RNA–Protein interactions for RNA: ENST00000490417.6

SFXN4-208, Transcript of sideroflexin 4, human

TSL 2

Gene SFXN4, Length 952 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SFXN4-208	ENST00000490417	PRAMEF11	O60813	436 aa		13.77	□□□□□ -0.21
SFXN4-208	ENST00000490417	CD160	O95971	181 aa		13.77	□□□□□ -0.21
SFXN4-208	ENST00000490417	UGT2B4	P06133	528 aa		13.77	□□□□□ -0.21
SFXN4-208	ENST00000490417	ITGAV	P06756	1048 aa		13.77	□□□□□ -0.21
SFXN4-208	ENST00000490417	HSPA9	P38646	679 aa	Known RBP	13.77	□□□□□ -0.21
SFXN4-208	ENST00000490417	PAPOLA	P51003	745 aa	Known RBP	13.77	□□□□□ -0.21
SFXN4-208	ENST00000490417	METAP1	P53582	386 aa		13.77	□□□□□ -0.21
SFXN4-208	ENST00000490417	POLR2L	P62875	67 aa	Known RBP	13.77	□□□□□ -0.21
SFXN4-208	ENST00000490417	SHC2	P98077	582 aa		13.77	□□□□□ -0.21
SFXN4-208	ENST00000490417	IL10RB	Q08334	325 aa		13.77	□□□□□ -0.21
SFXN4-208	ENST00000490417	NSUN2	Q08J23	767 aa	Known RBP eCLIP	13.77	□□□□□ -0.21
SFXN4-208	ENST00000490417	ODF2	Q5BJF6	829 aa		13.77	□□□□□ -0.21
SFXN4-208	ENST00000490417	KCNT1	Q5JUK3	1230 aa		13.77	□□□□□ -0.21
SFXN4-208	ENST00000490417	ZFYVE27	Q5T4F4	411 aa		13.77	□□□□□ -0.21
SFXN4-208	ENST00000490417	ERAP2	Q6P179	960 aa		13.77	□□□□□ -0.21
SFXN4-208	ENST00000490417	SARM1	Q6SZW1	724 aa		13.77	□□□□□ -0.21
SFXN4-208	ENST00000490417	LEKR1	Q6ZMV7	388 aa		13.77	□□□□□ -0.21
SFXN4-208	ENST00000490417	RHOT2	Q8IXI1	618 aa		13.77	□□□□□ -0.21
SFXN4-208	ENST00000490417	ARFGAP1	Q8N6T3	406 aa		13.77	□□□□□ -0.21
SFXN4-208	ENST00000490417	CXorf40A	Q8TE69	158 aa		13.77	□□□□□ -0.21
SFXN4-208	ENST00000490417	CELF6	Q96J87	481 aa	Known RBP	13.77	□□□□□ -0.21
SFXN4-208	ENST00000490417	ZNF641	Q96N77	438 aa	Predicted RBP	13.77	□□□□□ -0.21
SFXN4-208	ENST00000490417	KLHL32	Q96NJ5	620 aa		13.77	□□□□□ -0.21
SFXN4-208	ENST00000490417	PEBP4	Q96S96	227 aa		13.77	□□□□□ -0.21
SFXN4-208	ENST00000490417	SLC17A9	Q9BYT1	436 aa		13.77	□□□□□ -0.21
SFXN4-208	ENST00000490417	TRIM7	Q9C029	511 aa		13.77	□□□□□ -0.21
SFXN4-208	ENST00000490417	NOL6	Q9H6R4	1146 aa	Known RBP	13.77	□□□□□ -0.21
SFXN4-208	ENST00000490417	ATP13A3	Q9H7F0	1226 aa		13.77	□□□□□ -0.21
SFXN4-208	ENST00000490417	CWC15	Q9P013	229 aa	Known RBP	13.77	□□□□□ -0.21
SFXN4-208	ENST00000490417	DKK3	Q9UBP4	350 aa		13.77	□□□□□ -0.21
SFXN4-208	ENST00000490417	FNDC3A	Q9Y2H6	1198 aa	Known RBP	13.77	□□□□□ -0.21
SFXN4-208	ENST00000490417	PCDH15	Q96QU1	1955 aa		13.76	□□□□□ -0.21
SFXN4-208	ENST00000490417		A0A1B0GTQ1	180 aa		13.76	□□□□□ -0.21
SFXN4-208	ENST00000490417		A0A1W2PQ67	120 aa		13.76	□□□□□ -0.21
SFXN4-208	ENST00000490417		A0A1W2PR77	199 aa		13.76	□□□□□ -0.21
SFXN4-208	ENST00000490417	GIPC1	O14908	333 aa		13.76	□□□□□ -0.21
SFXN4-208	ENST00000490417	MFAP3L	O75121	409 aa		13.76	□□□□□ -0.21
SFXN4-208	ENST00000490417	TMEM253	P0C7T8	217 aa		13.76	□□□□□ -0.21
SFXN4-208	ENST00000490417	RARA	P10276	462 aa		13.76	□□□□□ -0.21
SFXN4-208	ENST00000490417	CDK4	P11802	303 aa		13.76	□□□□□ -0.21
SFXN4-208	ENST00000490417	PML	P29590	882 aa		13.76	□□□□□ -0.21
SFXN4-208	ENST00000490417	SERPINA4	P29622	427 aa		13.76	□□□□□ -0.21
SFXN4-208	ENST00000490417	ARHGAP25	P42331	645 aa		13.76	□□□□□ -0.21
SFXN4-208	ENST00000490417	CSNK1D	P48730	415 aa		13.76	□□□□□ -0.21
SFXN4-208	ENST00000490417	NXPH1	P58417	271 aa		13.76	□□□□□ -0.21
SFXN4-208	ENST00000490417	TAS2R38	P59533	333 aa		13.76	□□□□□ -0.21
SFXN4-208	ENST00000490417	FOXC1	Q12948	553 aa		13.76	□□□□□ -0.21
SFXN4-208	ENST00000490417	PDK2	Q15119	407 aa		13.76	□□□□□ -0.21
SFXN4-208	ENST00000490417	CA9	Q16790	459 aa		13.76	□□□□□ -0.21
SFXN4-208	ENST00000490417	SMTNL2	Q2TAL5	461 aa		13.76	□□□□□ -0.21
SFXN4-208	ENST00000490417	BRAT1	Q6PJG6	821 aa		13.76	□□□□□ -0.21
SFXN4-208	ENST00000490417	DBX2	Q6ZNG2	339 aa		13.76	□□□□□ -0.21
SFXN4-208	ENST00000490417	POLN	Q7Z5Q5	900 aa		13.76	□□□□□ -0.21
SFXN4-208	ENST00000490417	KCTD6	Q8NC69	237 aa		13.76	□□□□□ -0.21
SFXN4-208	ENST00000490417	OR6K2	Q8NGY2	324 aa		13.76	□□□□□ -0.21
SFXN4-208	ENST00000490417	ASB12	Q8WXK4	309 aa		13.76	□□□□□ -0.21
SFXN4-208	ENST00000490417	SLC39A8	Q9C0K1	460 aa		13.76	□□□□□ -0.21
SFXN4-208	ENST00000490417	NHEJ1	Q9H9Q4	299 aa	Predicted RBP	13.76	□□□□□ -0.21
SFXN4-208	ENST00000490417	EBF2	Q9HAK2	575 aa		13.76	□□□□□ -0.21
SFXN4-208	ENST00000490417	SEPT3	Q9UH03	358 aa		13.76	□□□□□ -0.21
SFXN4-208	ENST00000490417	IPO11	Q9UI26	975 aa	Known RBP	13.76	□□□□□ -0.21
SFXN4-208	ENST00000490417	PCOLCE2	Q9UKZ9	415 aa		13.76	□□□□□ -0.21
SFXN4-208	ENST00000490417	FADS3	Q9Y5Q0	445 aa		13.76	□□□□□ -0.21
SFXN4-208	ENST00000490417	KNL1	Q8NG31	2342 aa		13.76	□□□□□ -0.21
SFXN4-208	ENST00000490417		A6NNZ2	444 aa		13.75	□□□□□ -0.21
SFXN4-208	ENST00000490417	C10orf142	B7Z368	130 aa		13.75	□□□□□ -0.21
SFXN4-208	ENST00000490417		H0Y8X5	98 aa		13.75	□□□□□ -0.21
SFXN4-208	ENST00000490417	TOR1B	O14657	336 aa		13.75	□□□□□ -0.21
SFXN4-208	ENST00000490417	FPGT	O14772	594 aa		13.75	□□□□□ -0.21
SFXN4-208	ENST00000490417	THEGL	P0DJG4	465 aa		13.75	□□□□□ -0.21
SFXN4-208	ENST00000490417	MAN1A1	P33908	653 aa		13.75	□□□□□ -0.21
SFXN4-208	ENST00000490417	RXRG	P48443	463 aa		13.75	□□□□□ -0.21
SFXN4-208	ENST00000490417	ADK	P55263	362 aa	Known RBP	13.75	□□□□□ -0.21
SFXN4-208	ENST00000490417	CDH6	P55285	790 aa		13.75	□□□□□ -0.21
SFXN4-208	ENST00000490417	BNC1	Q01954	994 aa		13.75	□□□□□ -0.21
SFXN4-208	ENST00000490417	DPYS	Q14117	519 aa		13.75	□□□□□ -0.21
SFXN4-208	ENST00000490417	ZNF235	Q14590	738 aa		13.75	□□□□□ -0.21
SFXN4-208	ENST00000490417	ZNF284	Q2VY69	593 aa		13.75	□□□□□ -0.21
SFXN4-208	ENST00000490417	ATXN7L2	Q5T6C5	722 aa	Predicted RBP	13.75	□□□□□ -0.21
SFXN4-208	ENST00000490417	PARS2	Q7L3T8	475 aa	Known RBP	13.75	□□□□□ -0.21
SFXN4-208	ENST00000490417	GLRX5	Q86SX6	157 aa		13.75	□□□□□ -0.21
SFXN4-208	ENST00000490417	ATPAF2	Q8N5M1	289 aa		13.75	□□□□□ -0.21
SFXN4-208	ENST00000490417	LENG8	Q96PV6	779 aa	Predicted RBP	13.75	□□□□□ -0.21
SFXN4-208	ENST00000490417	CSPG4P5	Q96PW8	444 aa		13.75	□□□□□ -0.21
SFXN4-208	ENST00000490417	SUV39H2	Q9H5I1	410 aa		13.75	□□□□□ -0.21
SFXN4-208	ENST00000490417	IL21R	Q9HBE5	538 aa		13.75	□□□□□ -0.21
SFXN4-208	ENST00000490417	INTU	Q9ULD6	942 aa		13.75	□□□□□ -0.21
SFXN4-208	ENST00000490417	ACTL7A	Q9Y615	435 aa		13.75	□□□□□ -0.21
SFXN4-208	ENST00000490417	PCNX2	A6NKB5	2137 aa		13.75	□□□□□ -0.21
SFXN4-208	ENST00000490417	ADAMTS9	Q9P2N4	1935 aa		13.74	□□□□□ -0.21
SFXN4-208	ENST00000490417	LOC107983988	A0A1B0GUW6	1196 aa	Predicted RBP	13.74	□□□□□ -0.21
SFXN4-208	ENST00000490417	SPAAR	A0A1B0GVQ0	90 aa		13.74	□□□□□ -0.21
SFXN4-208	ENST00000490417		J3KR12	359 aa		13.74	□□□□□ -0.21
SFXN4-208	ENST00000490417	TNFSF14	O43557	240 aa		13.74	□□□□□ -0.21
SFXN4-208	ENST00000490417	NEBL	O76041	1014 aa		13.74	□□□□□ -0.21
SFXN4-208	ENST00000490417	TM7SF2	O76062	418 aa		13.74	□□□□□ -0.21
SFXN4-208	ENST00000490417	DXO	O77932	396 aa	Known RBP	13.74	□□□□□ -0.21
SFXN4-208	ENST00000490417	PROSC	O94903	275 aa		13.74	□□□□□ -0.21
SFXN4-208	ENST00000490417	IPO7	O95373	1038 aa	Known RBP	13.74	□□□□□ -0.21
SFXN4-208	ENST00000490417	PAK4	O96013	591 aa	Predicted RBP	13.74	□□□□□ -0.21

Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms