RNA–Protein interactions for RNA: ENST00000491881.1

VTA1-204, Transcript of vesicle trafficking 1, humanhuman

TSL 2

Gene VTA1, Length 528 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1-204ENST00000491881 TMEM18Q96B42 140 aa4.11□□□□□ -1.75
VTA1-204ENST00000491881 OTULINQ96BN8 352 aa4.11□□□□□ -1.75
VTA1-204ENST00000491881 ZC3HAV1LQ96H79 300 aaKnown RBP4.11□□□□□ -1.75
VTA1-204ENST00000491881 C7orf26Q96N11 449 aa4.11□□□□□ -1.75
VTA1-204ENST00000491881 BBS4Q96RK4 519 aa4.11□□□□□ -1.75
VTA1-204ENST00000491881 GFM1Q96RP9 751 aaKnown RBP4.11□□□□□ -1.75
VTA1-204ENST00000491881 HEMGNQ9BXL5 484 aa4.11□□□□□ -1.75
VTA1-204ENST00000491881 POLDIP3Q9BY77 421 aaKnown RBP4.11□□□□□ -1.75
VTA1-204ENST00000491881 EBF3Q9H4W6 596 aa4.11□□□□□ -1.75
VTA1-204ENST00000491881 CATSPERBQ9H7T0 1116 aa4.11□□□□□ -1.75
VTA1-204ENST00000491881 KRCC1Q9NPI7 259 aaPredicted RBP4.11□□□□□ -1.75
VTA1-204ENST00000491881 SIRT3Q9NTG7 399 aaPredicted RBP4.11□□□□□ -1.75
VTA1-204ENST00000491881 WWOXQ9NZC7 414 aa4.11□□□□□ -1.75
VTA1-204ENST00000491881 ORC3Q9UBD5 711 aaPredicted RBP4.11□□□□□ -1.75
VTA1-204ENST00000491881 CTNNAL1Q9UBT7 734 aa4.11□□□□□ -1.75
VTA1-204ENST00000491881 HSPB7Q9UBY9 170 aa4.11□□□□□ -1.75
VTA1-204ENST00000491881 CARD8Q9Y2G2 431 aa4.11□□□□□ -1.75
VTA1-204ENST00000491881 DDX52Q9Y2R4 599 aaKnown RBP eCLIP4.11□□□□□ -1.75
VTA1-204ENST00000491881 SQORQ9Y6N5 450 aa4.11□□□□□ -1.75
VTA1-204ENST00000491881 ADGRF5Q8IZF2 1346 aa4.11□□□□□ -1.75
VTA1-204ENST00000491881 CACNA1IQ9P0X4 2223 aa4.1□□□□□ -1.75
VTA1-204ENST00000491881 CBY3A6NI87 242 aa4.1□□□□□ -1.75
VTA1-204ENST00000491881 TMEM63AO94886 807 aa4.1□□□□□ -1.75
VTA1-204ENST00000491881 UBL4AP11441 157 aa4.1□□□□□ -1.75
VTA1-204ENST00000491881 PSG1P11464 419 aa4.1□□□□□ -1.75
VTA1-204ENST00000491881 CCKARP32238 428 aa4.1□□□□□ -1.75
VTA1-204ENST00000491881 RARSP54136 660 aaKnown RBP4.1□□□□□ -1.75
VTA1-204ENST00000491881 CAPSQ13938 189 aa4.1□□□□□ -1.75
VTA1-204ENST00000491881 PPP2R5BQ15173 497 aa4.1□□□□□ -1.75
VTA1-204ENST00000491881 HIST2H2ACQ16777 129 aaPredicted RBP4.1□□□□□ -1.75
VTA1-204ENST00000491881 PLEKHO1Q53GL0 409 aaPredicted RBP4.1□□□□□ -1.75
VTA1-204ENST00000491881 WASHC2DQ5SRD0 308 aa4.1□□□□□ -1.75
VTA1-204ENST00000491881 SLC46A3Q7Z3Q1 461 aa4.1□□□□□ -1.75
VTA1-204ENST00000491881 DIS3L2Q8IYB7 885 aaKnown RBP4.1□□□□□ -1.75
VTA1-204ENST00000491881 KIAA2013Q8IYS2 634 aa4.1□□□□□ -1.75
VTA1-204ENST00000491881 CNTROBQ8N137 903 aa4.1□□□□□ -1.75
VTA1-204ENST00000491881 C7orf57Q8NEG2 295 aa4.1□□□□□ -1.75
VTA1-204ENST00000491881 CADM4Q8NFZ8 388 aa4.1□□□□□ -1.75
VTA1-204ENST00000491881 TDRD7Q8NHU6 1098 aaKnown RBP4.1□□□□□ -1.75
VTA1-204ENST00000491881 GABPB2Q8TAK5 448 aaPredicted RBP4.1□□□□□ -1.75
VTA1-204ENST00000491881 SIN3AQ96ST3 1273 aa4.1□□□□□ -1.75
VTA1-204ENST00000491881 YME1L1Q96TA2 773 aa4.1□□□□□ -1.75
VTA1-204ENST00000491881 ISCUQ9H1K1 167 aa4.1□□□□□ -1.75
VTA1-204ENST00000491881 CDT1Q9H211 546 aa4.1□□□□□ -1.75
VTA1-204ENST00000491881 MVB12BQ9H7P6 319 aa4.1□□□□□ -1.75
VTA1-204ENST00000491881 ZBTB40Q9NUA8 1239 aa4.1□□□□□ -1.75
VTA1-204ENST00000491881 NCKIPSDQ9NZQ3 722 aa4.1□□□□□ -1.75
VTA1-204ENST00000491881 IGKV2D-30A0A075B6S6 120 aa4.09□□□□□ -1.75
VTA1-204ENST00000491881 BAIAP3O94812 1187 aa4.09□□□□□ -1.75
VTA1-204ENST00000491881 CYP1A2P05177 515 aa4.09□□□□□ -1.75
VTA1-204ENST00000491881 HEXAP06865 529 aa4.09□□□□□ -1.75
VTA1-204ENST00000491881 CHMP24386 653 aa4.09□□□□□ -1.75
VTA1-204ENST00000491881 TTKP33981 857 aa4.09□□□□□ -1.75
VTA1-204ENST00000491881 KCNJ4P48050 445 aa4.09□□□□□ -1.75
VTA1-204ENST00000491881 POLD2P49005 469 aa4.09□□□□□ -1.75
VTA1-204ENST00000491881 RASSF2P50749 326 aa4.09□□□□□ -1.75
VTA1-204ENST00000491881 HDAC4P56524 1084 aa4.09□□□□□ -1.75
VTA1-204ENST00000491881 SELENOVP59797 346 aa4.09□□□□□ -1.75
VTA1-204ENST00000491881 FAM27E3Q08E93 113 aa4.09□□□□□ -1.75
VTA1-204ENST00000491881 LMOD3Q0VAK6 560 aa4.09□□□□□ -1.75
VTA1-204ENST00000491881 DCTN2Q13561 401 aaKnown RBP4.09□□□□□ -1.75
VTA1-204ENST00000491881 KRT32Q14532 448 aa4.09□□□□□ -1.75
VTA1-204ENST00000491881 TBCEQ15813 527 aaPredicted RBP4.09□□□□□ -1.75
VTA1-204ENST00000491881 CCDC30Q5VVM6 783 aa4.09□□□□□ -1.75
VTA1-204ENST00000491881 DCAF12L2Q5VW00 463 aa4.09□□□□□ -1.75
VTA1-204ENST00000491881 CPLX2Q6PUV4 134 aaKnown RBP4.09□□□□□ -1.75
VTA1-204ENST00000491881 Q6ZTK2 550 aa4.09□□□□□ -1.75
VTA1-204ENST00000491881 CTU1Q7Z7A3 348 aaKnown RBP4.09□□□□□ -1.75
VTA1-204ENST00000491881 MCPH1Q8NEM0 835 aa4.09□□□□□ -1.75
VTA1-204ENST00000491881 ENGASEQ8NFI3 743 aa4.09□□□□□ -1.75
VTA1-204ENST00000491881 ETNPPLQ8TBG4 499 aa4.09□□□□□ -1.75
VTA1-204ENST00000491881 KCNG4Q8TDN1 519 aa4.09□□□□□ -1.75
VTA1-204ENST00000491881 INPP5DQ92835 1189 aa4.09□□□□□ -1.75
VTA1-204ENST00000491881 NR1H4Q96RI1 486 aaPredicted RBP4.09□□□□□ -1.75
VTA1-204ENST00000491881 H2AFJQ9BTM1 129 aa4.09□□□□□ -1.75
VTA1-204ENST00000491881 NPFFR1Q9GZQ6 430 aa4.09□□□□□ -1.75
VTA1-204ENST00000491881 USP44Q9H0E7 712 aa4.09□□□□□ -1.75
VTA1-204ENST00000491881 PCDHB16Q9NRJ7 776 aa4.09□□□□□ -1.75
VTA1-204ENST00000491881 KRT84Q9NSB2 600 aa4.09□□□□□ -1.75
VTA1-204ENST00000491881 PNMA2Q9UL42 364 aa4.09□□□□□ -1.75
VTA1-204ENST00000491881 FAM96BQ9Y3D0 163 aa4.09□□□□□ -1.75
VTA1-204ENST00000491881 SRPRBQ9Y5M8 271 aaKnown RBP4.09□□□□□ -1.75
VTA1-204ENST00000491881 RPS10-NUDT3A0A1W2PQS6 291 aa4.08□□□□□ -1.76
VTA1-204ENST00000491881 LRRC53A6NM62 1247 aa4.08□□□□□ -1.76
VTA1-204ENST00000491881 HSPB2A8KAH6 182 aa4.08□□□□□ -1.76
VTA1-204ENST00000491881 B4DGG1 531 aa4.08□□□□□ -1.76
VTA1-204ENST00000491881 KLRF2D3W0D1 207 aa4.08□□□□□ -1.76
VTA1-204ENST00000491881 PRR23D1E9PI22 279 aaPredicted RBP4.08□□□□□ -1.76
VTA1-204ENST00000491881 MS4A18H0YCH9 400 aa4.08□□□□□ -1.76
VTA1-204ENST00000491881 LDLRAD4O15165 306 aa4.08□□□□□ -1.76
VTA1-204ENST00000491881 SEC14L2O76054 403 aa4.08□□□□□ -1.76
VTA1-204ENST00000491881 MTA2O94776 668 aa4.08□□□□□ -1.76
VTA1-204ENST00000491881 SPARCP09486 303 aa4.08□□□□□ -1.76
VTA1-204ENST00000491881 PRR23D2P0DMB1 279 aaPredicted RBP4.08□□□□□ -1.76
VTA1-204ENST00000491881 TNFRSF1BP20333 461 aa4.08□□□□□ -1.76
VTA1-204ENST00000491881 EDN2P20800 178 aa4.08□□□□□ -1.76
VTA1-204ENST00000491881 SCP2P22307 547 aa4.08□□□□□ -1.76
VTA1-204ENST00000491881 DCTDP32321 178 aa4.08□□□□□ -1.76
VTA1-204ENST00000491881 RYKP34925 604 aa4.08□□□□□ -1.76
VTA1-204ENST00000491881 CPOXP36551 454 aa4.08□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms