RNA–Protein interactions for RNA: ENST00000490751.1

LDB1-204, Transcript of LIM domain binding 1, humanhuman

TSL 2

Gene LDB1, Length 762 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1-204ENST00000490751 ALKBH5Q6P6C2 394 aaKnown RBP31.74■■■□□ 2.67
LDB1-204ENST00000490751 ZCCHC14Q8WYQ9 949 aaKnown RBP31.74■■■□□ 2.67
LDB1-204ENST00000490751 HSPH1Q92598 858 aa31.74■■■□□ 2.67
LDB1-204ENST00000490751 BTBD6Q96KE9 485 aa31.74■■■□□ 2.67
LDB1-204ENST00000490751 LENG8Q96PV6 779 aaPredicted RBP31.74■■■□□ 2.67
LDB1-204ENST00000490751 KLF6Q99612 283 aaPredicted RBP31.74■■■□□ 2.67
LDB1-204ENST00000490751 NUP85Q9BW27 656 aa31.74■■■□□ 2.67
LDB1-204ENST00000490751 SP110Q9HB58 689 aa31.74■■■□□ 2.67
LDB1-204ENST00000490751 ANAPC7Q9UJX3 599 aa31.74■■■□□ 2.67
LDB1-204ENST00000490751 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP31.74■■■□□ 2.678e-9■□□□□ 10.7
LDB1-204ENST00000490751 H3BRJ5 948 aa31.73■■■□□ 2.67
LDB1-204ENST00000490751 TIMP2P16035 220 aa31.73■■■□□ 2.67
LDB1-204ENST00000490751 BOLA3Q53S33 107 aa31.73■■■□□ 2.67
LDB1-204ENST00000490751 CCDC122Q5T0U0 273 aa31.73■■■□□ 2.67
LDB1-204ENST00000490751 ARHGAP36Q6ZRI8 547 aa31.73■■■□□ 2.67
LDB1-204ENST00000490751 ASB12Q8WXK4 309 aa31.73■■■□□ 2.67
LDB1-204ENST00000490751 GPR27Q9NS67 375 aa31.73■■■□□ 2.67
LDB1-204ENST00000490751 ARID1BQ8NFD5 2236 aaPredicted RBP31.73■■■□□ 2.67
LDB1-204ENST00000490751 FPGTO14772 594 aa31.72■■■□□ 2.67
LDB1-204ENST00000490751 PALMO75781 387 aa31.72■■■□□ 2.67
LDB1-204ENST00000490751 CYP1A2P05177 515 aa31.72■■■□□ 2.67
LDB1-204ENST00000490751 ITIH2P19823 946 aa31.72■■■□□ 2.67
LDB1-204ENST00000490751 ARL4AP40617 200 aa31.72■■■□□ 2.67
LDB1-204ENST00000490751 DHRS13Q6UX07 377 aa31.72■■■□□ 2.67
LDB1-204ENST00000490751 DCP2Q8IU60 420 aaKnown RBP31.72■■■□□ 2.67
LDB1-204ENST00000490751 NIPA2Q8N8Q9 360 aa31.72■■■□□ 2.67
LDB1-204ENST00000490751 STAU2Q9NUL3 570 aaKnown RBP eCLIP31.72■■■□□ 2.67
LDB1-204ENST00000490751 IP6K2Q9UHH9 426 aa31.72■■■□□ 2.67
LDB1-204ENST00000490751 PCDHGA1Q9Y5H4 931 aa31.72■■■□□ 2.67
LDB1-204ENST00000490751 ANKRD36A6QL64 1941 aa31.72■■■□□ 2.67
LDB1-204ENST00000490751 RARAP10276 462 aa31.71■■■□□ 2.67
LDB1-204ENST00000490751 XPAP23025 273 aaPredicted RBP31.71■■■□□ 2.67
LDB1-204ENST00000490751 RGRP47804 291 aa31.71■■■□□ 2.67
LDB1-204ENST00000490751 GRM3Q14832 879 aa31.71■■■□□ 2.67
LDB1-204ENST00000490751 TXNRD3NBQ6F5E7 133 aa31.71■■■□□ 2.67
LDB1-204ENST00000490751 TP53INP2Q8IXH6 220 aa31.71■■■□□ 2.67
LDB1-204ENST00000490751 GALNT15Q8N3T1 639 aa31.71■■■□□ 2.67
LDB1-204ENST00000490751 SLC25A45Q8N413 288 aa31.71■■■□□ 2.67
LDB1-204ENST00000490751 LZTR1Q8N653 840 aa31.71■■■□□ 2.67
LDB1-204ENST00000490751 TSEN2Q8NCE0 465 aaKnown RBP31.71■■■□□ 2.67
LDB1-204ENST00000490751 DENND6BQ8NEG7 585 aa31.71■■■□□ 2.67
LDB1-204ENST00000490751 CXorf40AQ8TE69 158 aa31.71■■■□□ 2.67
LDB1-204ENST00000490751 SUV39H2Q9H5I1 410 aa31.71■■■□□ 2.67
LDB1-204ENST00000490751 CAAP1Q9H8G2 361 aa31.71■■■□□ 2.67
LDB1-204ENST00000490751 MMP20O60882 483 aa31.7■■■□□ 2.67
LDB1-204ENST00000490751 DGKAP23743 735 aa31.7■■■□□ 2.67
LDB1-204ENST00000490751 RABIFP47224 123 aa31.7■■■□□ 2.67
LDB1-204ENST00000490751 IL10RBQ08334 325 aa31.7■■■□□ 2.67
LDB1-204ENST00000490751 POLNQ7Z5Q5 900 aa31.7■■■□□ 2.67
LDB1-204ENST00000490751 IFT43Q96FT9 208 aa31.7■■■□□ 2.67
LDB1-204ENST00000490751 CINPQ9BW66 212 aaPredicted RBP31.7■■■□□ 2.67
LDB1-204ENST00000490751 UCKL1Q9NWZ5 548 aa31.7■■■□□ 2.67
LDB1-204ENST00000490751 IPO11Q9UI26 975 aaKnown RBP31.7■■■□□ 2.67
LDB1-204ENST00000490751 TSPAN11A1L157 253 aa31.69■■■□□ 2.66
LDB1-204ENST00000490751 RFPL3O75679 317 aa31.69■■■□□ 2.66
LDB1-204ENST00000490751 PIAS2O75928 621 aa31.69■■■□□ 2.66
LDB1-204ENST00000490751 AMPD1P23109 780 aa31.69■■■□□ 2.66
LDB1-204ENST00000490751 HNRNPH3P31942 346 aaKnown RBP31.69■■■□□ 2.66
LDB1-204ENST00000490751 ACADVLP49748 655 aa31.69■■■□□ 2.66
LDB1-204ENST00000490751 SLC25A11Q02978 314 aaKnown RBP31.69■■■□□ 2.66
LDB1-204ENST00000490751 SMAD1Q15797 465 aaKnown RBP31.69■■■□□ 2.66
LDB1-204ENST00000490751 ZNF542PQ5EBM4 170 aa31.69■■■□□ 2.66
LDB1-204ENST00000490751 KDM7AQ6ZMT4 941 aa31.69■■■□□ 2.66
LDB1-204ENST00000490751 SRLQ86TD4 932 aa31.69■■■□□ 2.66
LDB1-204ENST00000490751 MARCH9Q86YJ5 346 aa31.69■■■□□ 2.66
LDB1-204ENST00000490751 HCAR2Q8TDS4 363 aa31.69■■■□□ 2.66
LDB1-204ENST00000490751 TEKT4Q8WW24 435 aa31.69■■■□□ 2.66
LDB1-204ENST00000490751 TSC1Q92574 1164 aa31.69■■■□□ 2.66
LDB1-204ENST00000490751 CSPG4P5Q96PW8 444 aa31.69■■■□□ 2.66
LDB1-204ENST00000490751 WRAP53Q9BUR4 548 aaKnown RBP31.69■■■□□ 2.66
LDB1-204ENST00000490751 ETNK2Q9NVF9 386 aa31.69■■■□□ 2.66
LDB1-204ENST00000490751 DNAJC28Q9NX36 388 aa31.69■■■□□ 2.66
LDB1-204ENST00000490751 NENFQ9UMX5 172 aa31.69■■■□□ 2.66
LDB1-204ENST00000490751 WDFY3Q8IZQ1 3526 aa31.69■■■□□ 2.66
LDB1-204ENST00000490751 LRRK1Q38SD2 2015 aa31.68■■■□□ 2.66
LDB1-204ENST00000490751 CBFA2T2O43439 604 aa31.68■■■□□ 2.66
LDB1-204ENST00000490751 BUB1BO60566 1050 aaPredicted RBP31.68■■■□□ 2.66
LDB1-204ENST00000490751 TM7SF2O76062 418 aa31.68■■■□□ 2.66
LDB1-204ENST00000490751 EIF4A3P38919 411 aaKnown RBP31.68■■■□□ 2.66
LDB1-204ENST00000490751 CSNK1DP48730 415 aa31.68■■■□□ 2.66
LDB1-204ENST00000490751 SUOXP51687 545 aa31.68■■■□□ 2.66
LDB1-204ENST00000490751 FZD2Q14332 565 aa31.68■■■□□ 2.66
LDB1-204ENST00000490751 RFTN1Q14699 578 aaPredicted RBP31.68■■■□□ 2.66
LDB1-204ENST00000490751 CFAP58Q5T655 872 aa31.68■■■□□ 2.66
LDB1-204ENST00000490751 CAMK1DQ8IU85 385 aa31.68■■■□□ 2.66
LDB1-204ENST00000490751 ZNF641Q96N77 438 aaPredicted RBP31.68■■■□□ 2.66
LDB1-204ENST00000490751 TUBGCP5Q96RT8 1024 aa31.68■■■□□ 2.66
LDB1-204ENST00000490751 TSPY26PQ9H489 355 aa31.68■■■□□ 2.66
LDB1-204ENST00000490751 SPTY2D1-AS1A0A0U1RR47 76 aa31.67■■■□□ 2.66
LDB1-204ENST00000490751 MYO1FO00160 1098 aa31.67■■■□□ 2.66
LDB1-204ENST00000490751 TRIM38O00635 465 aa31.67■■■□□ 2.66
LDB1-204ENST00000490751 ELP6Q0PNE2 266 aa31.67■■■□□ 2.66
LDB1-204ENST00000490751 PDE1CQ14123 709 aaPredicted RBP31.67■■■□□ 2.66
LDB1-204ENST00000490751 UGP2Q16851 508 aa31.67■■■□□ 2.66
LDB1-204ENST00000490751 PROX2Q3B8N5 592 aa31.67■■■□□ 2.66
LDB1-204ENST00000490751 TMEM52BQ4KMG9 183 aa31.67■■■□□ 2.66
LDB1-204ENST00000490751 SPECC1LQ69YQ0 1117 aa31.67■■■□□ 2.66
LDB1-204ENST00000490751 TMCO3Q6UWJ1 677 aa31.67■■■□□ 2.66
LDB1-204ENST00000490751 PARGQ86W56 976 aa31.67■■■□□ 2.66
LDB1-204ENST00000490751 CENPTQ96BT3 561 aa31.67■■■□□ 2.66
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms