RNA–Protein interactions for RNA: ENST00000492601.2

SGMS1-204, Transcript of sphingomyelin synthase 1, humanhuman

TSL 1 (best)

Gene SGMS1, Length 625 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGMS1-204ENST00000492601 PLEKHA7Q6IQ23 1121 aa17.47■□□□□ 0.39
SGMS1-204ENST00000492601 CAVIN1Q6NZI2 390 aaKnown RBP17.47■□□□□ 0.39
SGMS1-204ENST00000492601 ZNF571Q7Z3V5 609 aaPredicted RBP17.47■□□□□ 0.39
SGMS1-204ENST00000492601 ZSCAN30Q86W11 494 aa17.47■□□□□ 0.39
SGMS1-204ENST00000492601 PARGQ86W56 976 aa17.47■□□□□ 0.39
SGMS1-204ENST00000492601 ZNF548Q8NEK5 533 aaPredicted RBP17.47■□□□□ 0.39
SGMS1-204ENST00000492601 CXorf40AQ8TE69 158 aa17.47■□□□□ 0.39
SGMS1-204ENST00000492601 APOLD1Q96LR9 279 aa17.47■□□□□ 0.39
SGMS1-204ENST00000492601 DCBLD2Q96PD2 775 aa17.47■□□□□ 0.39
SGMS1-204ENST00000492601 WRAP53Q9BUR4 548 aaKnown RBP17.47■□□□□ 0.39
SGMS1-204ENST00000492601 TRIM7Q9C029 511 aa17.47■□□□□ 0.39
SGMS1-204ENST00000492601 NLGN3Q9NZ94 848 aa17.47■□□□□ 0.39
SGMS1-204ENST00000492601 UBA2Q9UBT2 640 aaPredicted RBP17.47■□□□□ 0.39
SGMS1-204ENST00000492601 KLF15Q9UIH9 416 aa17.47■□□□□ 0.39
SGMS1-204ENST00000492601 AK5Q9Y6K8 562 aa17.47■□□□□ 0.39
SGMS1-204ENST00000492601 H3BM21 787 aa17.46■□□□□ 0.39
SGMS1-204ENST00000492601 J3KR12 359 aa17.46■□□□□ 0.39
SGMS1-204ENST00000492601 EEF2KO00418 725 aaKnown RBP17.46■□□□□ 0.39
SGMS1-204ENST00000492601 SCAMP1O15126 338 aa17.46■□□□□ 0.39
SGMS1-204ENST00000492601 FTLP02792 175 aaPredicted RBP17.46■□□□□ 0.39
SGMS1-204ENST00000492601 CSF2P04141 144 aa17.46■□□□□ 0.39
SGMS1-204ENST00000492601 NME1P15531 152 aaKnown RBP17.46■□□□□ 0.39
SGMS1-204ENST00000492601 TIMP2P16035 220 aa17.46■□□□□ 0.39
SGMS1-204ENST00000492601 PPP1R2P3Q6NXS1 205 aa17.46■□□□□ 0.39
SGMS1-204ENST00000492601 ARFGAP1Q8N6T3 406 aa17.46■□□□□ 0.39
SGMS1-204ENST00000492601 DENND6BQ8NEG7 585 aa17.46■□□□□ 0.39
SGMS1-204ENST00000492601 ASB12Q8WXK4 309 aa17.46■□□□□ 0.39
SGMS1-204ENST00000492601 NAP1L5Q96NT1 182 aaPredicted RBP17.46■□□□□ 0.39
SGMS1-204ENST00000492601 PEBP4Q96S96 227 aa17.46■□□□□ 0.39
SGMS1-204ENST00000492601 NCAPGQ9BPX3 1015 aa17.46■□□□□ 0.39
SGMS1-204ENST00000492601 LRRC19Q9H756 370 aa17.46■□□□□ 0.39
SGMS1-204ENST00000492601 CLCA2Q9UQC9 943 aa17.46■□□□□ 0.39
SGMS1-204ENST00000492601 MFHAS1Q9Y4C4 1052 aa17.46■□□□□ 0.39
SGMS1-204ENST00000492601 BPTFQ12830 3046 aa17.45■□□□□ 0.38
SGMS1-204ENST00000492601 FASNP49327 2511 aaKnown RBP17.45■□□□□ 0.38
SGMS1-204ENST00000492601 TMEM191CA6NGB0 347 aa17.45■□□□□ 0.38
SGMS1-204ENST00000492601 K7ESM1 405 aa17.45■□□□□ 0.38
SGMS1-204ENST00000492601 DAPK3O43293 454 aa17.45■□□□□ 0.38
SGMS1-204ENST00000492601 TM7SF2O76062 418 aa17.45■□□□□ 0.38
SGMS1-204ENST00000492601 CKMT1AP12532 417 aa17.45■□□□□ 0.38
SGMS1-204ENST00000492601 SKILP12757 684 aa17.45■□□□□ 0.38
SGMS1-204ENST00000492601 JUNDP17535 347 aa17.45■□□□□ 0.38
SGMS1-204ENST00000492601 XPAP23025 273 aaPredicted RBP17.45■□□□□ 0.38
SGMS1-204ENST00000492601 IGFALSP35858 605 aa17.45■□□□□ 0.38
SGMS1-204ENST00000492601 ZNF165P49910 485 aa17.45■□□□□ 0.38
SGMS1-204ENST00000492601 PFN3P60673 137 aa17.45■□□□□ 0.38
SGMS1-204ENST00000492601 E2F1Q01094 437 aa17.45■□□□□ 0.38
SGMS1-204ENST00000492601 EIF2B5Q13144 721 aaKnown RBP17.45■□□□□ 0.38
SGMS1-204ENST00000492601 ERMARDQ5T6L9 678 aa17.45■□□□□ 0.38
SGMS1-204ENST00000492601 PDZD3Q86UT5 571 aa17.45■□□□□ 0.38
SGMS1-204ENST00000492601 RFFLQ8WZ73 363 aa17.45■□□□□ 0.38
SGMS1-204ENST00000492601 CENPTQ96BT3 561 aa17.45■□□□□ 0.38
SGMS1-204ENST00000492601 ZNF653Q96CK0 615 aa17.45■□□□□ 0.38
SGMS1-204ENST00000492601 KCTD15Q96SI1 283 aaPredicted RBP17.45■□□□□ 0.38
SGMS1-204ENST00000492601 SNRNP25Q9BV90 132 aaKnown RBP17.45■□□□□ 0.38
SGMS1-204ENST00000492601 CPEB1Q9BZB8 566 aaKnown RBP17.45■□□□□ 0.38
SGMS1-204ENST00000492601 SLC39A8Q9C0K1 460 aa17.45■□□□□ 0.38
SGMS1-204ENST00000492601 TCEAL2Q9H3H9 227 aaPredicted RBP17.45■□□□□ 0.38
SGMS1-204ENST00000492601 PDFQ9HBH1 243 aa17.45■□□□□ 0.38
SGMS1-204ENST00000492601 AIPL1Q9NZN9 384 aa17.45■□□□□ 0.38
SGMS1-204ENST00000492601 DKK3Q9UBP4 350 aa17.45■□□□□ 0.38
SGMS1-204ENST00000492601 CNOT8Q9UFF9 292 aaKnown RBP17.45■□□□□ 0.38
SGMS1-204ENST00000492601 COQ6Q9Y2Z9 468 aa17.45■□□□□ 0.38
SGMS1-204ENST00000492601 COL27A1Q8IZC6 1860 aaPredicted RBP17.44■□□□□ 0.38
SGMS1-204ENST00000492601 LY6G6EA0A0G2JKS1 128 aa17.44■□□□□ 0.38
SGMS1-204ENST00000492601 A0A1B0GTH6 734 aa17.44■□□□□ 0.38
SGMS1-204ENST00000492601 A0A1W2PQC6 194 aa17.44■□□□□ 0.38
SGMS1-204ENST00000492601 DDX3XO00571 662 aaKnown RBP eCLIP17.44■□□□□ 0.381e-8■■■□□ 16.5
SGMS1-204ENST00000492601 AQP9O43315 295 aa17.44■□□□□ 0.38
SGMS1-204ENST00000492601 PRAMEF11O60813 436 aa17.44■□□□□ 0.38
SGMS1-204ENST00000492601 RNF8O76064 485 aa17.44■□□□□ 0.38
SGMS1-204ENST00000492601 MT-CO3P00414 261 aa17.44■□□□□ 0.38
SGMS1-204ENST00000492601 MIPP30301 263 aa17.44■□□□□ 0.38
SGMS1-204ENST00000492601 HTR7P34969 479 aa17.44■□□□□ 0.38
SGMS1-204ENST00000492601 PAPOLAP51003 745 aaKnown RBP17.44■□□□□ 0.38
SGMS1-204ENST00000492601 NDST2P52849 883 aa17.44■□□□□ 0.38
SGMS1-204ENST00000492601 THOP1P52888 689 aa17.44■□□□□ 0.38
SGMS1-204ENST00000492601 KLHL30Q0D2K2 578 aa17.44■□□□□ 0.38
SGMS1-204ENST00000492601 KLHL40Q2TBA0 621 aa17.44■□□□□ 0.38
SGMS1-204ENST00000492601 DEFB133Q30KQ1 61 aa17.44■□□□□ 0.38
SGMS1-204ENST00000492601 PPP6R3Q5H9R7 873 aaPredicted RBP17.44■□□□□ 0.38
SGMS1-204ENST00000492601 RBFAQ8N0V3 343 aa17.44■□□□□ 0.38
SGMS1-204ENST00000492601 DCBLD1Q8N8Z6 715 aa17.44■□□□□ 0.38
SGMS1-204ENST00000492601 LMX1AQ8TE12 382 aa17.44■□□□□ 0.38
SGMS1-204ENST00000492601 DUSP23Q9BVJ7 150 aa17.44■□□□□ 0.38
SGMS1-204ENST00000492601 SCUBE2Q9NQ36 999 aa17.44■□□□□ 0.38
SGMS1-204ENST00000492601 MBNL1Q9NR56 388 aaKnown RBP17.44■□□□□ 0.38
SGMS1-204ENST00000492601 MYO1AQ9UBC5 1043 aa17.44■□□□□ 0.38
SGMS1-204ENST00000492601 U3KQA8 63 aa17.44■□□□□ 0.38
SGMS1-204ENST00000492601 BAHCC1Q9P281 2608 aa17.44■□□□□ 0.38
SGMS1-204ENST00000492601 ARHGEF17Q96PE2 2063 aaPredicted RBP17.43■□□□□ 0.38
SGMS1-204ENST00000492601 ARHGAP42A6NI28 874 aa17.43■□□□□ 0.38
SGMS1-204ENST00000492601 PRPSAP2O60256 369 aa17.43■□□□□ 0.38
SGMS1-204ENST00000492601 OPA1O60313 960 aa17.43■□□□□ 0.38
SGMS1-204ENST00000492601 BUB1BO60566 1050 aaPredicted RBP17.43■□□□□ 0.38
SGMS1-204ENST00000492601 GZMAP12544 262 aa17.43■□□□□ 0.38
SGMS1-204ENST00000492601 PRKCIP41743 596 aa17.43■□□□□ 0.38
SGMS1-204ENST00000492601 TMEM52BQ4KMG9 183 aa17.43■□□□□ 0.38
SGMS1-204ENST00000492601 RFX8Q6ZV50 586 aa17.43■□□□□ 0.38
SGMS1-204ENST00000492601 CYP4V2Q6ZWL3 525 aaPredicted RBP17.43■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms