RNA–Protein interactions for RNA: ENST00000492545.1

CTDSP1-211, Transcript of CTD small phosphatase 1, humanhuman

TSL 5

Gene CTDSP1, Length 634 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-211ENST00000492545 CCDC122Q5T0U0 273 aa23.95■■□□□ 1.42
CTDSP1-211ENST00000492545 TMCO4Q5TGY1 634 aa23.95■■□□□ 1.42
CTDSP1-211ENST00000492545 OR13H1Q8NG92 308 aa23.95■■□□□ 1.42
CTDSP1-211ENST00000492545 NUP85Q9BW27 656 aa23.95■■□□□ 1.42
CTDSP1-211ENST00000492545 CALN1Q9BXU9 219 aa23.95■■□□□ 1.42
CTDSP1-211ENST00000492545 SUV39H2Q9H5I1 410 aa23.95■■□□□ 1.42
CTDSP1-211ENST00000492545 GPR27Q9NS67 375 aa23.95■■□□□ 1.42
CTDSP1-211ENST00000492545 IGF2RP11717 2491 aa23.95■■□□□ 1.42
CTDSP1-211ENST00000492545 DOCK9Q9BZ29 2069 aa23.95■■□□□ 1.42
CTDSP1-211ENST00000492545 GOLGA8CPA6NN73 597 aa23.94■■□□□ 1.42
CTDSP1-211ENST00000492545 TIMP2P16035 220 aa23.94■■□□□ 1.42
CTDSP1-211ENST00000492545 XPAP23025 273 aaPredicted RBP23.94■■□□□ 1.42
CTDSP1-211ENST00000492545 ELP6Q0PNE2 266 aa23.94■■□□□ 1.42
CTDSP1-211ENST00000492545 ILKQ13418 452 aa23.94■■□□□ 1.42
CTDSP1-211ENST00000492545 SPECC1LQ69YQ0 1117 aa23.94■■□□□ 1.42
CTDSP1-211ENST00000492545 ARHGAP12Q8IWW6 846 aa23.94■■□□□ 1.42
CTDSP1-211ENST00000492545 OR8K1Q8NGG5 319 aa23.94■■□□□ 1.42
CTDSP1-211ENST00000492545 ZNF599Q96NL3 588 aa23.94■■□□□ 1.42
CTDSP1-211ENST00000492545 KLF6Q99612 283 aaPredicted RBP23.94■■□□□ 1.42
CTDSP1-211ENST00000492545 SP110Q9HB58 689 aa23.94■■□□□ 1.42
CTDSP1-211ENST00000492545 LCMT1Q9UIC8 334 aa23.94■■□□□ 1.42
CTDSP1-211ENST00000492545 ANAPC7Q9UJX3 599 aa23.94■■□□□ 1.42
CTDSP1-211ENST00000492545 COL5A1P20908 1838 aaPredicted RBP23.94■■□□□ 1.42
CTDSP1-211ENST00000492545 SPEGQ15772 3267 aa23.94■■□□□ 1.42
CTDSP1-211ENST00000492545 AKAP13Q12802 2813 aa23.93■■□□□ 1.42
CTDSP1-211ENST00000492545 TSPAN11A1L157 253 aa23.93■■□□□ 1.42
CTDSP1-211ENST00000492545 TOR1BO14657 336 aa23.93■■□□□ 1.42
CTDSP1-211ENST00000492545 IL1R2P27930 398 aa23.93■■□□□ 1.42
CTDSP1-211ENST00000492545 RENBPP51606 427 aa23.93■■□□□ 1.42
CTDSP1-211ENST00000492545 SMAD1Q15797 465 aaKnown RBP23.93■■□□□ 1.42
CTDSP1-211ENST00000492545 HS1BP3Q53T59 392 aa23.93■■□□□ 1.42
CTDSP1-211ENST00000492545 BRAT1Q6PJG6 821 aa23.93■■□□□ 1.42
CTDSP1-211ENST00000492545 POLNQ7Z5Q5 900 aa23.93■■□□□ 1.42
CTDSP1-211ENST00000492545 CXorf40AQ8TE69 158 aa23.93■■□□□ 1.42
CTDSP1-211ENST00000492545 STAU2Q9NUL3 570 aaKnown RBP eCLIP23.93■■□□□ 1.42
CTDSP1-211ENST00000492545 IPO11Q9UI26 975 aaKnown RBP23.93■■□□□ 1.42
CTDSP1-211ENST00000492545 KNTC1P50748 2209 aa23.93■■□□□ 1.42
CTDSP1-211ENST00000492545 POM121BA6NF01 834 aa23.92■■□□□ 1.42
CTDSP1-211ENST00000492545 NEMP2A6NFY4 417 aa23.92■■□□□ 1.42
CTDSP1-211ENST00000492545 DFFAO00273 331 aa23.92■■□□□ 1.42
CTDSP1-211ENST00000492545 RAD51BO15315 384 aa23.92■■□□□ 1.42
CTDSP1-211ENST00000492545 SPINT1O43278 529 aa23.92■■□□□ 1.42
CTDSP1-211ENST00000492545 TM7SF2O76062 418 aa23.92■■□□□ 1.42
CTDSP1-211ENST00000492545 RARAP10276 462 aa23.92■■□□□ 1.42
CTDSP1-211ENST00000492545 DGKAP23743 735 aa23.92■■□□□ 1.42
CTDSP1-211ENST00000492545 HNRNPKP61978 463 aaKnown RBP eCLIP23.92■■□□□ 1.42
CTDSP1-211ENST00000492545 ZNF211Q13398 564 aaPredicted RBP23.92■■□□□ 1.42
CTDSP1-211ENST00000492545 UGP2Q16851 508 aa23.92■■□□□ 1.42
CTDSP1-211ENST00000492545 TSR1Q2NL82 804 aaKnown RBP23.92■■□□□ 1.42
CTDSP1-211ENST00000492545 CFAP58Q5T655 872 aa23.92■■□□□ 1.42
CTDSP1-211ENST00000492545 TMCO3Q6UWJ1 677 aa23.92■■□□□ 1.42
CTDSP1-211ENST00000492545 PTAR1Q7Z6K3 402 aaPredicted RBP23.92■■□□□ 1.42
CTDSP1-211ENST00000492545 SLC22A18ASQ8N1D0 253 aa23.92■■□□□ 1.42
CTDSP1-211ENST00000492545 NPWQ8N729 165 aa23.92■■□□□ 1.42
CTDSP1-211ENST00000492545 TSC1Q92574 1164 aa23.92■■□□□ 1.42
CTDSP1-211ENST00000492545 EXOC2Q96KP1 924 aa23.92■■□□□ 1.42
CTDSP1-211ENST00000492545 CINPQ9BW66 212 aaPredicted RBP23.92■■□□□ 1.42
CTDSP1-211ENST00000492545 TSPY26PQ9H489 355 aa23.92■■□□□ 1.42
CTDSP1-211ENST00000492545 ATP13A3Q9H7F0 1226 aa23.92■■□□□ 1.42
CTDSP1-211ENST00000492545 ZNHIT6Q9NWK9 470 aaKnown RBP23.92■■□□□ 1.42
CTDSP1-211ENST00000492545 RCOR3Q9P2K3 495 aaPredicted RBP23.92■■□□□ 1.42
CTDSP1-211ENST00000492545 SEPT3Q9UH03 358 aa23.92■■□□□ 1.42
CTDSP1-211ENST00000492545 ITM2BQ9Y287 266 aa23.92■■□□□ 1.42
CTDSP1-211ENST00000492545 SPTY2D1-AS1A0A0U1RR47 76 aa23.91■■□□□ 1.42
CTDSP1-211ENST00000492545 INSIG1O15503 277 aa23.91■■□□□ 1.42
CTDSP1-211ENST00000492545 TPM1P09493 284 aa23.91■■□□□ 1.42
CTDSP1-211ENST00000492545 CKMT2P17540 419 aa23.91■■□□□ 1.42
CTDSP1-211ENST00000492545 HADHQ16836 314 aaKnown RBP23.91■■□□□ 1.42
CTDSP1-211ENST00000492545 SMTNL2Q2TAL5 461 aa23.91■■□□□ 1.42
CTDSP1-211ENST00000492545 TMEM52BQ4KMG9 183 aa23.91■■□□□ 1.42
CTDSP1-211ENST00000492545 SRLQ86TD4 932 aa23.91■■□□□ 1.42
CTDSP1-211ENST00000492545 TMPRSS12Q86WS5 348 aa23.91■■□□□ 1.42
CTDSP1-211ENST00000492545 SLC25A45Q8N413 288 aa23.91■■□□□ 1.42
CTDSP1-211ENST00000492545 NETO2Q8NC67 525 aa23.91■■□□□ 1.42
CTDSP1-211ENST00000492545 TSEN2Q8NCE0 465 aaKnown RBP23.91■■□□□ 1.42
CTDSP1-211ENST00000492545 HSPH1Q92598 858 aa23.91■■□□□ 1.42
CTDSP1-211ENST00000492545 CENPTQ96BT3 561 aa23.91■■□□□ 1.42
CTDSP1-211ENST00000492545 CSPG4P5Q96PW8 444 aa23.91■■□□□ 1.42
CTDSP1-211ENST00000492545 PSKH2Q96QS6 385 aa23.91■■□□□ 1.42
CTDSP1-211ENST00000492545 DNAJC7Q99615 494 aa23.91■■□□□ 1.42
CTDSP1-211ENST00000492545 UVRAGQ9P2Y5 699 aa23.91■■□□□ 1.42
CTDSP1-211ENST00000492545 GGT7Q9UJ14 662 aa23.91■■□□□ 1.42
CTDSP1-211ENST00000492545 NENFQ9UMX5 172 aa23.91■■□□□ 1.42
CTDSP1-211ENST00000492545 ARID1BQ8NFD5 2236 aaPredicted RBP23.91■■□□□ 1.42
CTDSP1-211ENST00000492545 RFPL3O75679 317 aa23.9■■□□□ 1.42
CTDSP1-211ENST00000492545 ALPPL2P10696 532 aa23.9■■□□□ 1.42
CTDSP1-211ENST00000492545 SERPINA4P29622 427 aa23.9■■□□□ 1.42
CTDSP1-211ENST00000492545 SERPINB6P35237 376 aa23.9■■□□□ 1.42
CTDSP1-211ENST00000492545 HSPA9P38646 679 aaKnown RBP23.9■■□□□ 1.42
CTDSP1-211ENST00000492545 EIF4A3P38919 411 aaKnown RBP23.9■■□□□ 1.42
CTDSP1-211ENST00000492545 PFN3P60673 137 aa23.9■■□□□ 1.42
CTDSP1-211ENST00000492545 YPEL5P62699 121 aa23.9■■□□□ 1.42
CTDSP1-211ENST00000492545 POLR2LP62875 67 aaKnown RBP23.9■■□□□ 1.42
CTDSP1-211ENST00000492545 SLC25A11Q02978 314 aaKnown RBP23.9■■□□□ 1.42
CTDSP1-211ENST00000492545 PTK2BQ14289 1009 aa23.9■■□□□ 1.42
CTDSP1-211ENST00000492545 SLC18A3Q16572 532 aa23.9■■□□□ 1.42
CTDSP1-211ENST00000492545 ERAP2Q6P179 960 aa23.9■■□□□ 1.42
CTDSP1-211ENST00000492545 PARGQ86W56 976 aa23.9■■□□□ 1.42
CTDSP1-211ENST00000492545 LRRC49Q8IUZ0 686 aa23.9■■□□□ 1.42
CTDSP1-211ENST00000492545 ZMIZ1Q9ULJ6 1067 aa23.9■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms