RNA–Protein interactions for RNA: ENST00000491330.1

PDLIM2-217, Transcript of PDZ and LIM domain 2, humanhuman

TSL 3

Gene PDLIM2, Length 563 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-217ENST00000491330 HTR1BP28222 390 aa16.76■□□□□ 0.27
PDLIM2-217ENST00000491330 MIPP30301 263 aa16.76■□□□□ 0.27
PDLIM2-217ENST00000491330 SERPINB6P35237 376 aa16.76■□□□□ 0.27
PDLIM2-217ENST00000491330 SSR1P43307 286 aaKnown RBP16.76■□□□□ 0.27
PDLIM2-217ENST00000491330 RPIAP49247 311 aa16.76■□□□□ 0.27
PDLIM2-217ENST00000491330 PAPOLAP51003 745 aaKnown RBP16.76■□□□□ 0.27
PDLIM2-217ENST00000491330 BCL2L1Q07817 233 aa16.76■□□□□ 0.27
PDLIM2-217ENST00000491330 PDE1CQ14123 709 aaPredicted RBP16.76■□□□□ 0.27
PDLIM2-217ENST00000491330 SHBQ15464 509 aa16.76■□□□□ 0.27
PDLIM2-217ENST00000491330 GCNT7Q6ZNI0 430 aa16.76■□□□□ 0.27
PDLIM2-217ENST00000491330 OR4C6Q8NH72 309 aa16.76■□□□□ 0.27
PDLIM2-217ENST00000491330 CPLX3Q8WVH0 158 aa16.76■□□□□ 0.27
PDLIM2-217ENST00000491330 NXPE2Q96DL1 559 aa16.76■□□□□ 0.27
PDLIM2-217ENST00000491330 SNRNP25Q9BV90 132 aaKnown RBP16.76■□□□□ 0.27
PDLIM2-217ENST00000491330 MAGEB5Q9BZ81 275 aa16.76■□□□□ 0.27
PDLIM2-217ENST00000491330 SLC13A1Q9BZW2 595 aa16.76■□□□□ 0.27
PDLIM2-217ENST00000491330 ISCUQ9H1K1 167 aa16.76■□□□□ 0.27
PDLIM2-217ENST00000491330 SUV39H2Q9H5I1 410 aa16.76■□□□□ 0.27
PDLIM2-217ENST00000491330 TOR4AQ9NXH8 423 aa16.76■□□□□ 0.27
PDLIM2-217ENST00000491330 NLGN3Q9NZ94 848 aa16.76■□□□□ 0.27
PDLIM2-217ENST00000491330 IFNKQ9P0W0 207 aa16.76■□□□□ 0.27
PDLIM2-217ENST00000491330 SPASTQ9UBP0 616 aa16.76■□□□□ 0.27
PDLIM2-217ENST00000491330 ACTL7AQ9Y615 435 aa16.76■□□□□ 0.27
PDLIM2-217ENST00000491330 SPTY2D1-AS1A0A0U1RR47 76 aa16.75■□□□□ 0.27
PDLIM2-217ENST00000491330 MYO1FO00160 1098 aa16.75■□□□□ 0.27
PDLIM2-217ENST00000491330 DDX3XO00571 662 aaKnown RBP eCLIP16.75■□□□□ 0.27
PDLIM2-217ENST00000491330 FFAR2O15552 330 aa16.75■□□□□ 0.27
PDLIM2-217ENST00000491330 ATMINO43313 823 aaPredicted RBP16.75■□□□□ 0.27
PDLIM2-217ENST00000491330 LZTS3O60299 673 aaPredicted RBP16.75■□□□□ 0.27
PDLIM2-217ENST00000491330 PIAS2O75928 621 aa16.75■□□□□ 0.27
PDLIM2-217ENST00000491330 CSF2P04141 144 aa16.75■□□□□ 0.27
PDLIM2-217ENST00000491330 ERCC2P18074 760 aa16.75■□□□□ 0.27
PDLIM2-217ENST00000491330 HNRNPH3P31942 346 aaKnown RBP16.75■□□□□ 0.27
PDLIM2-217ENST00000491330 GKP32189 559 aa16.75■□□□□ 0.27
PDLIM2-217ENST00000491330 HSPA9P38646 679 aaKnown RBP16.75■□□□□ 0.27
PDLIM2-217ENST00000491330 CSNK1DP48730 415 aa16.75■□□□□ 0.27
PDLIM2-217ENST00000491330 IL10RBQ08334 325 aa16.75■□□□□ 0.27
PDLIM2-217ENST00000491330 SPECC1LQ69YQ0 1117 aa16.75■□□□□ 0.27
PDLIM2-217ENST00000491330 TMCO3Q6UWJ1 677 aa16.75■□□□□ 0.27
PDLIM2-217ENST00000491330 PROSER1Q86XN7 944 aa16.75■□□□□ 0.27
PDLIM2-217ENST00000491330 CELF6Q96J87 481 aaKnown RBP16.75■□□□□ 0.27
PDLIM2-217ENST00000491330 IL12RB2Q99665 862 aa16.75■□□□□ 0.27
PDLIM2-217ENST00000491330 LRRC19Q9H756 370 aa16.75■□□□□ 0.27
PDLIM2-217ENST00000491330 GPATCH2LQ9NWQ4 482 aa16.75■□□□□ 0.27
PDLIM2-217ENST00000491330 SEPT3Q9UH03 358 aa16.75■□□□□ 0.27
PDLIM2-217ENST00000491330 DOLKQ9UPQ8 538 aa16.75■□□□□ 0.27
PDLIM2-217ENST00000491330 NEU3Q9UQ49 428 aa16.75■□□□□ 0.27
PDLIM2-217ENST00000491330 AK5Q9Y6K8 562 aa16.75■□□□□ 0.27
PDLIM2-217ENST00000491330 CSNK1G3Q9Y6M4 447 aa16.75■□□□□ 0.27
PDLIM2-217ENST00000491330 NYNRINQ9P2P1 1898 aaKnown RBP16.75■□□□□ 0.27
PDLIM2-217ENST00000491330 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP16.74■□□□□ 0.27
PDLIM2-217ENST00000491330 TRABD2BA6NFA1 517 aa16.74■□□□□ 0.27
PDLIM2-217ENST00000491330 SCAMP1O15126 338 aa16.74■□□□□ 0.27
PDLIM2-217ENST00000491330 SIGLEC6O43699 453 aa16.74■□□□□ 0.27
PDLIM2-217ENST00000491330 MMP20O60882 483 aa16.74■□□□□ 0.27
PDLIM2-217ENST00000491330 ACP1P24666 158 aa16.74■□□□□ 0.27
PDLIM2-217ENST00000491330 ACADVLP49748 655 aa16.74■□□□□ 0.27
PDLIM2-217ENST00000491330 OGDHQ02218 1023 aa16.74■□□□□ 0.27
PDLIM2-217ENST00000491330 NSUN2Q08J23 767 aaKnown RBP eCLIP16.74■□□□□ 0.27
PDLIM2-217ENST00000491330 DNAJC3Q13217 504 aa16.74■□□□□ 0.27
PDLIM2-217ENST00000491330 KRT81Q14533 505 aa16.74■□□□□ 0.27
PDLIM2-217ENST00000491330 ZNF235Q14590 738 aa16.74■□□□□ 0.27
PDLIM2-217ENST00000491330 LRRC14Q15048 493 aa16.74■□□□□ 0.27
PDLIM2-217ENST00000491330 UGP2Q16851 508 aa16.74■□□□□ 0.27
PDLIM2-217ENST00000491330 ARTNQ5T4W7 220 aa16.74■□□□□ 0.27
PDLIM2-217ENST00000491330 SRLQ86TD4 932 aa16.74■□□□□ 0.27
PDLIM2-217ENST00000491330 NDUFAF2Q8N183 169 aa16.74■□□□□ 0.27
PDLIM2-217ENST00000491330 ZNF599Q96NL3 588 aa16.74■□□□□ 0.27
PDLIM2-217ENST00000491330 DEF6Q9H4E7 631 aa16.74■□□□□ 0.27
PDLIM2-217ENST00000491330 NOL6Q9H6R4 1146 aaKnown RBP16.74■□□□□ 0.27
PDLIM2-217ENST00000491330 KCTD5Q9NXV2 234 aa16.74■□□□□ 0.27
PDLIM2-217ENST00000491330 EPG5Q9HCE0 2579 aa16.74■□□□□ 0.27
PDLIM2-217ENST00000491330 AREL1O15033 823 aa16.73■□□□□ 0.27
PDLIM2-217ENST00000491330 LRCH4O75427 683 aa16.73■□□□□ 0.27
PDLIM2-217ENST00000491330 NEBLO76041 1014 aa16.73■□□□□ 0.27
PDLIM2-217ENST00000491330 NME1P15531 152 aaKnown RBP16.73■□□□□ 0.27
PDLIM2-217ENST00000491330 JUNDP17535 347 aa16.73■□□□□ 0.27
PDLIM2-217ENST00000491330 ABL2P42684 1182 aa16.73■□□□□ 0.27
PDLIM2-217ENST00000491330 PEX5P50542 639 aa16.73■□□□□ 0.27
PDLIM2-217ENST00000491330 AP1S1P61966 158 aa16.73■□□□□ 0.27
PDLIM2-217ENST00000491330 CYTH1Q15438 398 aa16.73■□□□□ 0.27
PDLIM2-217ENST00000491330 CCDC122Q5T0U0 273 aa16.73■□□□□ 0.27
PDLIM2-217ENST00000491330 ZFYVE27Q5T4F4 411 aa16.73■□□□□ 0.27
PDLIM2-217ENST00000491330 FAXCQ5TGI0 409 aa16.73■□□□□ 0.27
PDLIM2-217ENST00000491330 ZCCHC8Q6NZY4 707 aaKnown RBP16.73■□□□□ 0.27
PDLIM2-217ENST00000491330 LRRC49Q8IUZ0 686 aa16.73■□□□□ 0.27
PDLIM2-217ENST00000491330 MAP7D3Q8IWC1 876 aa16.73■□□□□ 0.27
PDLIM2-217ENST00000491330 CACTIN-AS1Q8N1I8 211 aa16.73■□□□□ 0.27
PDLIM2-217ENST00000491330 SLC25A45Q8N413 288 aa16.73■□□□□ 0.27
PDLIM2-217ENST00000491330 TSC1Q92574 1164 aa16.73■□□□□ 0.27
PDLIM2-217ENST00000491330 HSPH1Q92598 858 aa16.73■□□□□ 0.27
PDLIM2-217ENST00000491330 EXOC2Q96KP1 924 aa16.73■□□□□ 0.27
PDLIM2-217ENST00000491330 BMFQ96LC9 184 aa16.73■□□□□ 0.27
PDLIM2-217ENST00000491330 KCTD15Q96SI1 283 aaPredicted RBP16.73■□□□□ 0.27
PDLIM2-217ENST00000491330 XPO4Q9C0E2 1151 aaKnown RBP16.73■□□□□ 0.27
PDLIM2-217ENST00000491330 SLC39A8Q9C0K1 460 aa16.73■□□□□ 0.27
PDLIM2-217ENST00000491330 DKK4Q9UBT3 224 aa16.73■□□□□ 0.27
PDLIM2-217ENST00000491330 CLCA2Q9UQC9 943 aa16.73■□□□□ 0.27
PDLIM2-217ENST00000491330 CACNA1BQ00975 2339 aa16.73■□□□□ 0.27
PDLIM2-217ENST00000491330 CHD8Q9HCK8 2581 aa16.72■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 67.8 ms