RNA–Protein interactions for RNA: ENST00000491165.5

USF3-203, Transcript of upstream transcription factor family member 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene USF3, Length 2,133 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF3-203ENST00000491165 C7orf26Q96N11 449 aa23.06■■□□□ 1.28
USF3-203ENST00000491165 EPAS1Q99814 870 aa23.06■■□□□ 1.28
USF3-203ENST00000491165 PRDM6Q9NQX0 595 aa23.06■■□□□ 1.28
USF3-203ENST00000491165 MKS1Q9NXB0 559 aa23.06■■□□□ 1.28
USF3-203ENST00000491165 STOML1Q9UBI4 398 aa23.06■■□□□ 1.28
USF3-203ENST00000491165 IGLV3-10A0A075B6K4 115 aa23.06■■□□□ 1.28
USF3-203ENST00000491165 FAM237BA0A1B0GVD1 139 aa23.06■■□□□ 1.28
USF3-203ENST00000491165 GFRA2O00451 464 aa23.06■■□□□ 1.28
USF3-203ENST00000491165 TSPAN3O60637 253 aa23.06■■□□□ 1.28
USF3-203ENST00000491165 ERCC2P18074 760 aa23.06■■□□□ 1.28
USF3-203ENST00000491165 WEE1P30291 646 aa23.06■■□□□ 1.28
USF3-203ENST00000491165 HOXC13P31276 330 aa23.06■■□□□ 1.28
USF3-203ENST00000491165 ATG16L1Q676U5 607 aa23.06■■□□□ 1.28
USF3-203ENST00000491165 RINLQ6ZS11 566 aa23.06■■□□□ 1.28
USF3-203ENST00000491165 LGI2Q8N0V4 545 aa23.06■■□□□ 1.28
USF3-203ENST00000491165 CELF5Q8N6W0 485 aaKnown RBP23.06■■□□□ 1.28
USF3-203ENST00000491165 MCUQ8NE86 351 aa23.06■■□□□ 1.28
USF3-203ENST00000491165 HLA-CQ95604 372 aa23.06■■□□□ 1.28
USF3-203ENST00000491165 MTBPQ96DY7 904 aa23.06■■□□□ 1.28
USF3-203ENST00000491165 ASIC4Q96FT7 647 aa23.06■■□□□ 1.28
USF3-203ENST00000491165 FAM167BQ9BTA0 163 aa23.06■■□□□ 1.28
USF3-203ENST00000491165 RPP25Q9BUL9 199 aaKnown RBP23.06■■□□□ 1.28
USF3-203ENST00000491165 MMADHCQ9H3L0 296 aaPredicted RBP23.06■■□□□ 1.28
USF3-203ENST00000491165 PLAC1Q9HBJ0 212 aa23.06■■□□□ 1.28
USF3-203ENST00000491165 SDAD1Q9NVU7 687 aaKnown RBP eCLIP23.06■■□□□ 1.28
USF3-203ENST00000491165 KCNK4Q9NYG8 393 aa23.06■■□□□ 1.28
USF3-203ENST00000491165 E2F8A0AVK6 867 aa23.05■■□□□ 1.28
USF3-203ENST00000491165 DCLK1O15075 740 aa23.05■■□□□ 1.28
USF3-203ENST00000491165 KRT38O76015 456 aa23.05■■□□□ 1.28
USF3-203ENST00000491165 NCBP2-AS2Q69YL0 99 aa23.05■■□□□ 1.28
USF3-203ENST00000491165 PARM1Q6UWI2 310 aa23.05■■□□□ 1.28
USF3-203ENST00000491165 C4orf22Q6V702 233 aa23.05■■□□□ 1.28
USF3-203ENST00000491165 TTC7BQ86TV6 843 aa23.05■■□□□ 1.28
USF3-203ENST00000491165 FAM217AQ8IXS0 508 aa23.05■■□□□ 1.28
USF3-203ENST00000491165 CCDC33Q8N5R6 958 aa23.05■■□□□ 1.28
USF3-203ENST00000491165 NPWQ8N729 165 aa23.05■■□□□ 1.28
USF3-203ENST00000491165 BHMTQ93088 406 aa23.05■■□□□ 1.28
USF3-203ENST00000491165 RPRD1AQ96P16 312 aaPredicted RBP23.05■■□□□ 1.28
USF3-203ENST00000491165 PLA2G2FQ9BZM2 168 aa23.05■■□□□ 1.28
USF3-203ENST00000491165 LSM7Q9UK45 103 aaKnown RBP23.05■■□□□ 1.28
USF3-203ENST00000491165 WNT6Q9Y6F9 365 aa23.05■■□□□ 1.28
USF3-203ENST00000491165 RFPL1O75677 317 aa23.05■■□□□ 1.28
USF3-203ENST00000491165 TCF3P15923 654 aa23.05■■□□□ 1.28
USF3-203ENST00000491165 TMPRSS15P98073 1019 aa23.05■■□□□ 1.28
USF3-203ENST00000491165 TFF2Q03403 129 aa23.05■■□□□ 1.28
USF3-203ENST00000491165 CDKL3Q8IVW4 592 aaPredicted RBP23.05■■□□□ 1.28
USF3-203ENST00000491165 ARMC2Q8NEN0 867 aa23.05■■□□□ 1.28
USF3-203ENST00000491165 CCDC110Q8TBZ0 833 aa23.05■■□□□ 1.28
USF3-203ENST00000491165 E2F7Q96AV8 911 aa23.05■■□□□ 1.28
USF3-203ENST00000491165 ZFYVE19Q96K21 471 aa23.05■■□□□ 1.28
USF3-203ENST00000491165 SMYD2Q9NRG4 433 aa23.05■■□□□ 1.28
USF3-203ENST00000491165 TAS2R1Q9NYW7 299 aa23.05■■□□□ 1.28
USF3-203ENST00000491165 RCOR3Q9P2K3 495 aaPredicted RBP23.05■■□□□ 1.28
USF3-203ENST00000491165 ZNF212Q9UDV6 495 aa23.05■■□□□ 1.28
USF3-203ENST00000491165 CORO1CQ9ULV4 474 aaPredicted RBP23.05■■□□□ 1.28
USF3-203ENST00000491165 ZFP37Q9Y6Q3 630 aaPredicted RBP23.05■■□□□ 1.28
USF3-203ENST00000491165 H3BRJ5 948 aa23.04■■□□□ 1.28
USF3-203ENST00000491165 SLC10A2Q12908 348 aaPredicted RBP23.04■■□□□ 1.28
USF3-203ENST00000491165 CCDC6Q16204 474 aa23.04■■□□□ 1.28
USF3-203ENST00000491165 UNC5AQ6ZN44 842 aa23.04■■□□□ 1.28
USF3-203ENST00000491165 TFAP2DQ7Z6R9 452 aa23.04■■□□□ 1.28
USF3-203ENST00000491165 LRRN4Q8WUT4 740 aa23.04■■□□□ 1.28
USF3-203ENST00000491165 NECTIN4Q96NY8 510 aa23.04■■□□□ 1.28
USF3-203ENST00000491165 MECRQ9BV79 373 aa23.04■■□□□ 1.28
USF3-203ENST00000491165 NMUR2Q9GZQ4 415 aa23.04■■□□□ 1.28
USF3-203ENST00000491165 TRPV4Q9HBA0 871 aa23.04■■□□□ 1.28
USF3-203ENST00000491165 HEPACAM2A8MVW5 462 aa23.03■■□□□ 1.28
USF3-203ENST00000491165 ZNF487B1APH4 448 aa23.03■■□□□ 1.28
USF3-203ENST00000491165 F5H5T6 163 aa23.03■■□□□ 1.28
USF3-203ENST00000491165 ACADSP16219 412 aa23.03■■□□□ 1.28
USF3-203ENST00000491165 HCAR3P49019 387 aa23.03■■□□□ 1.28
USF3-203ENST00000491165 GBE1Q04446 702 aa23.03■■□□□ 1.28
USF3-203ENST00000491165 BST1Q10588 318 aa23.03■■□□□ 1.28
USF3-203ENST00000491165 SMAD4Q13485 552 aaKnown RBP23.03■■□□□ 1.28
USF3-203ENST00000491165 BMPR2Q13873 1038 aa23.03■■□□□ 1.28
USF3-203ENST00000491165 VITQ6UXI7 678 aa23.03■■□□□ 1.28
USF3-203ENST00000491165 TPGS1Q6ZTW0 290 aa23.03■■□□□ 1.28
USF3-203ENST00000491165 ALYREFQ86V81 257 aaKnown RBP23.03■■□□□ 1.28
USF3-203ENST00000491165 LMNTD2Q8IXW0 634 aa23.03■■□□□ 1.28
USF3-203ENST00000491165 DNAJC9Q8WXX5 260 aa23.03■■□□□ 1.28
USF3-203ENST00000491165 OSBPL1AQ9BXW6 950 aa23.03■■□□□ 1.28
USF3-203ENST00000491165 SLC13A1Q9BZW2 595 aa23.03■■□□□ 1.28
USF3-203ENST00000491165 SIRPGQ9P1W8 387 aa23.03■■□□□ 1.28
USF3-203ENST00000491165 DRGXA6NNA5 263 aa23.03■■□□□ 1.28
USF3-203ENST00000491165 LATS1O95835 1130 aa23.03■■□□□ 1.28
USF3-203ENST00000491165 MAGEA3P43357 314 aa23.03■■□□□ 1.28
USF3-203ENST00000491165 NUMBP49757 651 aa23.03■■□□□ 1.28
USF3-203ENST00000491165 KPNB1Q14974 876 aaKnown RBP23.03■■□□□ 1.28
USF3-203ENST00000491165 MUM1Q2TAK8 710 aa23.03■■□□□ 1.28
USF3-203ENST00000491165 C5orf22Q49AR2 442 aa23.03■■□□□ 1.28
USF3-203ENST00000491165 CAPRIN2Q6IMN6 1127 aaKnown RBP23.03■■□□□ 1.28
USF3-203ENST00000491165 ARHGAP24Q8N264 748 aa23.03■■□□□ 1.28
USF3-203ENST00000491165 GSDMBQ8TAX9 411 aa23.03■■□□□ 1.28
USF3-203ENST00000491165 SPDL1Q96EA4 605 aa23.03■■□□□ 1.28
USF3-203ENST00000491165 KXD1Q9BQD3 176 aa23.03■■□□□ 1.28
USF3-203ENST00000491165 PLK2Q9NYY3 685 aa23.03■■□□□ 1.28
USF3-203ENST00000491165 NYNRINQ9P2P1 1898 aaKnown RBP23.03■■□□□ 1.28
USF3-203ENST00000491165 MFSD11O43934 449 aa23.02■■□□□ 1.28
USF3-203ENST00000491165 UGT1A9O60656 530 aa23.02■■□□□ 1.28
USF3-203ENST00000491165 GCKP35557 465 aa23.02■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms