RNA–Protein interactions for RNA: ENST00000492859.5

BRCA1-220, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,584 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-220ENST00000492859 LRRC42Q9Y546 428 aa4.27□□□□□ -1.73
BRCA1-220ENST00000492859 PCDHA8Q9Y5H6 950 aa4.27□□□□□ -1.73
BRCA1-220ENST00000492859 FRMPD4Q14CM0 1322 aa4.27□□□□□ -1.73
BRCA1-220ENST00000492859 KRTAP9-6A0A140TA67 174 aa4.27□□□□□ -1.73
BRCA1-220ENST00000492859 FAM237AA0A1B0GTK4 181 aa4.27□□□□□ -1.73
BRCA1-220ENST00000492859 C2orf92A0A1B0GVN3 265 aa4.27□□□□□ -1.73
BRCA1-220ENST00000492859 NPIPB15A6NHN6 443 aaPredicted RBP4.27□□□□□ -1.73
BRCA1-220ENST00000492859 ERVV-2B6SEH9 535 aa4.27□□□□□ -1.73
BRCA1-220ENST00000492859 E7ENQ6 273 aa4.27□□□□□ -1.73
BRCA1-220ENST00000492859 PRR23D1E9PI22 279 aaPredicted RBP4.27□□□□□ -1.73
BRCA1-220ENST00000492859 TNFRSF10CO14798 259 aa4.27□□□□□ -1.73
BRCA1-220ENST00000492859 ALOX15BO15296 676 aa4.27□□□□□ -1.73
BRCA1-220ENST00000492859 SLC16A3O15427 465 aaKnown RBP4.27□□□□□ -1.73
BRCA1-220ENST00000492859 PHGDHO43175 533 aaKnown RBP4.27□□□□□ -1.73
BRCA1-220ENST00000492859 SPINT1O43278 529 aa4.27□□□□□ -1.73
BRCA1-220ENST00000492859 AP5Z1O43299 807 aa4.27□□□□□ -1.73
BRCA1-220ENST00000492859 ECE2O60344 883 aa4.27□□□□□ -1.73
BRCA1-220ENST00000492859 NDUFS6O75380 124 aaKnown RBP4.27□□□□□ -1.73
BRCA1-220ENST00000492859 AKAP3O75969 853 aa4.27□□□□□ -1.73
BRCA1-220ENST00000492859 SORBS2O94875 1100 aaKnown RBP4.27□□□□□ -1.73
BRCA1-220ENST00000492859 ARHGEF15O94989 841 aa4.27□□□□□ -1.73
BRCA1-220ENST00000492859 HTR3BO95264 441 aa4.27□□□□□ -1.73
BRCA1-220ENST00000492859 MT-ATP6P00846 226 aa4.27□□□□□ -1.73
BRCA1-220ENST00000492859 PRLP01236 227 aa4.27□□□□□ -1.73
BRCA1-220ENST00000492859 PRKCBP05771 671 aa4.27□□□□□ -1.73
BRCA1-220ENST00000492859 ITGA2BP08514 1039 aa4.27□□□□□ -1.73
BRCA1-220ENST00000492859 CYP21A2P08686 494 aa4.27□□□□□ -1.73
BRCA1-220ENST00000492859 KRT7P08729 469 aa4.27□□□□□ -1.73
BRCA1-220ENST00000492859 CNPP09543 421 aaKnown RBP4.27□□□□□ -1.73
BRCA1-220ENST00000492859 PRR23D2P0DMB1 279 aaPredicted RBP4.27□□□□□ -1.73
BRCA1-220ENST00000492859 KITP10721 976 aa4.27□□□□□ -1.73
BRCA1-220ENST00000492859 THRBP10828 461 aa4.27□□□□□ -1.73
BRCA1-220ENST00000492859 MLNP12872 115 aa4.27□□□□□ -1.73
BRCA1-220ENST00000492859 CRABP2P29373 138 aa4.27□□□□□ -1.73
BRCA1-220ENST00000492859 LRPAP1P30533 357 aa4.27□□□□□ -1.73
BRCA1-220ENST00000492859 ICAM3P32942 547 aa4.27□□□□□ -1.73
BRCA1-220ENST00000492859 SHMT1P34896 483 aa4.27□□□□□ -1.73
BRCA1-220ENST00000492859 SERPINB6P35237 376 aa4.27□□□□□ -1.73
BRCA1-220ENST00000492859 ALDH3B1P43353 468 aa4.27□□□□□ -1.73
BRCA1-220ENST00000492859 GRIA4P48058 902 aa4.27□□□□□ -1.73
BRCA1-220ENST00000492859 SLC9A3P48764 834 aa4.27□□□□□ -1.73
BRCA1-220ENST00000492859 CLCN5P51795 746 aa4.27□□□□□ -1.73
BRCA1-220ENST00000492859 RPS8P62241 208 aaKnown RBP4.27□□□□□ -1.73
BRCA1-220ENST00000492859 YWHAEP62258 255 aaKnown RBP4.27□□□□□ -1.73
BRCA1-220ENST00000492859 PTPN11Q06124 597 aaPredicted RBP4.27□□□□□ -1.73
BRCA1-220ENST00000492859 SOX4Q06945 474 aaPredicted RBP4.27□□□□□ -1.73
BRCA1-220ENST00000492859 DYNC1I2Q13409 638 aaKnown RBP4.27□□□□□ -1.73
BRCA1-220ENST00000492859 DYRK1AQ13627 763 aa4.27□□□□□ -1.73
BRCA1-220ENST00000492859 LARS2Q15031 903 aaKnown RBP4.27□□□□□ -1.73
BRCA1-220ENST00000492859 MED22Q15528 200 aa4.27□□□□□ -1.73
BRCA1-220ENST00000492859 TMEM177Q53S58 311 aa4.27□□□□□ -1.73
BRCA1-220ENST00000492859 ZNF311Q5JNZ3 666 aa4.27□□□□□ -1.73
BRCA1-220ENST00000492859 RAB41Q5JT25 222 aa4.27□□□□□ -1.73
BRCA1-220ENST00000492859 MANEAQ5SRI9 462 aa4.27□□□□□ -1.73
BRCA1-220ENST00000492859 C18orf63Q68DL7 685 aa4.27□□□□□ -1.73
BRCA1-220ENST00000492859 ZNF425Q6IV72 752 aa4.27□□□□□ -1.73
BRCA1-220ENST00000492859 RINT1Q6NUQ1 792 aa4.27□□□□□ -1.73
BRCA1-220ENST00000492859 KCTD9Q7L273 389 aa4.27□□□□□ -1.73
BRCA1-220ENST00000492859 LIMS2Q7Z4I7 341 aa4.27□□□□□ -1.73
BRCA1-220ENST00000492859 HEATR3Q7Z4Q2 680 aa4.27□□□□□ -1.73
BRCA1-220ENST00000492859 OFCC1Q8IZS5 231 aa4.27□□□□□ -1.73
BRCA1-220ENST00000492859 MINDY1Q8N5J2 469 aa4.27□□□□□ -1.73
BRCA1-220ENST00000492859 TBC1D19Q8N5T2 526 aa4.27□□□□□ -1.73
BRCA1-220ENST00000492859 ARFGAP1Q8N6T3 406 aa4.27□□□□□ -1.73
BRCA1-220ENST00000492859 MAB21L3Q8N8X9 362 aa4.27□□□□□ -1.73
BRCA1-220ENST00000492859 ASCC1Q8N9N2 400 aaKnown RBP4.27□□□□□ -1.73
BRCA1-220ENST00000492859 GLIS1Q8NBF1 620 aa4.27□□□□□ -1.73
BRCA1-220ENST00000492859 C11orf65Q8NCR3 313 aa4.27□□□□□ -1.73
BRCA1-220ENST00000492859 BPIFCQ8NFQ6 507 aa4.27□□□□□ -1.73
BRCA1-220ENST00000492859 STEAP2Q8NFT2 490 aa4.27□□□□□ -1.73
BRCA1-220ENST00000492859 ANGPTL6Q8NI99 470 aa4.27□□□□□ -1.73
BRCA1-220ENST00000492859 UBA3Q8TBC4 463 aa4.27□□□□□ -1.73
BRCA1-220ENST00000492859 PAQR8Q8TEZ7 354 aa4.27□□□□□ -1.73
BRCA1-220ENST00000492859 HEXDCQ8WVB3 486 aa4.27□□□□□ -1.73
BRCA1-220ENST00000492859 CAPSLQ8WWF8 208 aa4.27□□□□□ -1.73
BRCA1-220ENST00000492859 CFHR4Q92496 578 aa4.27□□□□□ -1.73
BRCA1-220ENST00000492859 APBB2Q92870 758 aa4.27□□□□□ -1.73
BRCA1-220ENST00000492859 GAL3ST3Q96A11 431 aa4.27□□□□□ -1.73
BRCA1-220ENST00000492859 SLAMF9Q96A28 289 aa4.27□□□□□ -1.73
BRCA1-220ENST00000492859 SHISA4Q96DD7 197 aa4.27□□□□□ -1.73
BRCA1-220ENST00000492859 ZNF479Q96JC4 524 aa4.27□□□□□ -1.73
BRCA1-220ENST00000492859 SLC41A2Q96JW4 573 aa4.27□□□□□ -1.73
BRCA1-220ENST00000492859 FAM227BQ96M60 508 aa4.27□□□□□ -1.73
BRCA1-220ENST00000492859 MMP19Q99542 508 aa4.27□□□□□ -1.73
BRCA1-220ENST00000492859 KCNS3Q9BQ31 491 aa4.27□□□□□ -1.73
BRCA1-220ENST00000492859 DBNDD2Q9BQY9 259 aa4.27□□□□□ -1.73
BRCA1-220ENST00000492859 ACBD6Q9BR61 282 aa4.27□□□□□ -1.73
BRCA1-220ENST00000492859 PIMREGQ9BSJ6 248 aa4.27□□□□□ -1.73
BRCA1-220ENST00000492859 WDR18Q9BV38 432 aa4.27□□□□□ -1.73
BRCA1-220ENST00000492859 TLR10Q9BXR5 811 aa4.27□□□□□ -1.73
BRCA1-220ENST00000492859 IFIH1Q9BYX4 1025 aaKnown RBP4.27□□□□□ -1.73
BRCA1-220ENST00000492859 CELF4Q9BZC1 486 aaKnown RBP4.27□□□□□ -1.73
BRCA1-220ENST00000492859 FHDC1Q9C0D6 1143 aaPredicted RBP4.27□□□□□ -1.73
BRCA1-220ENST00000492859 NDEL1Q9GZM8 345 aa4.27□□□□□ -1.73
BRCA1-220ENST00000492859 VCX2Q9H322 139 aa4.27□□□□□ -1.73
BRCA1-220ENST00000492859 TDRD3Q9H7E2 651 aaKnown RBP4.27□□□□□ -1.73
BRCA1-220ENST00000492859 GPRC5CQ9NQ84 441 aa4.27□□□□□ -1.73
BRCA1-220ENST00000492859 MBNL1Q9NR56 388 aaKnown RBP4.27□□□□□ -1.73
BRCA1-220ENST00000492859 DNAJC11Q9NVH1 559 aa4.27□□□□□ -1.73
BRCA1-220ENST00000492859 RHBDL2Q9NX52 303 aa4.27□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms