RNA–Protein interactions for RNA: ENST00000494132.1

ATG4B-224, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 2

Gene ATG4B, Length 828 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-224ENST00000494132 ELF4Q99607 663 aaPredicted RBP14.87□□□□□ -0.03
ATG4B-224ENST00000494132 WRAP53Q9BUR4 548 aaKnown RBP14.87□□□□□ -0.03
ATG4B-224ENST00000494132 GDF3Q9NR23 364 aa14.87□□□□□ -0.03
ATG4B-224ENST00000494132 PCOLCE2Q9UKZ9 415 aa14.87□□□□□ -0.03
ATG4B-224ENST00000494132 TPX2Q9ULW0 747 aaKnown RBP14.87□□□□□ -0.03
ATG4B-224ENST00000494132 GOLGA4Q13439 2230 aaKnown RBP14.86□□□□□ -0.03
ATG4B-224ENST00000494132 A0A1B0GTQ1 180 aa14.86□□□□□ -0.03
ATG4B-224ENST00000494132 AP1G1O43747 822 aa14.86□□□□□ -0.03
ATG4B-224ENST00000494132 MAFKO60675 156 aa14.86□□□□□ -0.03
ATG4B-224ENST00000494132 MMP20O60882 483 aa14.86□□□□□ -0.03
ATG4B-224ENST00000494132 SDC3O75056 442 aa14.86□□□□□ -0.03
ATG4B-224ENST00000494132 ZNF883P0CG24 379 aa14.86□□□□□ -0.03
ATG4B-224ENST00000494132 THEGLP0DJG4 465 aa14.86□□□□□ -0.03
ATG4B-224ENST00000494132 HNRNPA2B1P22626 353 aaKnown RBP14.86□□□□□ -0.03
ATG4B-224ENST00000494132 XPAP23025 273 aaPredicted RBP14.86□□□□□ -0.03
ATG4B-224ENST00000494132 PMLP29590 882 aa14.86□□□□□ -0.03
ATG4B-224ENST00000494132 AKT2P31751 481 aa14.86□□□□□ -0.03
ATG4B-224ENST00000494132 SERPINB6P35237 376 aa14.86□□□□□ -0.03
ATG4B-224ENST00000494132 SCNN1BP51168 640 aa14.86□□□□□ -0.03
ATG4B-224ENST00000494132 MAXP61244 160 aa14.86□□□□□ -0.03
ATG4B-224ENST00000494132 RPS21P63220 83 aaKnown RBP14.86□□□□□ -0.03
ATG4B-224ENST00000494132 BNIP3Q12983 259 aa14.86□□□□□ -0.03
ATG4B-224ENST00000494132 ZNF235Q14590 738 aa14.86□□□□□ -0.03
ATG4B-224ENST00000494132 TRIP6Q15654 476 aaKnown RBP14.86□□□□□ -0.03
ATG4B-224ENST00000494132 ANKRD20A8PQ5CZ79 823 aa14.86□□□□□ -0.03
ATG4B-224ENST00000494132 FAM182AQ5T1J6 154 aa14.86□□□□□ -0.03
ATG4B-224ENST00000494132 TMCO4Q5TGY1 634 aa14.86□□□□□ -0.03
ATG4B-224ENST00000494132 NCBP2-AS2Q69YL0 99 aa14.86□□□□□ -0.03
ATG4B-224ENST00000494132 KIAA1161Q6NSJ0 714 aa14.86□□□□□ -0.03
ATG4B-224ENST00000494132 PAF1Q8N7H5 531 aa14.86□□□□□ -0.03
ATG4B-224ENST00000494132 PNPLA1Q8N8W4 532 aa14.86□□□□□ -0.03
ATG4B-224ENST00000494132 OR13H1Q8NG92 308 aa14.86□□□□□ -0.03
ATG4B-224ENST00000494132 FAM71BQ8TC56 605 aa14.86□□□□□ -0.03
ATG4B-224ENST00000494132 RHBDD1Q8TEB9 315 aa14.86□□□□□ -0.03
ATG4B-224ENST00000494132 RFFLQ8WZ73 363 aa14.86□□□□□ -0.03
ATG4B-224ENST00000494132 RAPGEF5Q92565 580 aa14.86□□□□□ -0.03
ATG4B-224ENST00000494132 RAB7BQ96AH8 199 aa14.86□□□□□ -0.03
ATG4B-224ENST00000494132 KLHDC7BQ96G42 594 aa14.86□□□□□ -0.03
ATG4B-224ENST00000494132 MRFAP1L1Q96HT8 127 aa14.86□□□□□ -0.03
ATG4B-224ENST00000494132 FEM1CQ96JP0 617 aa14.86□□□□□ -0.03
ATG4B-224ENST00000494132 SLC17A9Q9BYT1 436 aa14.86□□□□□ -0.03
ATG4B-224ENST00000494132 CPEB1Q9BZB8 566 aaKnown RBP14.86□□□□□ -0.03
ATG4B-224ENST00000494132 GOLPH3Q9H4A6 298 aa14.86□□□□□ -0.03
ATG4B-224ENST00000494132 SUV39H2Q9H5I1 410 aa14.86□□□□□ -0.03
ATG4B-224ENST00000494132 COQ6Q9Y2Z9 468 aa14.86□□□□□ -0.03
ATG4B-224ENST00000494132 TPRP12270 2363 aaKnown RBP14.85□□□□□ -0.03
ATG4B-224ENST00000494132 POM121BA6NF01 834 aa14.85□□□□□ -0.03
ATG4B-224ENST00000494132 SOWAHDA6NJG2 315 aa14.85□□□□□ -0.03
ATG4B-224ENST00000494132 GOLGA8CPA6NN73 597 aa14.85□□□□□ -0.03
ATG4B-224ENST00000494132 AREL1O15033 823 aa14.85□□□□□ -0.03
ATG4B-224ENST00000494132 TSPAN6O43657 245 aa14.85□□□□□ -0.03
ATG4B-224ENST00000494132 CBFA2T3O75081 653 aa14.85□□□□□ -0.03
ATG4B-224ENST00000494132 PEX11BO96011 259 aa14.85□□□□□ -0.03
ATG4B-224ENST00000494132 KRT7P08729 469 aa14.85□□□□□ -0.03
ATG4B-224ENST00000494132 MAN1A1P33908 653 aa14.85□□□□□ -0.03
ATG4B-224ENST00000494132 NUDT1P36639 197 aa14.85□□□□□ -0.03
ATG4B-224ENST00000494132 MAGEA1P43355 309 aa14.85□□□□□ -0.03
ATG4B-224ENST00000494132 CFAP58Q5T655 872 aa14.85□□□□□ -0.03
ATG4B-224ENST00000494132 PTAR1Q7Z6K3 402 aaPredicted RBP14.85□□□□□ -0.03
ATG4B-224ENST00000494132 RHOT2Q8IXI1 618 aa14.85□□□□□ -0.03
ATG4B-224ENST00000494132 PGBD5Q8N414 524 aa14.85□□□□□ -0.03
ATG4B-224ENST00000494132 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP14.85□□□□□ -0.03
ATG4B-224ENST00000494132 SEPT3Q9UH03 358 aa14.85□□□□□ -0.03
ATG4B-224ENST00000494132 PLXNB3Q9ULL4 1909 aa14.85□□□□□ -0.03
ATG4B-224ENST00000494132 LRP4O75096 1905 aa14.84□□□□□ -0.03
ATG4B-224ENST00000494132 LRRD1A4D1F6 860 aa14.84□□□□□ -0.03
ATG4B-224ENST00000494132 FLRT2O43155 660 aa14.84□□□□□ -0.03
ATG4B-224ENST00000494132 MTA2O94776 668 aa14.84□□□□□ -0.03
ATG4B-224ENST00000494132 KDELR1P24390 212 aa14.84□□□□□ -0.03
ATG4B-224ENST00000494132 EPHA8P29322 1005 aaPredicted RBP14.84□□□□□ -0.03
ATG4B-224ENST00000494132 GBE1Q04446 702 aa14.84□□□□□ -0.03
ATG4B-224ENST00000494132 SGCGQ13326 291 aa14.84□□□□□ -0.03
ATG4B-224ENST00000494132 RFTN1Q14699 578 aaPredicted RBP14.84□□□□□ -0.03
ATG4B-224ENST00000494132 SUZ12Q15022 739 aaKnown RBP14.84□□□□□ -0.03
ATG4B-224ENST00000494132 PDK2Q15119 407 aa14.84□□□□□ -0.03
ATG4B-224ENST00000494132 CCDC157Q569K6 752 aa14.84□□□□□ -0.03
ATG4B-224ENST00000494132 ZNF542PQ5EBM4 170 aa14.84□□□□□ -0.03
ATG4B-224ENST00000494132 IQCHQ86VS3 1027 aa14.84□□□□□ -0.03
ATG4B-224ENST00000494132 SLC22A18ASQ8N1D0 253 aa14.84□□□□□ -0.03
ATG4B-224ENST00000494132 PQLC3Q8N755 202 aa14.84□□□□□ -0.03
ATG4B-224ENST00000494132 CXorf40AQ8TE69 158 aa14.84□□□□□ -0.03
ATG4B-224ENST00000494132 BMFQ96LC9 184 aa14.84□□□□□ -0.03
ATG4B-224ENST00000494132 PSKH2Q96QS6 385 aa14.84□□□□□ -0.03
ATG4B-224ENST00000494132 KLF6Q99612 283 aaPredicted RBP14.84□□□□□ -0.03
ATG4B-224ENST00000494132 ZNF670Q9BS34 389 aa14.84□□□□□ -0.03
ATG4B-224ENST00000494132 C1QTNF2Q9BXJ5 285 aa14.84□□□□□ -0.03
ATG4B-224ENST00000494132 PCDH12Q9NPG4 1184 aa14.84□□□□□ -0.03
ATG4B-224ENST00000494132 RCOR3Q9P2K3 495 aaPredicted RBP14.84□□□□□ -0.03
ATG4B-224ENST00000494132 DKK3Q9UBP4 350 aa14.84□□□□□ -0.03
ATG4B-224ENST00000494132 PCDHGB2Q9Y5G2 931 aa14.84□□□□□ -0.03
ATG4B-224ENST00000494132 SPEGQ15772 3267 aa14.83□□□□□ -0.03
ATG4B-224ENST00000494132 COL5A1P20908 1838 aaPredicted RBP14.83□□□□□ -0.04
ATG4B-224ENST00000494132 TSPAN11A1L157 253 aa14.83□□□□□ -0.04
ATG4B-224ENST00000494132 A8MX80 341 aa14.83□□□□□ -0.04
ATG4B-224ENST00000494132 HYAL3O43820 417 aaPredicted RBP14.83□□□□□ -0.04
ATG4B-224ENST00000494132 PCDHGA12O60330 932 aa14.83□□□□□ -0.04
ATG4B-224ENST00000494132 KRT1P04264 644 aa14.83□□□□□ -0.04
ATG4B-224ENST00000494132 ITGAVP06756 1048 aa14.83□□□□□ -0.04
ATG4B-224ENST00000494132 FTH1P19P0C7X4 201 aa14.83□□□□□ -0.04
ATG4B-224ENST00000494132 SERPINA4P29622 427 aa14.83□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms