RNA–Protein interactions for RNA: ENST00000494546.1

CBX4-203, Transcript of chromobox 4, humanhuman

TSL 3

Gene CBX4, Length 432 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX4-203ENST00000494546 CINPQ9BW66 212 aaPredicted RBP33.6■■■□□ 2.97
CBX4-203ENST00000494546 C1QTNF2Q9BXJ5 285 aa33.6■■■□□ 2.97
CBX4-203ENST00000494546 PACSIN1Q9BY11 444 aa33.6■■■□□ 2.97
CBX4-203ENST00000494546 PCDH18Q9HCL0 1135 aa33.6■■■□□ 2.97
CBX4-203ENST00000494546 ETNK2Q9NVF9 386 aa33.6■■■□□ 2.97
CBX4-203ENST00000494546 DKK3Q9UBP4 350 aa33.6■■■□□ 2.97
CBX4-203ENST00000494546 IPO11Q9UI26 975 aaKnown RBP33.6■■■□□ 2.97
CBX4-203ENST00000494546 HS3ST3A1Q9Y663 406 aa33.6■■■□□ 2.97
CBX4-203ENST00000494546 TRPM6Q9BX84 2022 aa33.6■■■□□ 2.97
CBX4-203ENST00000494546 SDC3O75056 442 aa33.59■■■□□ 2.97
CBX4-203ENST00000494546 TIMP2P16035 220 aa33.59■■■□□ 2.97
CBX4-203ENST00000494546 ITIH2P19823 946 aa33.59■■■□□ 2.97
CBX4-203ENST00000494546 IL10RBQ08334 325 aa33.59■■■□□ 2.97
CBX4-203ENST00000494546 KRT81Q14533 505 aa33.59■■■□□ 2.97
CBX4-203ENST00000494546 CCDC157Q569K6 752 aa33.59■■■□□ 2.97
CBX4-203ENST00000494546 UNQ6494/PRO21346Q6UXR6 183 aa33.59■■■□□ 2.97
CBX4-203ENST00000494546 Q6ZSR6 202 aa33.59■■■□□ 2.97
CBX4-203ENST00000494546 TSEN2Q8NCE0 465 aaKnown RBP33.59■■■□□ 2.97
CBX4-203ENST00000494546 CTNNBL1Q8WYA6 563 aaPredicted RBP33.59■■■□□ 2.97
CBX4-203ENST00000494546 BMFQ96LC9 184 aa33.59■■■□□ 2.97
CBX4-203ENST00000494546 RGRP47804 291 aa33.58■■■□□ 2.97
CBX4-203ENST00000494546 GRM3Q14832 879 aa33.58■■■□□ 2.97
CBX4-203ENST00000494546 CFAP58Q5T655 872 aa33.58■■■□□ 2.97
CBX4-203ENST00000494546 SUV39H2Q9H5I1 410 aa33.58■■■□□ 2.97
CBX4-203ENST00000494546 ABHD10Q9NUJ1 306 aa33.58■■■□□ 2.97
CBX4-203ENST00000494546 MSRB2Q9Y3D2 182 aa33.58■■■□□ 2.97
CBX4-203ENST00000494546 POM121BA6NF01 834 aa33.57■■■□□ 2.96
CBX4-203ENST00000494546 AKR1B10O60218 316 aa33.57■■■□□ 2.96
CBX4-203ENST00000494546 H2AFZP0C0S5 128 aa33.57■■■□□ 2.96
CBX4-203ENST00000494546 GJC1P36383 396 aa33.57■■■□□ 2.96
CBX4-203ENST00000494546 ADKP55263 362 aaKnown RBP33.57■■■□□ 2.96
CBX4-203ENST00000494546 RFTN1Q14699 578 aaPredicted RBP33.57■■■□□ 2.96
CBX4-203ENST00000494546 HADHQ16836 314 aaKnown RBP33.57■■■□□ 2.96
CBX4-203ENST00000494546 ST3GAL2Q16842 350 aa33.57■■■□□ 2.96
CBX4-203ENST00000494546 ASTE1Q2TB18 679 aaPredicted RBP33.57■■■□□ 2.96
CBX4-203ENST00000494546 H2AFVQ71UI9 128 aa33.57■■■□□ 2.96
CBX4-203ENST00000494546 SRLQ86TD4 932 aa33.57■■■□□ 2.96
CBX4-203ENST00000494546 SLC22A18ASQ8N1D0 253 aa33.57■■■□□ 2.96
CBX4-203ENST00000494546 FAM174AQ8TBP5 190 aa33.57■■■□□ 2.96
CBX4-203ENST00000494546 CXorf40AQ8TE69 158 aa33.57■■■□□ 2.96
CBX4-203ENST00000494546 CNDP2Q96KP4 475 aaKnown RBP33.57■■■□□ 2.96
CBX4-203ENST00000494546 KLHL11Q9NVR0 708 aa33.57■■■□□ 2.96
CBX4-203ENST00000494546 UVRAGQ9P2Y5 699 aa33.57■■■□□ 2.96
CBX4-203ENST00000494546 CHD8Q9HCK8 2581 aa33.57■■■□□ 2.96
CBX4-203ENST00000494546 SSU72P8A0A1W2PR75 194 aa33.56■■■□□ 2.96
CBX4-203ENST00000494546 FPGTO14772 594 aa33.56■■■□□ 2.96
CBX4-203ENST00000494546 BUB1BO60566 1050 aaPredicted RBP33.56■■■□□ 2.96
CBX4-203ENST00000494546 MMP20O60882 483 aa33.56■■■□□ 2.96
CBX4-203ENST00000494546 MFAP3LO75121 409 aa33.56■■■□□ 2.96
CBX4-203ENST00000494546 LDOC1O95751 146 aaPredicted RBP33.56■■■□□ 2.96
CBX4-203ENST00000494546 CDH6P55285 790 aa33.56■■■□□ 2.96
CBX4-203ENST00000494546 KYAT3Q6YP21 454 aaKnown RBP33.56■■■□□ 2.96
CBX4-203ENST00000494546 CAMK1DQ8IU85 385 aa33.56■■■□□ 2.96
CBX4-203ENST00000494546 LENG8Q96PV6 779 aaPredicted RBP33.56■■■□□ 2.96
CBX4-203ENST00000494546 TUBGCP5Q96RT8 1024 aa33.56■■■□□ 2.96
CBX4-203ENST00000494546 KLF6Q99612 283 aaPredicted RBP33.56■■■□□ 2.96
CBX4-203ENST00000494546 WRAP53Q9BUR4 548 aaKnown RBP33.56■■■□□ 2.96
CBX4-203ENST00000494546 KANSL1Q7Z3B3 1105 aa33.55■■■□□ 2.96
CBX4-203ENST00000494546 CPNE8Q86YQ8 564 aa33.55■■■□□ 2.96
CBX4-203ENST00000494546 HCAR2Q8TDS4 363 aa33.55■■■□□ 2.96
CBX4-203ENST00000494546 ASB12Q8WXK4 309 aa33.55■■■□□ 2.96
CBX4-203ENST00000494546 TSC1Q92574 1164 aa33.55■■■□□ 2.96
CBX4-203ENST00000494546 GATA6Q92908 595 aa33.55■■■□□ 2.96
CBX4-203ENST00000494546 ZNF641Q96N77 438 aaPredicted RBP33.55■■■□□ 2.96
CBX4-203ENST00000494546 ENC1O14682 589 aa33.54■■■□□ 2.96
CBX4-203ENST00000494546 CSNK1DP48730 415 aa33.54■■■□□ 2.96
CBX4-203ENST00000494546 MMRN1Q13201 1228 aa33.54■■■□□ 2.96
CBX4-203ENST00000494546 TMCO4Q5TGY1 634 aa33.54■■■□□ 2.96
CBX4-203ENST00000494546 DCP2Q8IU60 420 aaKnown RBP33.54■■■□□ 2.96
CBX4-203ENST00000494546 CHP1Q99653 195 aa33.54■■■□□ 2.96
CBX4-203ENST00000494546 TMEM121BQ9BXQ6 578 aaPredicted RBP33.54■■■□□ 2.96
CBX4-203ENST00000494546 ATP13A3Q9H7F0 1226 aa33.54■■■□□ 2.96
CBX4-203ENST00000494546 SEPT3Q9UH03 358 aa33.54■■■□□ 2.96
CBX4-203ENST00000494546 TSPAN11A1L157 253 aa33.53■■■□□ 2.96
CBX4-203ENST00000494546 MUSKO15146 869 aa33.53■■■□□ 2.96
CBX4-203ENST00000494546 TM7SF2O76062 418 aa33.53■■■□□ 2.96
CBX4-203ENST00000494546 PROSCO94903 275 aa33.53■■■□□ 2.96
CBX4-203ENST00000494546 DKK1O94907 266 aa33.53■■■□□ 2.96
CBX4-203ENST00000494546 PROS1P07225 676 aa33.53■■■□□ 2.96
CBX4-203ENST00000494546 CD48P09326 243 aa33.53■■■□□ 2.96
CBX4-203ENST00000494546 SERPINA4P29622 427 aa33.53■■■□□ 2.96
CBX4-203ENST00000494546 RABIFP47224 123 aa33.53■■■□□ 2.96
CBX4-203ENST00000494546 SUOXP51687 545 aa33.53■■■□□ 2.96
CBX4-203ENST00000494546 SLC10A7Q0GE19 358 aa33.53■■■□□ 2.96
CBX4-203ENST00000494546 ELP6Q0PNE2 266 aa33.53■■■□□ 2.96
CBX4-203ENST00000494546 LBRQ14739 615 aaKnown RBP33.53■■■□□ 2.96
CBX4-203ENST00000494546 UGP2Q16851 508 aa33.53■■■□□ 2.96
CBX4-203ENST00000494546 DENND6BQ8NEG7 585 aa33.53■■■□□ 2.96
CBX4-203ENST00000494546 ZNF599Q96NL3 588 aa33.53■■■□□ 2.96
CBX4-203ENST00000494546 FAM221BA6H8Z2 402 aa33.52■■■□□ 2.96
CBX4-203ENST00000494546 TMEM253P0C7T8 217 aa33.52■■■□□ 2.96
CBX4-203ENST00000494546 SERPINB6P35237 376 aa33.52■■■□□ 2.96
CBX4-203ENST00000494546 SCNN1BP51168 640 aa33.52■■■□□ 2.96
CBX4-203ENST00000494546 NSUN2Q08J23 767 aaKnown RBP eCLIP33.52■■■□□ 2.96
CBX4-203ENST00000494546 DNAJC3Q13217 504 aa33.52■■■□□ 2.96
CBX4-203ENST00000494546 ATP13A4Q4VNC1 1196 aa33.52■■■□□ 2.96
CBX4-203ENST00000494546 ZNF542PQ5EBM4 170 aa33.52■■■□□ 2.96
CBX4-203ENST00000494546 BRAT1Q6PJG6 821 aa33.52■■■□□ 2.96
CBX4-203ENST00000494546 KDM7AQ6ZMT4 941 aa33.52■■■□□ 2.96
CBX4-203ENST00000494546 ATPAF2Q8N5M1 289 aa33.52■■■□□ 2.96
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms