RNA–Protein interactions for RNA: ENST00000492977.5

PTPN7-216, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

TSL 1 (best)

Gene PTPN7, Length 1,595 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-216ENST00000492977 TTC24A2A3L6 582 aaPredicted RBP14.17□□□□□ -0.14
PTPN7-216ENST00000492977 CCDC78A2IDD5 438 aa14.17□□□□□ -0.14
PTPN7-216ENST00000492977 C2orf71A6NGG8 1288 aa14.17□□□□□ -0.14
PTPN7-216ENST00000492977 H0Y626 953 aa14.17□□□□□ -0.14
PTPN7-216ENST00000492977 GOLGA8TH3BQL2 631 aa14.17□□□□□ -0.14
PTPN7-216ENST00000492977 CBX4O00257 560 aa14.17□□□□□ -0.14
PTPN7-216ENST00000492977 TGDSO95455 350 aa14.17□□□□□ -0.14
PTPN7-216ENST00000492977 BPGMP07738 259 aa14.17□□□□□ -0.14
PTPN7-216ENST00000492977 CTNNB1P35222 781 aa14.17□□□□□ -0.14
PTPN7-216ENST00000492977 ZXDBP98169 803 aa14.17□□□□□ -0.14
PTPN7-216ENST00000492977 SF3A3Q12874 501 aaKnown RBP eCLIP14.17□□□□□ -0.14
PTPN7-216ENST00000492977 N4BP2L1Q5TBK1 243 aaPredicted RBP14.17□□□□□ -0.14
PTPN7-216ENST00000492977 KIAA0408Q6ZU52 694 aa14.17□□□□□ -0.14
PTPN7-216ENST00000492977 NUDCD3Q8IVD9 361 aa14.17□□□□□ -0.14
PTPN7-216ENST00000492977 PARP9Q8IXQ6 854 aa14.17□□□□□ -0.14
PTPN7-216ENST00000492977 MAB21L3Q8N8X9 362 aa14.17□□□□□ -0.14
PTPN7-216ENST00000492977 ZNF398Q8TD17 642 aa14.17□□□□□ -0.14
PTPN7-216ENST00000492977 TSSK1BQ9BXA7 367 aa14.17□□□□□ -0.14
PTPN7-216ENST00000492977 PLIN3O60664 434 aa14.17□□□□□ -0.14
PTPN7-216ENST00000492977 LUC7L3O95232 432 aaKnown RBP14.17□□□□□ -0.14
PTPN7-216ENST00000492977 FGF19O95750 216 aa14.17□□□□□ -0.14
PTPN7-216ENST00000492977 NDST3O95803 873 aa14.17□□□□□ -0.14
PTPN7-216ENST00000492977 AHSGP02765 367 aa14.17□□□□□ -0.14
PTPN7-216ENST00000492977 CKMP06732 381 aa14.17□□□□□ -0.14
PTPN7-216ENST00000492977 TROVE2P10155 538 aaKnown RBP eCLIP14.17□□□□□ -0.14
PTPN7-216ENST00000492977 CR2P20023 1033 aa14.17□□□□□ -0.14
PTPN7-216ENST00000492977 BGNP21810 368 aa14.17□□□□□ -0.14
PTPN7-216ENST00000492977 GLDCP23378 1020 aa14.17□□□□□ -0.14
PTPN7-216ENST00000492977 DNAJB1P25685 340 aa14.17□□□□□ -0.14
PTPN7-216ENST00000492977 CYP4F8P98187 520 aa14.17□□□□□ -0.14
PTPN7-216ENST00000492977 UBE3AQ05086 875 aa14.17□□□□□ -0.14
PTPN7-216ENST00000492977 CYTH1Q15438 398 aa14.17□□□□□ -0.14
PTPN7-216ENST00000492977 CCDC153Q494R4 210 aa14.17□□□□□ -0.14
PTPN7-216ENST00000492977 PPM1LQ5SGD2 360 aa14.17□□□□□ -0.14
PTPN7-216ENST00000492977 NEPROQ6NW34 567 aa14.17□□□□□ -0.14
PTPN7-216ENST00000492977 LCA5Q86VQ0 697 aa14.17□□□□□ -0.14
PTPN7-216ENST00000492977 CPXM2Q8N436 756 aa14.17□□□□□ -0.14
PTPN7-216ENST00000492977 CARNMT1Q8N4J0 409 aa14.17□□□□□ -0.14
PTPN7-216ENST00000492977 GBP7Q8N8V2 638 aaPredicted RBP14.17□□□□□ -0.14
PTPN7-216ENST00000492977 C2CD4AQ8NCU7 369 aaPredicted RBP14.17□□□□□ -0.14
PTPN7-216ENST00000492977 E2F7Q96AV8 911 aa14.17□□□□□ -0.14
PTPN7-216ENST00000492977 ACTR5Q9H9F9 607 aaPredicted RBP14.17□□□□□ -0.14
PTPN7-216ENST00000492977 ASAH2Q9NR71 780 aa14.17□□□□□ -0.14
PTPN7-216ENST00000492977 EMCNQ9ULC0 261 aa14.17□□□□□ -0.14
PTPN7-216ENST00000492977 RIMKLBQ9ULI2 386 aa14.17□□□□□ -0.14
PTPN7-216ENST00000492977 ANKRD6Q9Y2G4 727 aa14.17□□□□□ -0.14
PTPN7-216ENST00000492977 SH3BP1Q9Y3L3 701 aa14.17□□□□□ -0.14
PTPN7-216ENST00000492977 USH1CQ9Y6N9 552 aa14.17□□□□□ -0.14
PTPN7-216ENST00000492977 MTCL1Q9Y4B5 1905 aaKnown RBP14.17□□□□□ -0.14
PTPN7-216ENST00000492977 ALPK3Q96L96 1907 aa14.16□□□□□ -0.14
PTPN7-216ENST00000492977 A0A096LPK6 155 aa14.16□□□□□ -0.14
PTPN7-216ENST00000492977 ANKRD65E5RJM6 399 aa14.16□□□□□ -0.14
PTPN7-216ENST00000492977 INSIG1O15503 277 aa14.16□□□□□ -0.14
PTPN7-216ENST00000492977 SLC7A4O43246 635 aa14.16□□□□□ -0.14
PTPN7-216ENST00000492977 HSPA1AP0DMV8 641 aaKnown RBP14.16□□□□□ -0.14
PTPN7-216ENST00000492977 HSPA1BP0DMV9 641 aaKnown RBP14.16□□□□□ -0.14
PTPN7-216ENST00000492977 GABRB3P28472 473 aa14.16□□□□□ -0.14
PTPN7-216ENST00000492977 ALDH3A1P30838 453 aa14.16□□□□□ -0.14
PTPN7-216ENST00000492977 CSRP3P50461 194 aa14.16□□□□□ -0.14
PTPN7-216ENST00000492977 ILF2Q12905 390 aaKnown RBP14.16□□□□□ -0.14
PTPN7-216ENST00000492977 GRM3Q14832 879 aa14.16□□□□□ -0.14
PTPN7-216ENST00000492977 INO80DQ53TQ3 878 aaPredicted RBP14.16□□□□□ -0.14
PTPN7-216ENST00000492977 PPM1JQ5JR12 505 aa14.16□□□□□ -0.14
PTPN7-216ENST00000492977 MPP7Q5T2T1 576 aa14.16□□□□□ -0.14
PTPN7-216ENST00000492977 CMC1Q7Z7K0 106 aa14.16□□□□□ -0.14
PTPN7-216ENST00000492977 GALNT7Q86SF2 657 aa14.16□□□□□ -0.14
PTPN7-216ENST00000492977 LMNTD2Q8IXW0 634 aa14.16□□□□□ -0.14
PTPN7-216ENST00000492977 SPPL3Q8TCT6 385 aa14.16□□□□□ -0.14
PTPN7-216ENST00000492977 BRSK1Q8TDC3 778 aa14.16□□□□□ -0.14
PTPN7-216ENST00000492977 POF1BQ8WVV4 589 aa14.16□□□□□ -0.14
PTPN7-216ENST00000492977 ATXN7L3BQ96GX2 97 aa14.16□□□□□ -0.14
PTPN7-216ENST00000492977 NUDCD1Q96RS6 583 aa14.16□□□□□ -0.14
PTPN7-216ENST00000492977 TRIB3Q96RU7 358 aa14.16□□□□□ -0.14
PTPN7-216ENST00000492977 CORO1BQ9BR76 489 aa14.16□□□□□ -0.14
PTPN7-216ENST00000492977 FEM1AQ9BSK4 669 aa14.16□□□□□ -0.14
PTPN7-216ENST00000492977 MTIF3Q9H2K0 278 aaKnown RBP14.16□□□□□ -0.14
PTPN7-216ENST00000492977 NOD2Q9HC29 1040 aa14.16□□□□□ -0.14
PTPN7-216ENST00000492977 SCUBE2Q9NQ36 999 aa14.16□□□□□ -0.14
PTPN7-216ENST00000492977 TLR9Q9NR96 1032 aa14.16□□□□□ -0.14
PTPN7-216ENST00000492977 FBXO5Q9UKT4 447 aa14.16□□□□□ -0.14
PTPN7-216ENST00000492977 OR51B4Q9Y5P0 310 aa14.16□□□□□ -0.14
PTPN7-216ENST00000492977 ACTL7AQ9Y615 435 aa14.16□□□□□ -0.14
PTPN7-216ENST00000492977 LCHNA4D1U4 455 aa14.15□□□□□ -0.14
PTPN7-216ENST00000492977 HIDE1A8MVS5 230 aa14.15□□□□□ -0.14
PTPN7-216ENST00000492977 MYO1CO00159 1063 aa14.15□□□□□ -0.14
PTPN7-216ENST00000492977 LDB2O43679 373 aa14.15□□□□□ -0.14
PTPN7-216ENST00000492977 GJB3O75712 270 aa14.15□□□□□ -0.14
PTPN7-216ENST00000492977 ZMPSTE24O75844 475 aa14.15□□□□□ -0.14
PTPN7-216ENST00000492977 GSRP00390 522 aa14.15□□□□□ -0.14
PTPN7-216ENST00000492977 PROCP04070 461 aa14.15□□□□□ -0.14
PTPN7-216ENST00000492977 C2P06681 752 aa14.15□□□□□ -0.14
PTPN7-216ENST00000492977 MYL4P12829 197 aa14.15□□□□□ -0.14
PTPN7-216ENST00000492977 DDX6P26196 483 aaKnown RBP eCLIP14.15□□□□□ -0.14
PTPN7-216ENST00000492977 SCNN1BP51168 640 aa14.15□□□□□ -0.14
PTPN7-216ENST00000492977 CLCN4P51793 760 aa14.15□□□□□ -0.14
PTPN7-216ENST00000492977 ARF5P84085 180 aa14.15□□□□□ -0.14
PTPN7-216ENST00000492977 TMPRSS15P98073 1019 aa14.15□□□□□ -0.14
PTPN7-216ENST00000492977 NSUN2Q08J23 767 aaKnown RBP eCLIP14.15□□□□□ -0.14
PTPN7-216ENST00000492977 CCDC15Q0P6D6 951 aa14.15□□□□□ -0.14
PTPN7-216ENST00000492977 CTBP1Q13363 440 aa14.15□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms