RNA–Protein interactions for RNA: ENST00000490653.1

PRPF4B-208, Transcript of pre-mRNA processing factor 4B, humanhuman

TSL 2

Gene PRPF4B, Length 581 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4B-208ENST00000490653 OXCT1P55809 520 aa7.46□□□□□ -1.22
PRPF4B-208ENST00000490653 CLDN2P57739 230 aa7.46□□□□□ -1.22
PRPF4B-208ENST00000490653 KRT83P78385 493 aa7.46□□□□□ -1.22
PRPF4B-208ENST00000490653 GNA12Q03113 381 aa7.46□□□□□ -1.22
PRPF4B-208ENST00000490653 FGL2Q14314 439 aa7.46□□□□□ -1.22
PRPF4B-208ENST00000490653 CA9Q16790 459 aa7.46□□□□□ -1.22
PRPF4B-208ENST00000490653 ELOA3BQ3SY89 546 aa7.46□□□□□ -1.22
PRPF4B-208ENST00000490653 CCDC157Q569K6 752 aa7.46□□□□□ -1.22
PRPF4B-208ENST00000490653 SEL1L3Q68CR1 1132 aa7.46□□□□□ -1.22
PRPF4B-208ENST00000490653 ACAD10Q6JQN1 1059 aa7.46□□□□□ -1.22
PRPF4B-208ENST00000490653 RWDD4Q6NW29 188 aaKnown RBP7.46□□□□□ -1.22
PRPF4B-208ENST00000490653 SCYL2Q6P3W7 929 aa7.46□□□□□ -1.22
PRPF4B-208ENST00000490653 C22orf39Q6P5X5 142 aa7.46□□□□□ -1.22
PRPF4B-208ENST00000490653 CCNI2Q6ZMN8 369 aaPredicted RBP7.46□□□□□ -1.22
PRPF4B-208ENST00000490653 MON1BQ7L1V2 547 aa7.46□□□□□ -1.22
PRPF4B-208ENST00000490653 ARCQ7LC44 396 aa7.46□□□□□ -1.22
PRPF4B-208ENST00000490653 ZNF571Q7Z3V5 609 aaPredicted RBP7.46□□□□□ -1.22
PRPF4B-208ENST00000490653 ADAT2Q7Z6V5 191 aaKnown RBP7.46□□□□□ -1.22
PRPF4B-208ENST00000490653 SETD3Q86TU7 594 aaPredicted RBP7.46□□□□□ -1.22
PRPF4B-208ENST00000490653 MCOLN2Q8IZK6 566 aa7.46□□□□□ -1.22
PRPF4B-208ENST00000490653 ARFGAP1Q8N6T3 406 aa7.46□□□□□ -1.22
PRPF4B-208ENST00000490653 ELOA3Q8NG57 546 aa7.46□□□□□ -1.22
PRPF4B-208ENST00000490653 OR6K2Q8NGY2 324 aa7.46□□□□□ -1.22
PRPF4B-208ENST00000490653 GRIN3AQ8TCU5 1115 aa7.46□□□□□ -1.22
PRPF4B-208ENST00000490653 ARHGEF2Q92974 986 aaKnown RBP7.46□□□□□ -1.22
PRPF4B-208ENST00000490653 SERAC1Q96JX3 654 aa7.46□□□□□ -1.22
PRPF4B-208ENST00000490653 SELENOOQ9BVL4 669 aa7.46□□□□□ -1.22
PRPF4B-208ENST00000490653 ATP13A1Q9HD20 1204 aa7.46□□□□□ -1.22
PRPF4B-208ENST00000490653 PPARGC1AQ9UBK2 798 aaKnown RBP7.46□□□□□ -1.22
PRPF4B-208ENST00000490653 OR12D3Q9UGF7 316 aa7.46□□□□□ -1.22
PRPF4B-208ENST00000490653 FZD4Q9ULV1 537 aa7.46□□□□□ -1.22
PRPF4B-208ENST00000490653 HS3ST2Q9Y278 367 aa7.46□□□□□ -1.22
PRPF4B-208ENST00000490653 RAXQ9Y2V3 346 aa7.46□□□□□ -1.22
PRPF4B-208ENST00000490653 PTPRBP23467 1997 aa7.46□□□□□ -1.22
PRPF4B-208ENST00000490653 TP53BP1Q12888 1972 aaPredicted RBP7.46□□□□□ -1.22
PRPF4B-208ENST00000490653 ADAMTS20P59510 1910 aa7.45□□□□□ -1.22
PRPF4B-208ENST00000490653 A0A1W2PQU0 124 aa7.45□□□□□ -1.22
PRPF4B-208ENST00000490653 FAM149AA5PLN7 773 aa7.45□□□□□ -1.22
PRPF4B-208ENST00000490653 LRRC53A6NM62 1247 aa7.45□□□□□ -1.22
PRPF4B-208ENST00000490653 GOLGA6L22H0YM25 854 aa7.45□□□□□ -1.22
PRPF4B-208ENST00000490653 TLR4O00206 839 aa7.45□□□□□ -1.22
PRPF4B-208ENST00000490653 DDX3XO00571 662 aaKnown RBP eCLIP7.45□□□□□ -1.22
PRPF4B-208ENST00000490653 INSIG1O15503 277 aa7.45□□□□□ -1.22
PRPF4B-208ENST00000490653 LATO43561 262 aa7.45□□□□□ -1.22
PRPF4B-208ENST00000490653 CER1O95813 267 aa7.45□□□□□ -1.22
PRPF4B-208ENST00000490653 MBD3O95983 291 aa7.45□□□□□ -1.22
PRPF4B-208ENST00000490653 PRB1P04280 392 aa7.45□□□□□ -1.22
PRPF4B-208ENST00000490653 TPM2P07951 284 aa7.45□□□□□ -1.22
PRPF4B-208ENST00000490653 ZNF883P0CG24 379 aa7.45□□□□□ -1.22
PRPF4B-208ENST00000490653 MYF5P13349 255 aa7.45□□□□□ -1.22
PRPF4B-208ENST00000490653 SDC4P31431 198 aa7.45□□□□□ -1.22
PRPF4B-208ENST00000490653 PTPN9P43378 593 aa7.45□□□□□ -1.22
PRPF4B-208ENST00000490653 NSFP46459 744 aaKnown RBP7.45□□□□□ -1.22
PRPF4B-208ENST00000490653 C21orf59P57076 290 aa7.45□□□□□ -1.22
PRPF4B-208ENST00000490653 DNAJC3Q13217 504 aa7.45□□□□□ -1.22
PRPF4B-208ENST00000490653 NR1I3Q14994 352 aa7.45□□□□□ -1.22
PRPF4B-208ENST00000490653 TEAD4Q15561 434 aa7.45□□□□□ -1.22
PRPF4B-208ENST00000490653 CARD16Q5EG05 197 aa7.45□□□□□ -1.22
PRPF4B-208ENST00000490653 ATXN7L2Q5T6C5 722 aaPredicted RBP7.45□□□□□ -1.22
PRPF4B-208ENST00000490653 FAM46CQ5VWP2 391 aa7.45□□□□□ -1.22
PRPF4B-208ENST00000490653 IL27RAQ6UWB1 636 aa7.45□□□□□ -1.22
PRPF4B-208ENST00000490653 TRIM72Q6ZMU5 477 aa7.45□□□□□ -1.22
PRPF4B-208ENST00000490653 STRADAQ7RTN6 431 aa7.45□□□□□ -1.22
PRPF4B-208ENST00000490653 PRPF39Q86UA1 669 aaKnown RBP7.45□□□□□ -1.22
PRPF4B-208ENST00000490653 TP53INP2Q8IXH6 220 aa7.45□□□□□ -1.22
PRPF4B-208ENST00000490653 DCAF4L2Q8NA75 395 aa7.45□□□□□ -1.22
PRPF4B-208ENST00000490653 PLPP7Q8NBV4 271 aa7.45□□□□□ -1.22
PRPF4B-208ENST00000490653 ADAMTS14Q8WXS8 1223 aa7.45□□□□□ -1.22
PRPF4B-208ENST00000490653 COL26A1Q96A83 441 aa7.45□□□□□ -1.22
PRPF4B-208ENST00000490653 MCEEQ96PE7 176 aa7.45□□□□□ -1.22
PRPF4B-208ENST00000490653 PPP1R9BQ96SB3 815 aa7.45□□□□□ -1.22
PRPF4B-208ENST00000490653 ELF4Q99607 663 aaPredicted RBP7.45□□□□□ -1.22
PRPF4B-208ENST00000490653 TM6SF2Q9BZW4 377 aa7.45□□□□□ -1.22
PRPF4B-208ENST00000490653 HAUS4Q9H6D7 363 aa7.45□□□□□ -1.22
PRPF4B-208ENST00000490653 GGT7Q9UJ14 662 aa7.45□□□□□ -1.22
PRPF4B-208ENST00000490653 FZD10Q9ULW2 581 aa7.45□□□□□ -1.22
PRPF4B-208ENST00000490653 PCDHGB2Q9Y5G2 931 aa7.45□□□□□ -1.22
PRPF4B-208ENST00000490653 CHD5Q8TDI0 1954 aa7.45□□□□□ -1.22
PRPF4B-208ENST00000490653 GOLGA4Q13439 2230 aaKnown RBP7.45□□□□□ -1.22
PRPF4B-208ENST00000490653 TENM4Q6N022 2769 aa7.45□□□□□ -1.22
PRPF4B-208ENST00000490653 TRPM6Q9BX84 2022 aa7.44□□□□□ -1.22
PRPF4B-208ENST00000490653 C1QTNF3-AMACRE9PGA6 284 aa7.44□□□□□ -1.22
PRPF4B-208ENST00000490653 RAD51BO15315 384 aa7.44□□□□□ -1.22
PRPF4B-208ENST00000490653 KDELR3O43731 214 aa7.44□□□□□ -1.22
PRPF4B-208ENST00000490653 CREB3O43889 395 aa7.44□□□□□ -1.22
PRPF4B-208ENST00000490653 SDC3O75056 442 aa7.44□□□□□ -1.22
PRPF4B-208ENST00000490653 PCDH8O95206 1070 aa7.44□□□□□ -1.22
PRPF4B-208ENST00000490653 PAK4O96013 591 aaPredicted RBP7.44□□□□□ -1.22
PRPF4B-208ENST00000490653 CALB1P05937 261 aa7.44□□□□□ -1.22
PRPF4B-208ENST00000490653 FERP16591 822 aa7.44□□□□□ -1.22
PRPF4B-208ENST00000490653 ABL2P42684 1182 aa7.44□□□□□ -1.22
PRPF4B-208ENST00000490653 SERPINH1P50454 418 aaKnown RBP7.44□□□□□ -1.22
PRPF4B-208ENST00000490653 CCT8P50990 548 aa7.44□□□□□ -1.22
PRPF4B-208ENST00000490653 CCNHP51946 323 aaPredicted RBP7.44□□□□□ -1.22
PRPF4B-208ENST00000490653 ZNF143P52747 638 aaPredicted RBP7.44□□□□□ -1.22
PRPF4B-208ENST00000490653 GSCP56915 257 aaPredicted RBP7.44□□□□□ -1.22
PRPF4B-208ENST00000490653 NXPH1P58417 271 aa7.44□□□□□ -1.22
PRPF4B-208ENST00000490653 NRG1Q02297 640 aaPredicted RBP7.44□□□□□ -1.22
PRPF4B-208ENST00000490653 SEMG2Q02383 582 aa7.44□□□□□ -1.22
PRPF4B-208ENST00000490653 SFSWAPQ12872 951 aaKnown RBP7.44□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms