RNA–Protein interactions for RNA: ENST00000492883.5

CCM2-217, Transcript of CCM2 scaffold protein, humanhuman

TSL 2

Gene CCM2, Length 1,061 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-217ENST00000492883 RALGPS1Q5JS13 557 aa14.12□□□□□ -0.15
CCM2-217ENST00000492883 MEI1Q5TIA1 1274 aa14.12□□□□□ -0.15
CCM2-217ENST00000492883 NEK5Q6P3R8 708 aa14.12□□□□□ -0.15
CCM2-217ENST00000492883 PRPF39Q86UA1 669 aaKnown RBP14.12□□□□□ -0.15
CCM2-217ENST00000492883 C12orf50Q8NA57 414 aaPredicted RBP14.12□□□□□ -0.15
CCM2-217ENST00000492883 RAB7BQ96AH8 199 aa14.12□□□□□ -0.15
CCM2-217ENST00000492883 VOPP1Q96AW1 172 aa14.12□□□□□ -0.15
CCM2-217ENST00000492883 FEM1CQ96JP0 617 aa14.12□□□□□ -0.15
CCM2-217ENST00000492883 SEMA3CQ99985 751 aa14.12□□□□□ -0.15
CCM2-217ENST00000492883 SMOC1Q9H4F8 434 aa14.12□□□□□ -0.15
CCM2-217ENST00000492883 PREBQ9HCU5 417 aa14.12□□□□□ -0.15
CCM2-217ENST00000492883 SUSD2Q9UGT4 822 aa14.12□□□□□ -0.15
CCM2-217ENST00000492883 AMACRQ9UHK6 382 aa14.12□□□□□ -0.15
CCM2-217ENST00000492883 TPX2Q9ULW0 747 aaKnown RBP14.12□□□□□ -0.15
CCM2-217ENST00000492883 FADS3Q9Y5Q0 445 aa14.12□□□□□ -0.15
CCM2-217ENST00000492883 DOCK4Q8N1I0 1966 aa14.12□□□□□ -0.15
CCM2-217ENST00000492883 MYO18AQ92614 2054 aaKnown RBP14.11□□□□□ -0.15
CCM2-217ENST00000492883 H7C0C1 242 aa14.11□□□□□ -0.15
CCM2-217ENST00000492883 APOC4-APOC2K7ER74 178 aa14.11□□□□□ -0.15
CCM2-217ENST00000492883 KHNYNO15037 678 aaKnown RBP14.11□□□□□ -0.15
CCM2-217ENST00000492883 APOC2P02655 101 aa14.11□□□□□ -0.15
CCM2-217ENST00000492883 CFIP05156 583 aa14.11□□□□□ -0.15
CCM2-217ENST00000492883 IGHV4-34P06331 123 aa14.11□□□□□ -0.15
CCM2-217ENST00000492883 TIMP2P16035 220 aa14.11□□□□□ -0.15
CCM2-217ENST00000492883 CES1P23141 567 aa14.11□□□□□ -0.15
CCM2-217ENST00000492883 CD27P26842 260 aa14.11□□□□□ -0.15
CCM2-217ENST00000492883 HOXD12P35452 270 aa14.11□□□□□ -0.15
CCM2-217ENST00000492883 ABL2P42684 1182 aa14.11□□□□□ -0.15
CCM2-217ENST00000492883 ATP5OP48047 213 aa14.11□□□□□ -0.15
CCM2-217ENST00000492883 CCR5P51681 352 aa14.11□□□□□ -0.15
CCM2-217ENST00000492883 POLR2LP62875 67 aaKnown RBP14.11□□□□□ -0.15
CCM2-217ENST00000492883 IFI35P80217 286 aaPredicted RBP14.11□□□□□ -0.15
CCM2-217ENST00000492883 OTUD4Q01804 1114 aaKnown RBP14.11□□□□□ -0.15
CCM2-217ENST00000492883 DUOXA1Q1HG43 343 aa14.11□□□□□ -0.15
CCM2-217ENST00000492883 TRIM61Q5EBN2 209 aa14.11□□□□□ -0.15
CCM2-217ENST00000492883 PLA2G2CQ5R387 149 aa14.11□□□□□ -0.15
CCM2-217ENST00000492883 SEL1L2Q5TEA6 688 aa14.11□□□□□ -0.15
CCM2-217ENST00000492883 BRAT1Q6PJG6 821 aa14.11□□□□□ -0.15
CCM2-217ENST00000492883 RABEPKQ7Z6M1 372 aa14.11□□□□□ -0.15
CCM2-217ENST00000492883 REXO1L1PQ8IX06 675 aa14.11□□□□□ -0.15
CCM2-217ENST00000492883 CEP76Q8TAP6 659 aa14.11□□□□□ -0.15
CCM2-217ENST00000492883 ACTL9Q8TC94 416 aa14.11□□□□□ -0.15
CCM2-217ENST00000492883 PDCD6IPQ8WUM4 868 aaKnown RBP14.11□□□□□ -0.15
CCM2-217ENST00000492883 AGAP3Q96P47 875 aa14.11□□□□□ -0.15
CCM2-217ENST00000492883 IL12RB2Q99665 862 aa14.11□□□□□ -0.15
CCM2-217ENST00000492883 HERPUD2Q9BSE4 406 aa14.11□□□□□ -0.15
CCM2-217ENST00000492883 CEP41Q9BYV8 373 aa14.11□□□□□ -0.15
CCM2-217ENST00000492883 PCDHGC4Q9Y5F7 938 aa14.11□□□□□ -0.15
CCM2-217ENST00000492883 A0A1W2PPC4 97 aa14.1□□□□□ -0.15
CCM2-217ENST00000492883 A0A1W2PQU0 124 aa14.1□□□□□ -0.15
CCM2-217ENST00000492883 HACD1B0YJ81 288 aa14.1□□□□□ -0.15
CCM2-217ENST00000492883 PRR5-ARHGAP8B1AHC4 643 aa14.1□□□□□ -0.15
CCM2-217ENST00000492883 PATE3B3GLJ2 98 aa14.1□□□□□ -0.15
CCM2-217ENST00000492883 KCNK3O14649 394 aa14.1□□□□□ -0.15
CCM2-217ENST00000492883 BCAT2O15382 392 aaPredicted RBP14.1□□□□□ -0.15
CCM2-217ENST00000492883 MTSS1O43312 755 aa14.1□□□□□ -0.15
CCM2-217ENST00000492883 TSPAN6O43657 245 aa14.1□□□□□ -0.15
CCM2-217ENST00000492883 AP1G1O43747 822 aa14.1□□□□□ -0.15
CCM2-217ENST00000492883 HLA-DQB2P05538 268 aa14.1□□□□□ -0.15
CCM2-217ENST00000492883 SUOXP51687 545 aa14.1□□□□□ -0.15
CCM2-217ENST00000492883 EIF3EP60228 445 aaKnown RBP14.1□□□□□ -0.15
CCM2-217ENST00000492883 PPP2CBP62714 309 aa14.1□□□□□ -0.15
CCM2-217ENST00000492883 PPP2CAP67775 309 aa14.1□□□□□ -0.15
CCM2-217ENST00000492883 DSC2Q02487 901 aa14.1□□□□□ -0.15
CCM2-217ENST00000492883 ZBTB17Q13105 803 aa14.1□□□□□ -0.15
CCM2-217ENST00000492883 XRCC4Q13426 336 aa14.1□□□□□ -0.15
CCM2-217ENST00000492883 PRKD1Q15139 912 aaPredicted RBP14.1□□□□□ -0.15
CCM2-217ENST00000492883 NOMO1Q15155 1222 aa14.1□□□□□ -0.15
CCM2-217ENST00000492883 UGP2Q16851 508 aa14.1□□□□□ -0.15
CCM2-217ENST00000492883 LRRC73Q5JTD7 316 aa14.1□□□□□ -0.15
CCM2-217ENST00000492883 PEAR1Q5VY43 1037 aaPredicted RBP14.1□□□□□ -0.15
CCM2-217ENST00000492883 TRIM69Q86WT6 500 aa14.1□□□□□ -0.15
CCM2-217ENST00000492883 HORMAD1Q86X24 394 aa14.1□□□□□ -0.15
CCM2-217ENST00000492883 KIAA2013Q8IYS2 634 aa14.1□□□□□ -0.15
CCM2-217ENST00000492883 ZCCHC9Q8N567 271 aaKnown RBP14.1□□□□□ -0.15
CCM2-217ENST00000492883 CNTD1Q8N815 330 aa14.1□□□□□ -0.15
CCM2-217ENST00000492883 NSMCE3Q96MG7 304 aa14.1□□□□□ -0.15
CCM2-217ENST00000492883 FERMT1Q9BQL6 677 aa14.1□□□□□ -0.15
CCM2-217ENST00000492883 NUSAP1Q9BXS6 441 aaKnown RBP14.1□□□□□ -0.15
CCM2-217ENST00000492883 PARD6AQ9NPB6 346 aa14.1□□□□□ -0.15
CCM2-217ENST00000492883 ATP8A1Q9Y2Q0 1164 aa14.1□□□□□ -0.15
CCM2-217ENST00000492883 RAI2Q9Y5P3 530 aa14.1□□□□□ -0.15
CCM2-217ENST00000492883 CKAP5Q14008 2032 aa14.1□□□□□ -0.15
CCM2-217ENST00000492883 A0A1B0GTW7 788 aa14.09□□□□□ -0.15
CCM2-217ENST00000492883 A0A1W2PQ67 120 aa14.09□□□□□ -0.15
CCM2-217ENST00000492883 TSPAN11A1L157 253 aa14.09□□□□□ -0.15
CCM2-217ENST00000492883 UPK3BL1B0FP48 263 aa14.09□□□□□ -0.15
CCM2-217ENST00000492883 UPK3BL2E5RIL1 263 aa14.09□□□□□ -0.15
CCM2-217ENST00000492883 TRAFD1O14545 582 aaPredicted RBP14.09□□□□□ -0.15
CCM2-217ENST00000492883 KIF5CO60282 957 aa14.09□□□□□ -0.15
CCM2-217ENST00000492883 FOXD2O60548 495 aaPredicted RBP14.09□□□□□ -0.15
CCM2-217ENST00000492883 SOCS5O75159 536 aa14.09□□□□□ -0.15
CCM2-217ENST00000492883 ITIH2P19823 946 aa14.09□□□□□ -0.15
CCM2-217ENST00000492883 TGM1P22735 817 aa14.09□□□□□ -0.15
CCM2-217ENST00000492883 NUDT1P36639 197 aa14.09□□□□□ -0.15
CCM2-217ENST00000492883 RPS21P63220 83 aaKnown RBP14.09□□□□□ -0.15
CCM2-217ENST00000492883 FAM193AP78312 1265 aa14.09□□□□□ -0.15
CCM2-217ENST00000492883 IRX4P78413 519 aa14.09□□□□□ -0.15
CCM2-217ENST00000492883 ELP6Q0PNE2 266 aa14.09□□□□□ -0.15
CCM2-217ENST00000492883 SF3A2Q15428 464 aaKnown RBP14.09□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms