RNA–Protein interactions for RNA: ENST00000493945.5

ACTB-213, Transcript of actin beta, humanhuman

TSL 5

Gene ACTB, Length 1,236 nt, Biotype retained intron, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-213ENST00000493945 ERAP2Q6P179 960 aa15.07■□□□□ 0
ACTB-213ENST00000493945 KIAA1324Q6UXG2 1013 aaKnown RBP15.07■□□□□ 0
ACTB-213ENST00000493945 TMPRSS6Q8IU80 811 aa15.07■□□□□ 0
ACTB-213ENST00000493945 MMAAQ8IVH4 418 aaKnown RBP15.07■□□□□ 0
ACTB-213ENST00000493945 PGBD5Q8N414 524 aa15.07■□□□□ 0
ACTB-213ENST00000493945 CNTD1Q8N815 330 aa15.07■□□□□ 0
ACTB-213ENST00000493945 OR6K2Q8NGY2 324 aa15.07■□□□□ 0
ACTB-213ENST00000493945 PDCD6IPQ8WUM4 868 aaKnown RBP15.07■□□□□ 0
ACTB-213ENST00000493945 RAB7BQ96AH8 199 aa15.07■□□□□ 0
ACTB-213ENST00000493945 FEM1CQ96JP0 617 aa15.07■□□□□ 0
ACTB-213ENST00000493945 SPACA7Q96KW9 195 aa15.07■□□□□ 0
ACTB-213ENST00000493945 RBM15Q96T37 977 aaKnown RBP eCLIP15.07■□□□□ 02e-12■□□□□ 10.2
ACTB-213ENST00000493945 OMDQ99983 421 aa15.07■□□□□ 0
ACTB-213ENST00000493945 C1QTNF1Q9BXJ1 281 aa15.07■□□□□ 0
ACTB-213ENST00000493945 TDRD1Q9BXT4 1180 aaKnown RBP15.07■□□□□ 0
ACTB-213ENST00000493945 FRMD8Q9BZ67 464 aaPredicted RBP15.07■□□□□ 0
ACTB-213ENST00000493945 FAM129AQ9BZQ8 928 aa15.07■□□□□ 0
ACTB-213ENST00000493945 SUV39H2Q9H5I1 410 aa15.07■□□□□ 0
ACTB-213ENST00000493945 NOD2Q9HC29 1040 aa15.07■□□□□ 0
ACTB-213ENST00000493945 DKK3Q9UBP4 350 aa15.07■□□□□ 0
ACTB-213ENST00000493945 TTI1O43156 1089 aa15.06■□□□□ 0
ACTB-213ENST00000493945 SLC7A4O43246 635 aa15.06■□□□□ 0
ACTB-213ENST00000493945 ZNF821O75541 412 aaPredicted RBP15.06■□□□□ 0
ACTB-213ENST00000493945 FGF1P05230 155 aa15.06■□□□□ 0
ACTB-213ENST00000493945 APRTP07741 180 aa15.06■□□□□ 0
ACTB-213ENST00000493945 CYP2A6P11509 494 aaPredicted RBP15.06■□□□□ 0
ACTB-213ENST00000493945 RPL22P35268 128 aaKnown RBP15.06■□□□□ 0
ACTB-213ENST00000493945 GRIA4P48058 902 aa15.06■□□□□ 0
ACTB-213ENST00000493945 VPS41P49754 854 aa15.06■□□□□ 0
ACTB-213ENST00000493945 NEK3P51956 506 aa15.06■□□□□ 0
ACTB-213ENST00000493945 NRLP54845 237 aa15.06■□□□□ 0
ACTB-213ENST00000493945 CAV1Q03135 178 aa15.06■□□□□ 0
ACTB-213ENST00000493945 CDK18Q07002 472 aa15.06■□□□□ 0
ACTB-213ENST00000493945 ELP6Q0PNE2 266 aa15.06■□□□□ 0
ACTB-213ENST00000493945 MTAPQ13126 283 aa15.06■□□□□ 0
ACTB-213ENST00000493945 SEMA5AQ13591 1074 aa15.06■□□□□ 0
ACTB-213ENST00000493945 LAMB3Q13751 1172 aa15.06■□□□□ 0
ACTB-213ENST00000493945 ARSIQ5FYB1 569 aa15.06■□□□□ 0
ACTB-213ENST00000493945 FBXL19Q6PCT2 694 aa15.06■□□□□ 0
ACTB-213ENST00000493945 CEP128Q6ZU80 1094 aa15.06■□□□□ 0
ACTB-213ENST00000493945 USP30Q70CQ3 517 aa15.06■□□□□ 0
ACTB-213ENST00000493945 USP45Q70EL2 814 aa15.06■□□□□ 0
ACTB-213ENST00000493945 HOOK3Q86VS8 718 aa15.06■□□□□ 0
ACTB-213ENST00000493945 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP15.06■□□□□ 0
ACTB-213ENST00000493945 IPMKQ8NFU5 416 aa15.06■□□□□ 0
ACTB-213ENST00000493945 HMGB4Q8WW32 186 aa15.06■□□□□ 0
ACTB-213ENST00000493945 SNF8Q96H20 258 aa15.06■□□□□ 0
ACTB-213ENST00000493945 ZDHHC4Q9NPG8 344 aa15.06■□□□□ 0
ACTB-213ENST00000493945 HCN2Q9UL51 889 aa15.06■□□□□ 0
ACTB-213ENST00000493945 PPM1HQ9ULR3 514 aa15.06■□□□□ 0
ACTB-213ENST00000493945 FZD4Q9ULV1 537 aa15.06■□□□□ 0
ACTB-213ENST00000493945 RAI2Q9Y5P3 530 aa15.06■□□□□ 0
ACTB-213ENST00000493945 WASF2Q9Y6W5 498 aa15.06■□□□□ 0
ACTB-213ENST00000493945 BDP1A6H8Y1 2624 aa15.06■□□□□ 0
ACTB-213ENST00000493945 A0A1W2PQF6 199 aa15.05■□□□□ -0
ACTB-213ENST00000493945 MUSKO15146 869 aa15.05■□□□□ -0
ACTB-213ENST00000493945 PMPCBO75439 489 aa15.05■□□□□ -0
ACTB-213ENST00000493945 AP2A1O95782 977 aa15.05■□□□□ -0
ACTB-213ENST00000493945 TPSB2P20231 275 aa15.05■□□□□ -0
ACTB-213ENST00000493945 OXTRP30559 389 aa15.05■□□□□ -0
ACTB-213ENST00000493945 SLC8A1P32418 973 aa15.05■□□□□ -0
ACTB-213ENST00000493945 CD68P34810 354 aaPredicted RBP15.05■□□□□ -0
ACTB-213ENST00000493945 SKOR1P84550 965 aa15.05■□□□□ -0
ACTB-213ENST00000493945 FZD5Q13467 585 aa15.05■□□□□ -0
ACTB-213ENST00000493945 TRIP13Q15645 432 aaPredicted RBP15.05■□□□□ -0
ACTB-213ENST00000493945 TPSAB1Q15661 275 aa15.05■□□□□ -0
ACTB-213ENST00000493945 PCSK7Q16549 785 aa15.05■□□□□ -0
ACTB-213ENST00000493945 ANO7Q6IWH7 933 aa15.05■□□□□ -0
ACTB-213ENST00000493945 C11orf74Q86VG3 221 aa15.05■□□□□ -0
ACTB-213ENST00000493945 PPIL6Q8IXY8 311 aa15.05■□□□□ -0
ACTB-213ENST00000493945 CHST14Q8NCH0 376 aa15.05■□□□□ -0
ACTB-213ENST00000493945 ARRDC2Q8TBH0 407 aa15.05■□□□□ -0
ACTB-213ENST00000493945 SPOCK2Q92563 424 aa15.05■□□□□ -0
ACTB-213ENST00000493945 RMDN1Q96DB5 314 aa15.05■□□□□ -0
ACTB-213ENST00000493945 KLHL32Q96NJ5 620 aa15.05■□□□□ -0
ACTB-213ENST00000493945 TBL1YQ9BQ87 522 aa15.05■□□□□ -0
ACTB-213ENST00000493945 ERP44Q9BS26 406 aa15.05■□□□□ -0
ACTB-213ENST00000493945 PABPC3Q9H361 631 aaKnown RBP15.05■□□□□ -0
ACTB-213ENST00000493945 HACD3Q9P035 362 aa15.05■□□□□ -0
ACTB-213ENST00000493945 TPX2Q9ULW0 747 aaKnown RBP15.05■□□□□ -0
ACTB-213ENST00000493945 PHTF1Q9UMS5 762 aa15.05■□□□□ -0
ACTB-213ENST00000493945 CCDC163A0A0D9SF12 145 aa15.04■□□□□ -0
ACTB-213ENST00000493945 PRR33A8MZF0 331 aa15.04■□□□□ -0
ACTB-213ENST00000493945 UPK3BL1B0FP48 263 aa15.04■□□□□ -0
ACTB-213ENST00000493945 UPK3BL2E5RIL1 263 aa15.04■□□□□ -0
ACTB-213ENST00000493945 NEMP1O14524 444 aa15.04■□□□□ -0
ACTB-213ENST00000493945 HTRA2O43464 458 aaPredicted RBP15.04■□□□□ -0
ACTB-213ENST00000493945 RAD51CO43502 376 aa15.04■□□□□ -0
ACTB-213ENST00000493945 PGLSO95336 258 aa15.04■□□□□ -0
ACTB-213ENST00000493945 PIGNO95427 931 aa15.04■□□□□ -0
ACTB-213ENST00000493945 NDST3O95803 873 aa15.04■□□□□ -0
ACTB-213ENST00000493945 CHRM1P11229 460 aaPredicted RBP15.04■□□□□ -0
ACTB-213ENST00000493945 MCM3P25205 808 aa15.04■□□□□ -0
ACTB-213ENST00000493945 RGRP47804 291 aa15.04■□□□□ -0
ACTB-213ENST00000493945 WNT3AP56704 352 aa15.04■□□□□ -0
ACTB-213ENST00000493945 RPS14P62263 151 aaKnown RBP15.04■□□□□ -0
ACTB-213ENST00000493945 NIPAL4Q0D2K0 466 aa15.04■□□□□ -0
ACTB-213ENST00000493945 CDH17Q12864 832 aa15.04■□□□□ -0
ACTB-213ENST00000493945 MORF4L2Q15014 288 aa15.04■□□□□ -0
ACTB-213ENST00000493945 ARMC3Q5W041 872 aa15.04■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms