RNA–Protein interactions for RNA: ENST00000490475.1

TTC28-207, Transcript of tetratricopeptide repeat domain 28, humanhuman

TSL 5

Gene TTC28, Length 724 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-207ENST00000490475 SCAMP1O15126 338 aa10.52□□□□□ -0.73
TTC28-207ENST00000490475 SIGLEC6O43699 453 aa10.52□□□□□ -0.73
TTC28-207ENST00000490475 RAMP2O60895 175 aa10.52□□□□□ -0.73
TTC28-207ENST00000490475 PRLRP16471 622 aa10.52□□□□□ -0.73
TTC28-207ENST00000490475 HTR7P34969 479 aa10.52□□□□□ -0.73
TTC28-207ENST00000490475 YBEYP58557 167 aaPredicted RBP10.52□□□□□ -0.73
TTC28-207ENST00000490475 INO80DQ53TQ3 878 aaPredicted RBP10.52□□□□□ -0.73
TTC28-207ENST00000490475 FAM72AQ5TYM5 149 aa10.52□□□□□ -0.73
TTC28-207ENST00000490475 FAM72DQ6L9T8 149 aa10.52□□□□□ -0.73
TTC28-207ENST00000490475 SCYL2Q6P3W7 929 aa10.52□□□□□ -0.73
TTC28-207ENST00000490475 Q6ZSR6 202 aa10.52□□□□□ -0.73
TTC28-207ENST00000490475 PTAR1Q7Z6K3 402 aaPredicted RBP10.52□□□□□ -0.73
TTC28-207ENST00000490475 MTERF4Q7Z6M4 381 aaKnown RBP10.52□□□□□ -0.73
TTC28-207ENST00000490475 PARGQ86W56 976 aa10.52□□□□□ -0.73
TTC28-207ENST00000490475 FAM72BQ86X60 149 aa10.52□□□□□ -0.73
TTC28-207ENST00000490475 ARFGAP1Q8N6T3 406 aa10.52□□□□□ -0.73
TTC28-207ENST00000490475 CCDC185Q8N715 623 aa10.52□□□□□ -0.73
TTC28-207ENST00000490475 CHST14Q8NCH0 376 aa10.52□□□□□ -0.73
TTC28-207ENST00000490475 LSM14AQ8ND56 463 aaKnown RBP10.52□□□□□ -0.73
TTC28-207ENST00000490475 OR13H1Q8NG92 308 aa10.52□□□□□ -0.73
TTC28-207ENST00000490475 OR2AP1Q8NGE2 309 aa10.52□□□□□ -0.73
TTC28-207ENST00000490475 TPCN2Q8NHX9 752 aa10.52□□□□□ -0.73
TTC28-207ENST00000490475 SNIP1Q8TAD8 396 aaKnown RBP10.52□□□□□ -0.73
TTC28-207ENST00000490475 WDR48Q8TAF3 677 aa10.52□□□□□ -0.73
TTC28-207ENST00000490475 FGF11Q92914 225 aa10.52□□□□□ -0.73
TTC28-207ENST00000490475 GLMNQ92990 594 aa10.52□□□□□ -0.73
TTC28-207ENST00000490475 MRFAP1L1Q96HT8 127 aa10.52□□□□□ -0.73
TTC28-207ENST00000490475 TBATAQ96M53 351 aa10.52□□□□□ -0.73
TTC28-207ENST00000490475 DEPDC7Q96QD5 511 aa10.52□□□□□ -0.73
TTC28-207ENST00000490475 THAP2Q9H0W7 228 aa10.52□□□□□ -0.73
TTC28-207ENST00000490475 ABCG4Q9H172 646 aa10.52□□□□□ -0.73
TTC28-207ENST00000490475 TNKS2Q9H2K2 1166 aa10.52□□□□□ -0.73
TTC28-207ENST00000490475 ZDHHC6Q9H6R6 413 aa10.52□□□□□ -0.73
TTC28-207ENST00000490475 CATSPERBQ9H7T0 1116 aa10.52□□□□□ -0.73
TTC28-207ENST00000490475 HECAQ9UBI9 543 aaPredicted RBP10.52□□□□□ -0.73
TTC28-207ENST00000490475 RALYQ9UKM9 306 aaKnown RBP10.52□□□□□ -0.73
TTC28-207ENST00000490475 NENFQ9UMX5 172 aa10.52□□□□□ -0.73
TTC28-207ENST00000490475 FADS3Q9Y5Q0 445 aa10.52□□□□□ -0.73
TTC28-207ENST00000490475 IGSF10Q6WRI0 2623 aa10.51□□□□□ -0.73
TTC28-207ENST00000490475 SPTY2D1-AS1A0A0U1RR47 76 aa10.51□□□□□ -0.73
TTC28-207ENST00000490475 EIF3CLB5ME19 914 aaKnown RBP10.51□□□□□ -0.73
TTC28-207ENST00000490475 TK2O00142 265 aa10.51□□□□□ -0.73
TTC28-207ENST00000490475 TPP1O14773 563 aa10.51□□□□□ -0.73
TTC28-207ENST00000490475 SDC3O75056 442 aa10.51□□□□□ -0.73
TTC28-207ENST00000490475 MT-CO3P00414 261 aa10.51□□□□□ -0.73
TTC28-207ENST00000490475 CSF2P04141 144 aa10.51□□□□□ -0.73
TTC28-207ENST00000490475 MYBL1P10243 752 aa10.51□□□□□ -0.73
TTC28-207ENST00000490475 NME1P15531 152 aaKnown RBP10.51□□□□□ -0.73
TTC28-207ENST00000490475 PSMA2P25787 234 aa10.51□□□□□ -0.73
TTC28-207ENST00000490475 EIF2S3P41091 472 aaKnown RBP10.51□□□□□ -0.73
TTC28-207ENST00000490475 RPIAP49247 311 aa10.51□□□□□ -0.73
TTC28-207ENST00000490475 YPEL5P62699 121 aa10.51□□□□□ -0.73
TTC28-207ENST00000490475 ARF5P84085 180 aa10.51□□□□□ -0.73
TTC28-207ENST00000490475 MAPK8IP2Q13387 824 aaPredicted RBP10.51□□□□□ -0.73
TTC28-207ENST00000490475 EFHC2Q5JST6 749 aa10.51□□□□□ -0.73
TTC28-207ENST00000490475 MANEALQ5VSG8 457 aa10.51□□□□□ -0.73
TTC28-207ENST00000490475 ZCCHC8Q6NZY4 707 aaKnown RBP10.51□□□□□ -0.73
TTC28-207ENST00000490475 GCNT7Q6ZNI0 430 aa10.51□□□□□ -0.73
TTC28-207ENST00000490475 SLFN11Q7Z7L1 901 aa10.51□□□□□ -0.73
TTC28-207ENST00000490475 NLRP14Q86W24 1093 aa10.51□□□□□ -0.73
TTC28-207ENST00000490475 CNGA4Q8IV77 575 aa10.51□□□□□ -0.73
TTC28-207ENST00000490475 PYROXD2Q8N2H3 581 aa10.51□□□□□ -0.73
TTC28-207ENST00000490475 SLC25A45Q8N413 288 aa10.51□□□□□ -0.73
TTC28-207ENST00000490475 RYBPQ8N488 228 aaPredicted RBP10.51□□□□□ -0.73
TTC28-207ENST00000490475 TC2NQ8N9U0 490 aa10.51□□□□□ -0.73
TTC28-207ENST00000490475 HCAR2Q8TDS4 363 aa10.51□□□□□ -0.73
TTC28-207ENST00000490475 ARHGEF2Q92974 986 aaKnown RBP10.51□□□□□ -0.73
TTC28-207ENST00000490475 TRIM11Q96F44 468 aa10.51□□□□□ -0.73
TTC28-207ENST00000490475 GDAP1L1Q96MZ0 367 aa10.51□□□□□ -0.73
TTC28-207ENST00000490475 UBL7Q96S82 380 aaPredicted RBP10.51□□□□□ -0.73
TTC28-207ENST00000490475 EIF3CQ99613 913 aaKnown RBP10.51□□□□□ -0.73
TTC28-207ENST00000490475 EPAS1Q99814 870 aa10.51□□□□□ -0.73
TTC28-207ENST00000490475 C1QTNF2Q9BXJ5 285 aa10.51□□□□□ -0.73
TTC28-207ENST00000490475 PACSIN1Q9BY11 444 aa10.51□□□□□ -0.73
TTC28-207ENST00000490475 NHEJ1Q9H9Q4 299 aaPredicted RBP10.51□□□□□ -0.73
TTC28-207ENST00000490475 GPR27Q9NS67 375 aa10.51□□□□□ -0.73
TTC28-207ENST00000490475 DNAJC28Q9NX36 388 aa10.51□□□□□ -0.73
TTC28-207ENST00000490475 PCSK1NQ9UHG2 260 aa10.51□□□□□ -0.73
TTC28-207ENST00000490475 ZFR2Q9UPR6 939 aaKnown RBP10.51□□□□□ -0.73
TTC28-207ENST00000490475 SSU72P8A0A1W2PR75 194 aa10.5□□□□□ -0.73
TTC28-207ENST00000490475 C16orf96A6NNT2 1141 aa10.5□□□□□ -0.73
TTC28-207ENST00000490475 TMEM110-MUSTN1A8MSY1 372 aa10.5□□□□□ -0.73
TTC28-207ENST00000490475 KRIT1O00522 736 aa10.5□□□□□ -0.73
TTC28-207ENST00000490475 TRIM38O00635 465 aa10.5□□□□□ -0.73
TTC28-207ENST00000490475 FGF10O15520 208 aaPredicted RBP10.5□□□□□ -0.73
TTC28-207ENST00000490475 KDELR3O43731 214 aa10.5□□□□□ -0.73
TTC28-207ENST00000490475 AKR1B10O60218 316 aa10.5□□□□□ -0.73
TTC28-207ENST00000490475 ZNF821O75541 412 aaPredicted RBP10.5□□□□□ -0.73
TTC28-207ENST00000490475 LRIG2O94898 1065 aa10.5□□□□□ -0.73
TTC28-207ENST00000490475 IGSF6O95976 241 aa10.5□□□□□ -0.73
TTC28-207ENST00000490475 PAK4O96013 591 aaPredicted RBP10.5□□□□□ -0.73
TTC28-207ENST00000490475 CYP1A2P05177 515 aa10.5□□□□□ -0.73
TTC28-207ENST00000490475 BLKP51451 505 aa10.5□□□□□ -0.73
TTC28-207ENST00000490475 THOP1P52888 689 aa10.5□□□□□ -0.73
TTC28-207ENST00000490475 UCNP55089 124 aa10.5□□□□□ -0.73
TTC28-207ENST00000490475 INSM1Q01101 510 aaPredicted RBP10.5□□□□□ -0.73
TTC28-207ENST00000490475 SEMG2Q02383 582 aa10.5□□□□□ -0.73
TTC28-207ENST00000490475 ELP6Q0PNE2 266 aa10.5□□□□□ -0.73
TTC28-207ENST00000490475 COL9A2Q14055 689 aaPredicted RBP10.5□□□□□ -0.73
TTC28-207ENST00000490475 SLC18A3Q16572 532 aa10.5□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms