RNA–Protein interactions for RNA: ENST00000494426.1

CLIC3-203, Transcript of chloride intracellular channel 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLIC3, Length 1,017 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC3-203ENST00000494426 NSMCE1Q8WV22 266 aa23.7■■□□□ 1.38
CLIC3-203ENST00000494426 ALG3Q92685 438 aa23.7■■□□□ 1.38
CLIC3-203ENST00000494426 RBM41Q96IZ5 413 aaKnown RBP23.7■■□□□ 1.38
CLIC3-203ENST00000494426 ZNF641Q96N77 438 aaPredicted RBP23.7■■□□□ 1.38
CLIC3-203ENST00000494426 OLFM3Q96PB7 478 aa23.7■■□□□ 1.38
CLIC3-203ENST00000494426 TUBGCP5Q96RT8 1024 aa23.7■■□□□ 1.38
CLIC3-203ENST00000494426 HERPUD2Q9BSE4 406 aa23.7■■□□□ 1.38
CLIC3-203ENST00000494426 SAE1Q9UBE0 346 aaPredicted RBP23.7■■□□□ 1.38
CLIC3-203ENST00000494426 AMFRQ9UKV5 643 aa23.7■■□□□ 1.38
CLIC3-203ENST00000494426 ZFR2Q9UPR6 939 aaKnown RBP23.7■■□□□ 1.38
CLIC3-203ENST00000494426 TSPAN11A1L157 253 aa23.69■■□□□ 1.38
CLIC3-203ENST00000494426 WNT9AO14904 365 aa23.69■■□□□ 1.38
CLIC3-203ENST00000494426 AP1G1O43747 822 aa23.69■■□□□ 1.38
CLIC3-203ENST00000494426 FTCDO95954 541 aa23.69■■□□□ 1.38
CLIC3-203ENST00000494426 ITIH2P19823 946 aa23.69■■□□□ 1.38
CLIC3-203ENST00000494426 HSPA9P38646 679 aaKnown RBP23.69■■□□□ 1.38
CLIC3-203ENST00000494426 TFDP2Q14188 446 aa23.69■■□□□ 1.38
CLIC3-203ENST00000494426 PPP2R5EQ16537 467 aa23.69■■□□□ 1.38
CLIC3-203ENST00000494426 AASDHQ4L235 1098 aaPredicted RBP23.69■■□□□ 1.38
CLIC3-203ENST00000494426 NEK5Q6P3R8 708 aa23.69■■□□□ 1.38
CLIC3-203ENST00000494426 ZNF662Q6ZS27 426 aa23.69■■□□□ 1.38
CLIC3-203ENST00000494426 PEX26Q7Z412 305 aa23.69■■□□□ 1.38
CLIC3-203ENST00000494426 RABEPKQ7Z6M1 372 aa23.69■■□□□ 1.38
CLIC3-203ENST00000494426 CCDC13Q8IYE1 715 aa23.69■■□□□ 1.38
CLIC3-203ENST00000494426 CCNYQ8ND76 341 aa23.69■■□□□ 1.38
CLIC3-203ENST00000494426 RAB7BQ96AH8 199 aa23.69■■□□□ 1.38
CLIC3-203ENST00000494426 NUDCD1Q96RS6 583 aa23.69■■□□□ 1.38
CLIC3-203ENST00000494426 NUSAP1Q9BXS6 441 aaKnown RBP23.69■■□□□ 1.38
CLIC3-203ENST00000494426 TSGA10Q9BZW7 698 aa23.69■■□□□ 1.38
CLIC3-203ENST00000494426 TM9SF3Q9HD45 589 aa23.69■■□□□ 1.38
CLIC3-203ENST00000494426 GUCA1BQ9UMX6 200 aa23.69■■□□□ 1.38
CLIC3-203ENST00000494426 PACSIN2Q9UNF0 486 aaPredicted RBP23.69■■□□□ 1.38
CLIC3-203ENST00000494426 A0A1W2PQU0 124 aa23.68■■□□□ 1.38
CLIC3-203ENST00000494426 AREL1O15033 823 aa23.68■■□□□ 1.38
CLIC3-203ENST00000494426 CCDC175P0C221 793 aa23.68■■□□□ 1.38
CLIC3-203ENST00000494426 CCNB1P14635 433 aa23.68■■□□□ 1.38
CLIC3-203ENST00000494426 PECAM1P16284 738 aaPredicted RBP23.68■■□□□ 1.38
CLIC3-203ENST00000494426 MAT2AP31153 395 aaKnown RBP23.68■■□□□ 1.38
CLIC3-203ENST00000494426 AP1S1P61966 158 aa23.68■■□□□ 1.38
CLIC3-203ENST00000494426 BNC1Q01954 994 aa23.68■■□□□ 1.38
CLIC3-203ENST00000494426 ZNF284Q2VY69 593 aa23.68■■□□□ 1.38
CLIC3-203ENST00000494426 LRRC73Q5JTD7 316 aa23.68■■□□□ 1.38
CLIC3-203ENST00000494426 FAM182AQ5T1J6 154 aa23.68■■□□□ 1.38
CLIC3-203ENST00000494426 TTC7BQ86TV6 843 aa23.68■■□□□ 1.38
CLIC3-203ENST00000494426 CCDC50Q8IVM0 306 aa23.68■■□□□ 1.38
CLIC3-203ENST00000494426 SYCE1Q8N0S2 351 aa23.68■■□□□ 1.38
CLIC3-203ENST00000494426 BBS5Q8N3I7 341 aa23.68■■□□□ 1.38
CLIC3-203ENST00000494426 ECHDC3Q96DC8 303 aa23.68■■□□□ 1.38
CLIC3-203ENST00000494426 ATP13A3Q9H7F0 1226 aa23.68■■□□□ 1.38
CLIC3-203ENST00000494426 NOD2Q9HC29 1040 aa23.68■■□□□ 1.38
CLIC3-203ENST00000494426 NT5MQ9NPB1 228 aa23.68■■□□□ 1.38
CLIC3-203ENST00000494426 RBM22Q9NW64 420 aaKnown RBP eCLIP23.68■■□□□ 1.38
CLIC3-203ENST00000494426 GGT7Q9UJ14 662 aa23.68■■□□□ 1.38
CLIC3-203ENST00000494426 TPX2Q9ULW0 747 aaKnown RBP23.68■■□□□ 1.38
CLIC3-203ENST00000494426 ITM2BQ9Y287 266 aa23.68■■□□□ 1.38
CLIC3-203ENST00000494426 LOC105378220A0A1B0GUY1 285 aaPredicted RBP23.67■■□□□ 1.38
CLIC3-203ENST00000494426 TRAFD1O14545 582 aaPredicted RBP23.67■■□□□ 1.38
CLIC3-203ENST00000494426 DDX3YO15523 660 aaKnown RBP23.67■■□□□ 1.38
CLIC3-203ENST00000494426 KRT86O43790 486 aa23.67■■□□□ 1.38
CLIC3-203ENST00000494426 PCDH8O95206 1070 aa23.67■■□□□ 1.38
CLIC3-203ENST00000494426 ENGP17813 658 aa23.67■■□□□ 1.38
CLIC3-203ENST00000494426 RWDD2BP57060 319 aa23.67■■□□□ 1.38
CLIC3-203ENST00000494426 COPS2P61201 443 aa23.67■■□□□ 1.38
CLIC3-203ENST00000494426 BCL2L1Q07817 233 aa23.67■■□□□ 1.38
CLIC3-203ENST00000494426 IHHQ14623 411 aa23.67■■□□□ 1.38
CLIC3-203ENST00000494426 SEL1L3Q68CR1 1132 aa23.67■■□□□ 1.38
CLIC3-203ENST00000494426 AADACL2Q6P093 401 aa23.67■■□□□ 1.38
CLIC3-203ENST00000494426 B4GALNT4Q76KP1 1039 aa23.67■■□□□ 1.38
CLIC3-203ENST00000494426 PRPF39Q86UA1 669 aaKnown RBP23.67■■□□□ 1.38
CLIC3-203ENST00000494426 HORMAD1Q86X24 394 aa23.67■■□□□ 1.38
CLIC3-203ENST00000494426 SLC6A18Q96N87 628 aa23.67■■□□□ 1.38
CLIC3-203ENST00000494426 ZNF830Q96NB3 372 aaPredicted RBP23.67■■□□□ 1.38
CLIC3-203ENST00000494426 IL12RB2Q99665 862 aa23.67■■□□□ 1.38
CLIC3-203ENST00000494426 HEMGNQ9BXL5 484 aa23.67■■□□□ 1.38
CLIC3-203ENST00000494426 CFAP54Q96N23 3096 aa23.67■■□□□ 1.38
CLIC3-203ENST00000494426 PRR5-ARHGAP8B1AHC4 643 aa23.66■■□□□ 1.38
CLIC3-203ENST00000494426 CDX4O14627 284 aaPredicted RBP23.66■■□□□ 1.38
CLIC3-203ENST00000494426 PYGMP11217 842 aa23.66■■□□□ 1.38
CLIC3-203ENST00000494426 TGM2P21980 687 aa23.66■■□□□ 1.38
CLIC3-203ENST00000494426 SERPINA4P29622 427 aa23.66■■□□□ 1.38
CLIC3-203ENST00000494426 MAPK8P45983 427 aa23.66■■□□□ 1.38
CLIC3-203ENST00000494426 CSNK1EP49674 416 aaKnown RBP23.66■■□□□ 1.38
CLIC3-203ENST00000494426 ARHGAP8P85298 464 aa23.66■■□□□ 1.38
CLIC3-203ENST00000494426 PDK1Q15118 436 aa23.66■■□□□ 1.38
CLIC3-203ENST00000494426 TMEM259Q4ZIN3 620 aa23.66■■□□□ 1.38
CLIC3-203ENST00000494426 BBS12Q6ZW61 710 aa23.66■■□□□ 1.38
CLIC3-203ENST00000494426 KLK6Q92876 244 aa23.66■■□□□ 1.38
CLIC3-203ENST00000494426 HES6Q96HZ4 224 aa23.66■■□□□ 1.38
CLIC3-203ENST00000494426 PDLIM2Q96JY6 352 aa23.66■■□□□ 1.38
CLIC3-203ENST00000494426 EDEM2Q9BV94 578 aa23.66■■□□□ 1.38
CLIC3-203ENST00000494426 SCUBE2Q9NQ36 999 aa23.66■■□□□ 1.38
CLIC3-203ENST00000494426 PCDHGC4Q9Y5F7 938 aa23.66■■□□□ 1.38
CLIC3-203ENST00000494426 LAMA1P25391 3075 aa23.65■■□□□ 1.38
CLIC3-203ENST00000494426 KCNK1O00180 336 aa23.65■■□□□ 1.38
CLIC3-203ENST00000494426 ARHGAP33O14559 1287 aa23.65■■□□□ 1.38
CLIC3-203ENST00000494426 HTRA2O43464 458 aaPredicted RBP23.65■■□□□ 1.38
CLIC3-203ENST00000494426 TSPAN6O43657 245 aa23.65■■□□□ 1.38
CLIC3-203ENST00000494426 WNT1P04628 370 aa23.65■■□□□ 1.38
CLIC3-203ENST00000494426 HLA-DQB2P05538 268 aa23.65■■□□□ 1.38
CLIC3-203ENST00000494426 PTPN7P35236 360 aa23.65■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms