RNA–Protein interactions for RNA: ENST00000493166.1

CLIP2-209, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

TSL 4

Gene CLIP2, Length 561 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-209ENST00000493166 CETN2P41208 172 aa12.93□□□□□ -0.34
CLIP2-209ENST00000493166 MAPK8P45983 427 aa12.93□□□□□ -0.34
CLIP2-209ENST00000493166 NR2C2P49116 596 aa12.93□□□□□ -0.34
CLIP2-209ENST00000493166 MAXP61244 160 aa12.93□□□□□ -0.34
CLIP2-209ENST00000493166 AP1S1P61966 158 aa12.93□□□□□ -0.34
CLIP2-209ENST00000493166 LMNB2Q03252 620 aa12.93□□□□□ -0.34
CLIP2-209ENST00000493166 BCL2L1Q07817 233 aa12.93□□□□□ -0.34
CLIP2-209ENST00000493166 PPIDQ08752 370 aaKnown RBP12.93□□□□□ -0.34
CLIP2-209ENST00000493166 AP1B1Q10567 949 aa12.93□□□□□ -0.34
CLIP2-209ENST00000493166 HNRNPDQ14103 355 aaKnown RBP12.93□□□□□ -0.34
CLIP2-209ENST00000493166 PDK1Q15118 436 aa12.93□□□□□ -0.34
CLIP2-209ENST00000493166 BZW1Q7L1Q6 419 aaKnown RBP12.93□□□□□ -0.34
CLIP2-209ENST00000493166 PRPF39Q86UA1 669 aaKnown RBP12.93□□□□□ -0.34
CLIP2-209ENST00000493166 TRIM69Q86WT6 500 aa12.93□□□□□ -0.34
CLIP2-209ENST00000493166 CCDC13Q8IYE1 715 aa12.93□□□□□ -0.34
CLIP2-209ENST00000493166 PGBD5Q8N414 524 aa12.93□□□□□ -0.34
CLIP2-209ENST00000493166 TEX26Q8N6G2 289 aa12.93□□□□□ -0.34
CLIP2-209ENST00000493166 PAF1Q8N7H5 531 aa12.93□□□□□ -0.34
CLIP2-209ENST00000493166 LRRN4Q8WUT4 740 aa12.93□□□□□ -0.34
CLIP2-209ENST00000493166 MAML1Q92585 1016 aa12.93□□□□□ -0.34
CLIP2-209ENST00000493166 FATE1Q969F0 183 aa12.93□□□□□ -0.34
CLIP2-209ENST00000493166 RAB7BQ96AH8 199 aa12.93□□□□□ -0.34
CLIP2-209ENST00000493166 VOPP1Q96AW1 172 aa12.93□□□□□ -0.34
CLIP2-209ENST00000493166 ZNF641Q96N77 438 aaPredicted RBP12.93□□□□□ -0.34
CLIP2-209ENST00000493166 LGMNQ99538 433 aa12.93□□□□□ -0.34
CLIP2-209ENST00000493166 MGME1Q9BQP7 344 aa12.93□□□□□ -0.34
CLIP2-209ENST00000493166 HEMGNQ9BXL5 484 aa12.93□□□□□ -0.34
CLIP2-209ENST00000493166 SUV39H2Q9H5I1 410 aa12.93□□□□□ -0.34
CLIP2-209ENST00000493166 NT5MQ9NPB1 228 aa12.93□□□□□ -0.34
CLIP2-209ENST00000493166 SCUBE2Q9NQ36 999 aa12.93□□□□□ -0.34
CLIP2-209ENST00000493166 DKK3Q9UBP4 350 aa12.93□□□□□ -0.34
CLIP2-209ENST00000493166 TPX2Q9ULW0 747 aaKnown RBP12.93□□□□□ -0.34
CLIP2-209ENST00000493166 PACSIN2Q9UNF0 486 aaPredicted RBP12.93□□□□□ -0.34
CLIP2-209ENST00000493166 TTLL3Q9Y4R7 772 aa12.93□□□□□ -0.34
CLIP2-209ENST00000493166 DYNC1LI1Q9Y6G9 523 aaKnown RBP12.93□□□□□ -0.34
CLIP2-209ENST00000493166 A0A1W2PPC4 97 aa12.92□□□□□ -0.34
CLIP2-209ENST00000493166 TTC24A2A3L6 582 aaPredicted RBP12.92□□□□□ -0.34
CLIP2-209ENST00000493166 PRR5-ARHGAP8B1AHC4 643 aa12.92□□□□□ -0.34
CLIP2-209ENST00000493166 NEMP1O14524 444 aa12.92□□□□□ -0.34
CLIP2-209ENST00000493166 BCAT2O15382 392 aaPredicted RBP12.92□□□□□ -0.34
CLIP2-209ENST00000493166 AP1G1O43747 822 aa12.92□□□□□ -0.34
CLIP2-209ENST00000493166 RNGTTO60942 597 aaKnown RBP12.92□□□□□ -0.34
CLIP2-209ENST00000493166 PCDH8O95206 1070 aa12.92□□□□□ -0.34
CLIP2-209ENST00000493166 SERPINF2P08697 491 aa12.92□□□□□ -0.34
CLIP2-209ENST00000493166 CCNB1P14635 433 aa12.92□□□□□ -0.34
CLIP2-209ENST00000493166 MAT2AP31153 395 aaKnown RBP12.92□□□□□ -0.34
CLIP2-209ENST00000493166 ABL2P42684 1182 aa12.92□□□□□ -0.34
CLIP2-209ENST00000493166 PEX5P50542 639 aa12.92□□□□□ -0.34
CLIP2-209ENST00000493166 ITKQ08881 620 aa12.92□□□□□ -0.34
CLIP2-209ENST00000493166 GSE1Q14687 1217 aa12.92□□□□□ -0.34
CLIP2-209ENST00000493166 LRRC73Q5JTD7 316 aa12.92□□□□□ -0.34
CLIP2-209ENST00000493166 CCDC181Q5TID7 509 aa12.92□□□□□ -0.34
CLIP2-209ENST00000493166 NEK5Q6P3R8 708 aa12.92□□□□□ -0.34
CLIP2-209ENST00000493166 SLC23A3Q6PIS1 610 aa12.92□□□□□ -0.34
CLIP2-209ENST00000493166 ZNF662Q6ZS27 426 aa12.92□□□□□ -0.34
CLIP2-209ENST00000493166 TTC7BQ86TV6 843 aa12.92□□□□□ -0.34
CLIP2-209ENST00000493166 CAMK1DQ8IU85 385 aa12.92□□□□□ -0.34
CLIP2-209ENST00000493166 ALG3Q92685 438 aa12.92□□□□□ -0.34
CLIP2-209ENST00000493166 P3H4Q92791 437 aa12.92□□□□□ -0.34
CLIP2-209ENST00000493166 OLFM3Q96PB7 478 aa12.92□□□□□ -0.34
CLIP2-209ENST00000493166 ALS2CR12Q96Q35 445 aa12.92□□□□□ -0.34
CLIP2-209ENST00000493166 NUDCD1Q96RS6 583 aa12.92□□□□□ -0.34
CLIP2-209ENST00000493166 POLR1EQ9GZS1 481 aaKnown RBP12.92□□□□□ -0.34
CLIP2-209ENST00000493166 RBM22Q9NW64 420 aaKnown RBP eCLIP12.92□□□□□ -0.342e-7■■■■□ 22.2
CLIP2-209ENST00000493166 PPP2R2CQ9Y2T4 447 aa12.92□□□□□ -0.34
CLIP2-209ENST00000493166 FADS3Q9Y5Q0 445 aa12.92□□□□□ -0.34
CLIP2-209ENST00000493166 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP12.91□□□□□ -0.34
CLIP2-209ENST00000493166 A0A1W2PQU0 124 aa12.91□□□□□ -0.34
CLIP2-209ENST00000493166 LNP1A1A4G5 178 aa12.91□□□□□ -0.34
CLIP2-209ENST00000493166 C10orf142B7Z368 130 aa12.91□□□□□ -0.34
CLIP2-209ENST00000493166 KCNK1O00180 336 aa12.91□□□□□ -0.34
CLIP2-209ENST00000493166 LATO43561 262 aa12.91□□□□□ -0.34
CLIP2-209ENST00000493166 PECAM1P16284 738 aaPredicted RBP12.91□□□□□ -0.34
CLIP2-209ENST00000493166 CR2P20023 1033 aa12.91□□□□□ -0.34
CLIP2-209ENST00000493166 PTPN7P35236 360 aa12.91□□□□□ -0.34
CLIP2-209ENST00000493166 NUDT1P36639 197 aa12.91□□□□□ -0.34
CLIP2-209ENST00000493166 AFF3P51826 1226 aaKnown RBP12.91□□□□□ -0.34
CLIP2-209ENST00000493166 IRX4P78413 519 aa12.91□□□□□ -0.34
CLIP2-209ENST00000493166 ADCY2Q08462 1091 aa12.91□□□□□ -0.34
CLIP2-209ENST00000493166 SETMARQ53H47 684 aaPredicted RBP12.91□□□□□ -0.34
CLIP2-209ENST00000493166 RALGPS1Q5JS13 557 aa12.91□□□□□ -0.34
CLIP2-209ENST00000493166 KIAA1161Q6NSJ0 714 aa12.91□□□□□ -0.34
CLIP2-209ENST00000493166 BRAT1Q6PJG6 821 aa12.91□□□□□ -0.34
CLIP2-209ENST00000493166 HORMAD1Q86X24 394 aa12.91□□□□□ -0.34
CLIP2-209ENST00000493166 C1orf216Q8TAB5 229 aa12.91□□□□□ -0.34
CLIP2-209ENST00000493166 HCAR2Q8TDS4 363 aa12.91□□□□□ -0.34
CLIP2-209ENST00000493166 HAUS1Q96CS2 278 aa12.91□□□□□ -0.34
CLIP2-209ENST00000493166 PDLIM2Q96JY6 352 aa12.91□□□□□ -0.34
CLIP2-209ENST00000493166 SEMA3CQ99985 751 aa12.91□□□□□ -0.34
CLIP2-209ENST00000493166 EDEM2Q9BV94 578 aa12.91□□□□□ -0.34
CLIP2-209ENST00000493166 OSBPL8Q9BZF1 889 aa12.91□□□□□ -0.34
CLIP2-209ENST00000493166 BRD8Q9H0E9 1235 aa12.91□□□□□ -0.34
CLIP2-209ENST00000493166 NOD2Q9HC29 1040 aa12.91□□□□□ -0.34
CLIP2-209ENST00000493166 CAPN10Q9HC96 672 aa12.91□□□□□ -0.34
CLIP2-209ENST00000493166 TM9SF3Q9HD45 589 aa12.91□□□□□ -0.34
CLIP2-209ENST00000493166 FSCN3Q9NQT6 498 aa12.91□□□□□ -0.34
CLIP2-209ENST00000493166 SEPT10Q9P0V9 454 aa12.91□□□□□ -0.34
CLIP2-209ENST00000493166 SAE1Q9UBE0 346 aaPredicted RBP12.91□□□□□ -0.34
CLIP2-209ENST00000493166 AMACRQ9UHK6 382 aa12.91□□□□□ -0.34
CLIP2-209ENST00000493166 SLC6A14Q9UN76 642 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms