RNA–Protein interactions for RNA: ENST00000493468.6

PRPF40A-211, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 1 (best)

Gene PRPF40A, Length 1,043 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-211ENST00000493468 UTP20O75691 2785 aaKnown RBP14.45□□□□□ -0.1
PRPF40A-211ENST00000493468 TMEM110-MUSTN1A8MSY1 372 aa14.44□□□□□ -0.1
PRPF40A-211ENST00000493468 I6L893 689 aaPredicted RBP14.44□□□□□ -0.1
PRPF40A-211ENST00000493468 THAP12O43422 761 aa14.44□□□□□ -0.1
PRPF40A-211ENST00000493468 RASGRP1O95267 797 aa14.44□□□□□ -0.1
PRPF40A-211ENST00000493468 GNA15P30679 374 aa14.44□□□□□ -0.1
PRPF40A-211ENST00000493468 POLE2P56282 527 aa14.44□□□□□ -0.1
PRPF40A-211ENST00000493468 SKIDA1Q1XH10 827 aa14.44□□□□□ -0.1
PRPF40A-211ENST00000493468 C11orf57Q6ZUT1 292 aaPredicted RBP14.44□□□□□ -0.1
PRPF40A-211ENST00000493468 TFAP2DQ7Z6R9 452 aa14.44□□□□□ -0.1
PRPF40A-211ENST00000493468 PTRH1Q86Y79 214 aaKnown RBP14.44□□□□□ -0.1
PRPF40A-211ENST00000493468 EHBP1Q8NDI1 1231 aa14.44□□□□□ -0.1
PRPF40A-211ENST00000493468 ZNF397Q8NF99 534 aaPredicted RBP14.44□□□□□ -0.1
PRPF40A-211ENST00000493468 PGAP3Q96FM1 320 aaPredicted RBP14.44□□□□□ -0.1
PRPF40A-211ENST00000493468 OSBPL1AQ9BXW6 950 aa14.44□□□□□ -0.1
PRPF40A-211ENST00000493468 WDCPQ9H6R7 721 aa14.44□□□□□ -0.1
PRPF40A-211ENST00000493468 ATP13A1Q9HD20 1204 aa14.44□□□□□ -0.1
PRPF40A-211ENST00000493468 ANLNQ9NQW6 1124 aa14.44□□□□□ -0.1
PRPF40A-211ENST00000493468 HECAQ9UBI9 543 aaPredicted RBP14.44□□□□□ -0.1
PRPF40A-211ENST00000493468 FCF1Q9Y324 198 aaKnown RBP14.44□□□□□ -0.1
PRPF40A-211ENST00000493468 PAXBP1Q9Y5B6 917 aa14.44□□□□□ -0.1
PRPF40A-211ENST00000493468 SPENQ96T58 3664 aaKnown RBP14.43□□□□□ -0.1
PRPF40A-211ENST00000493468 ICE1Q9Y2F5 2266 aa14.43□□□□□ -0.1
PRPF40A-211ENST00000493468 TRIM49BA6NDI0 452 aa14.43□□□□□ -0.1
PRPF40A-211ENST00000493468 STMND1H3BQB6 276 aa14.43□□□□□ -0.1
PRPF40A-211ENST00000493468 GRAP2O75791 330 aa14.43□□□□□ -0.1
PRPF40A-211ENST00000493468 TM7SF2O76062 418 aa14.43□□□□□ -0.1
PRPF40A-211ENST00000493468 ZNF202O95125 648 aa14.43□□□□□ -0.1
PRPF40A-211ENST00000493468 CTSEP14091 401 aa14.43□□□□□ -0.1
PRPF40A-211ENST00000493468 GLB1P16278 677 aa14.43□□□□□ -0.1
PRPF40A-211ENST00000493468 DNA2P51530 1060 aa14.43□□□□□ -0.1
PRPF40A-211ENST00000493468 PKP1Q13835 747 aa14.43□□□□□ -0.1
PRPF40A-211ENST00000493468 ALG11Q2TAA5 492 aa14.43□□□□□ -0.1
PRPF40A-211ENST00000493468 C4orf17Q53FE4 359 aa14.43□□□□□ -0.1
PRPF40A-211ENST00000493468 CERCAMQ5T4B2 595 aa14.43□□□□□ -0.1
PRPF40A-211ENST00000493468 ARTNQ5T4W7 220 aa14.43□□□□□ -0.1
PRPF40A-211ENST00000493468 TMEM164Q5U3C3 297 aa14.43□□□□□ -0.1
PRPF40A-211ENST00000493468 FAM183BPQ6ZVS7 135 aa14.43□□□□□ -0.1
PRPF40A-211ENST00000493468 SPRED1Q7Z699 444 aa14.43□□□□□ -0.1
PRPF40A-211ENST00000493468 WDTC1Q8N5D0 677 aa14.43□□□□□ -0.1
PRPF40A-211ENST00000493468 GPBAR1Q8TDU6 330 aa14.43□□□□□ -0.1
PRPF40A-211ENST00000493468 NT5C3BQ969T7 300 aa14.43□□□□□ -0.1
PRPF40A-211ENST00000493468 VOPP1Q96AW1 172 aa14.43□□□□□ -0.1
PRPF40A-211ENST00000493468 GSDMAQ96QA5 445 aa14.43□□□□□ -0.1
PRPF40A-211ENST00000493468 NPY6RQ99463 290 aa14.43□□□□□ -0.1
PRPF40A-211ENST00000493468 GTPBP4Q9BZE4 634 aaKnown RBP14.43□□□□□ -0.1
PRPF40A-211ENST00000493468 MBNL1Q9NR56 388 aaKnown RBP14.43□□□□□ -0.1
PRPF40A-211ENST00000493468 MPP6Q9NZW5 540 aa14.43□□□□□ -0.1
PRPF40A-211ENST00000493468 ARHGEF17Q96PE2 2063 aaPredicted RBP14.43□□□□□ -0.1
PRPF40A-211ENST00000493468 CD160O95971 181 aa14.42□□□□□ -0.1
PRPF40A-211ENST00000493468 GSRP00390 522 aa14.42□□□□□ -0.1
PRPF40A-211ENST00000493468 F9P00740 461 aa14.42□□□□□ -0.1
PRPF40A-211ENST00000493468 ATP1A2P50993 1020 aa14.42□□□□□ -0.1
PRPF40A-211ENST00000493468 MAPK10P53779 464 aa14.42□□□□□ -0.1
PRPF40A-211ENST00000493468 GEMIN4P57678 1058 aaKnown RBP14.42□□□□□ -0.1
PRPF40A-211ENST00000493468 SNX16P57768 344 aa14.42□□□□□ -0.1
PRPF40A-211ENST00000493468 GNA12Q03113 381 aa14.42□□□□□ -0.1
PRPF40A-211ENST00000493468 NFATC4Q14934 902 aa14.42□□□□□ -0.1
PRPF40A-211ENST00000493468 IRF4Q15306 451 aa14.42□□□□□ -0.1
PRPF40A-211ENST00000493468 OGFOD3Q6PK18 319 aa14.42□□□□□ -0.1
PRPF40A-211ENST00000493468 ENOSF1Q7L5Y1 443 aa14.42□□□□□ -0.1
PRPF40A-211ENST00000493468 HID1Q8IV36 788 aa14.42□□□□□ -0.1
PRPF40A-211ENST00000493468 ATL2Q8NHH9 583 aa14.42□□□□□ -0.1
PRPF40A-211ENST00000493468 CXorf40AQ8TE69 158 aa14.42□□□□□ -0.1
PRPF40A-211ENST00000493468 CATSPER2Q96P56 530 aa14.42□□□□□ -0.1
PRPF40A-211ENST00000493468 RBM15Q96T37 977 aaKnown RBP eCLIP14.42□□□□□ -0.11e-6■■□□□ 13.4
PRPF40A-211ENST00000493468 SPON2Q9BUD6 331 aa14.42□□□□□ -0.1
PRPF40A-211ENST00000493468 TM6SF2Q9BZW4 377 aa14.42□□□□□ -0.1
PRPF40A-211ENST00000493468 CDH19Q9H159 772 aa14.42□□□□□ -0.1
PRPF40A-211ENST00000493468 GOLPH3LQ9H4A5 285 aa14.42□□□□□ -0.1
PRPF40A-211ENST00000493468 AKAP7Q9P0M2 348 aaPredicted RBP14.42□□□□□ -0.1
PRPF40A-211ENST00000493468 STAP1Q9ULZ2 295 aa14.42□□□□□ -0.1
PRPF40A-211ENST00000493468 PCDHGC3Q9UN70 934 aa14.42□□□□□ -0.1
PRPF40A-211ENST00000493468 RNF215Q9Y6U7 377 aa14.42□□□□□ -0.1
PRPF40A-211ENST00000493468 ANKRD36A6QL64 1941 aa14.42□□□□□ -0.1
PRPF40A-211ENST00000493468 UGT2B4P06133 528 aa14.41□□□□□ -0.1
PRPF40A-211ENST00000493468 HTR1BP28222 390 aa14.41□□□□□ -0.1
PRPF40A-211ENST00000493468 ETFBP38117 255 aa14.41□□□□□ -0.1
PRPF40A-211ENST00000493468 CCR10P46092 362 aa14.41□□□□□ -0.1
PRPF40A-211ENST00000493468 SNRPD1P62314 119 aaKnown RBP14.41□□□□□ -0.1
PRPF40A-211ENST00000493468 KRT85P78386 507 aa14.41□□□□□ -0.1
PRPF40A-211ENST00000493468 SLC6A3Q01959 620 aa14.41□□□□□ -0.1
PRPF40A-211ENST00000493468 IGFBP7Q16270 282 aa14.41□□□□□ -0.1
PRPF40A-211ENST00000493468 CLPPQ16740 277 aaPredicted RBP14.41□□□□□ -0.1
PRPF40A-211ENST00000493468 CCDC40Q4G0X9 1142 aa14.41□□□□□ -0.1
PRPF40A-211ENST00000493468 SMYD5Q6GMV2 418 aa14.41□□□□□ -0.1
PRPF40A-211ENST00000493468 ZDHHC17Q8IUH5 632 aa14.41□□□□□ -0.1
PRPF40A-211ENST00000493468 OR2AP1Q8NGE2 309 aa14.41□□□□□ -0.1
PRPF40A-211ENST00000493468 ARHGEF2Q92974 986 aaKnown RBP14.41□□□□□ -0.1
PRPF40A-211ENST00000493468 NKD1Q969G9 470 aa14.41□□□□□ -0.1
PRPF40A-211ENST00000493468 SNX21Q969T3 373 aa14.41□□□□□ -0.1
PRPF40A-211ENST00000493468 TSACCQ96A04 125 aaPredicted RBP14.41□□□□□ -0.1
PRPF40A-211ENST00000493468 ZYG11BQ9C0D3 744 aa14.41□□□□□ -0.1
PRPF40A-211ENST00000493468 INTS2Q9H0H0 1204 aaKnown RBP14.41□□□□□ -0.1
PRPF40A-211ENST00000493468 ACP6Q9NPH0 428 aa14.41□□□□□ -0.1
PRPF40A-211ENST00000493468 PCDHGA3Q9Y5H0 932 aa14.41□□□□□ -0.1
PRPF40A-211ENST00000493468 SNX10Q9Y5X0 201 aa14.41□□□□□ -0.1
PRPF40A-211ENST00000493468 DGKBQ9Y6T7 804 aa14.41□□□□□ -0.1
PRPF40A-211ENST00000493468 CREBBPQ92793 2442 aa14.4□□□□□ -0.1
PRPF40A-211ENST00000493468 KRIT1O00522 736 aa14.4□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms