aa15.76■□□□□ 0.11
LIMS2-216ENST00000494613 PFN3P60673 137 aa15.76■□□□□ 0.11
LIMS2-216ENST00000494613 ZNF211Q13398 564 aaPredicted RBP15.76■□□□□ 0.11
LIMS2-216ENST00000494613 RFTN1Q14699 578 aaPredicted RBP15.76■□□□□ 0.11
LIMS2-216ENST00000494613 ATP13A4Q4VNC1 1196 aa15.76■□□□□ 0.11
LIMS2-216ENST00000494613 SPECC1LQ69YQ0 1117 aa15.76■□□□□ 0.11
LIMS2-216ENST00000494613 KYAT3Q6YP21 454 aaKnown RBP15.76■□□□□ 0.11
LIMS2-216ENST00000494613 KDM7AQ6ZMT4 941 aa15.76■□□□□ 0.11
LIMS2-216ENST00000494613 PTAR1Q7Z6K3 402 aaPredicted RBP15.76■□□□□ 0.11
LIMS2-216ENST00000494613 CXorf40AQ8TE69 158 aa15.76■□□□□ 0.11
LIMS2-216ENST00000494613 TEKT4Q8WW24 435 aa15.76■□□□□ 0.11
LIMS2-216ENST00000494613 NSMCE3Q96MG7 304 aa15.76■□□□□ 0.11
LIMS2-216ENST00000494613 CSPG4P5Q96PW8 444 aa15.76■□□□□ 0.11
LIMS2-216ENST00000494613 TUBGCP5Q96RT8 1024 aa15.76■□□□□ 0.11
LIMS2-216ENST00000494613 WRAP53Q9BUR4 548 aaKnown RBP15.76■□□□□ 0.11
LIMS2-216ENST00000494613 TSPY26PQ9H489 355 aa15.76■□□□□ 0.11
LIMS2-216ENST00000494613 SP110Q9HB58 689 aa15.76■□□□□ 0.11
LIMS2-216ENST00000494613 MBNL1Q9NR56 388 aaKnown RBP15.76■□□□□ 0.11
LIMS2-216ENST00000494613 GPR27Q9NS67 375 aa15.76■□□□□ 0.11
LIMS2-216ENST00000494613 STAU2Q9NUL3 570 aaKnown RBP eCLIP15.76■□□□□ 0.11
LIMS2-216ENST00000494613 DNAJC28Q9NX36 388 aa15.76■□□□□ 0.11
LIMS2-216ENST00000494613 NENFQ9UMX5 172 aa15.76■□□□□ 0.11
LIMS2-216ENST00000494613 KMT2BQ9UMN6 2715 aaPredicted RBP15.75■□□□□ 0.11
LIMS2-216ENST00000494613 PLXNB3Q9ULL4 1909 aa15.75■□□□□ 0.11
LIMS2-216ENST00000494613 FAM149AA5PLN7 773 aa15.75■□□□□ 0.11
LIMS2-216ENST00000494613 TAF4O00268 1085 aa15.75■□□□□ 0.11
LIMS2-216ENST00000494613 RIOK3O14730 519 aaKnown RBP15.75■□□□□ 0.11
LIMS2-216ENST00000494613 MUSKO15146 869 aa15.75■□□□□ 0.11
LIMS2-216ENST00000494613 CBFA2T2O43439 604 aa15.75■□□□□ 0.11
LIMS2-216ENST00000494613 CSF2P04141 144 aa15.75■□□□□ 0.11
LIMS2-216ENST00000494613 GIMD1P0DJR0 217 aa15.75■□□□□ 0.11
LIMS2-216ENST00000494613 CDK4P11802 303 aa15.75■□□□□ 0.11
LIMS2-216ENST00000494613 SSR1P43307 286 aaKnown RBP15.75■□□□□ 0.11
LIMS2-216ENST00000494613 SCNN1BP51168 640 aa15.75■□□□□ 0.11
LIMS2-216ENST00000494613 SLC25A11Q02978 314 aaKnown RBP15.75■□□□□ 0.11
LIMS2-216ENST00000494613 SLC10A7Q0GE19 358 aa15.75■□□□□ 0.11
LIMS2-216ENST00000494613 PDE1CQ14123 709 aaPredicted RBP15.75■□□□□ 0.11
LIMS2-216ENST00000494613 ASTE1Q2TB18 679 aaPredicted RBP15.75■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms