RNA–Protein interactions for RNA: ENST00000490192.1

TM9SF3-206, Transcript of transmembrane 9 superfamily member 3, humanhuman

TSL 4

Gene TM9SF3, Length 884 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF3-206ENST00000490192 ZNF20P17024 532 aa6.72□□□□□ -1.33
TM9SF3-206ENST00000490192 TMEM11P17152 192 aa6.72□□□□□ -1.33
TM9SF3-206ENST00000490192 PON1P27169 355 aa6.72□□□□□ -1.33
TM9SF3-206ENST00000490192 HOXA13P31271 388 aaPredicted RBP6.72□□□□□ -1.33
TM9SF3-206ENST00000490192 MMP14P50281 582 aa6.72□□□□□ -1.33
TM9SF3-206ENST00000490192 ARSFP54793 590 aa6.72□□□□□ -1.33
TM9SF3-206ENST00000490192 RHAGQ02094 409 aa6.72□□□□□ -1.33
TM9SF3-206ENST00000490192 GUCY1B3Q02153 619 aa6.72□□□□□ -1.33
TM9SF3-206ENST00000490192 HIST2H2ACQ16777 129 aaPredicted RBP6.72□□□□□ -1.33
TM9SF3-206ENST00000490192 ME3Q16798 604 aa6.72□□□□□ -1.33
TM9SF3-206ENST00000490192 C15orf59Q2T9L4 293 aaPredicted RBP6.72□□□□□ -1.33
TM9SF3-206ENST00000490192 IGSF11Q5DX21 431 aa6.72□□□□□ -1.33
TM9SF3-206ENST00000490192 PLAC9Q5JTB6 97 aa6.72□□□□□ -1.33
TM9SF3-206ENST00000490192 LAIR1Q6GTX8 287 aa6.72□□□□□ -1.33
TM9SF3-206ENST00000490192 CAVIN1Q6NZI2 390 aaKnown RBP6.72□□□□□ -1.33
TM9SF3-206ENST00000490192 PET117Q6UWS5 81 aa6.72□□□□□ -1.33
TM9SF3-206ENST00000490192 KLBQ86Z14 1044 aa6.72□□□□□ -1.33
TM9SF3-206ENST00000490192 EPHX4Q8IUS5 362 aa6.72□□□□□ -1.33
TM9SF3-206ENST00000490192 DHX40Q8IX18 779 aaKnown RBP6.72□□□□□ -1.33
TM9SF3-206ENST00000490192 KIF18AQ8NI77 898 aa6.72□□□□□ -1.33
TM9SF3-206ENST00000490192 IP6K1Q92551 441 aa6.72□□□□□ -1.33
TM9SF3-206ENST00000490192 ARHGEF26Q96DR7 871 aa6.72□□□□□ -1.33
TM9SF3-206ENST00000490192 OR2A14Q96R47 310 aa6.72□□□□□ -1.33
TM9SF3-206ENST00000490192 ZNF347Q96SE7 839 aa6.72□□□□□ -1.33
TM9SF3-206ENST00000490192 CDK5RAP1Q96SZ6 601 aaKnown RBP6.72□□□□□ -1.33
TM9SF3-206ENST00000490192 KIFC3Q9BVG8 833 aa6.72□□□□□ -1.33
TM9SF3-206ENST00000490192 C1QTNF3Q9BXJ4 246 aa6.72□□□□□ -1.33
TM9SF3-206ENST00000490192 HRH4Q9H3N8 390 aa6.72□□□□□ -1.33
TM9SF3-206ENST00000490192 OSGEPL1Q9H4B0 414 aa6.72□□□□□ -1.33
TM9SF3-206ENST00000490192 GPRASP1Q5JY77 1395 aa6.71□□□□□ -1.33
TM9SF3-206ENST00000490192 NPIPB11E5RHQ5 1161 aa6.71□□□□□ -1.34
TM9SF3-206ENST00000490192 H0YIZ8 118 aa6.71□□□□□ -1.34
TM9SF3-206ENST00000490192 PEX1O43933 1283 aa6.71□□□□□ -1.34
TM9SF3-206ENST00000490192 TFP02787 698 aa6.71□□□□□ -1.34
TM9SF3-206ENST00000490192 ENO1P06733 434 aaKnown RBP6.71□□□□□ -1.34
TM9SF3-206ENST00000490192 TNFRSF1AP19438 455 aa6.71□□□□□ -1.34
TM9SF3-206ENST00000490192 TRIM21P19474 475 aaKnown RBP6.71□□□□□ -1.34
TM9SF3-206ENST00000490192 NR4A1P22736 598 aa6.71□□□□□ -1.34
TM9SF3-206ENST00000490192 PTAFRP25105 342 aa6.71□□□□□ -1.34
TM9SF3-206ENST00000490192 GRAPQ13588 217 aa6.71□□□□□ -1.34
TM9SF3-206ENST00000490192 ALCAMQ13740 583 aa6.71□□□□□ -1.34
TM9SF3-206ENST00000490192 ANXA2RQ3ZCQ2 193 aa6.71□□□□□ -1.34
TM9SF3-206ENST00000490192 CRY2Q49AN0 593 aa6.71□□□□□ -1.34
TM9SF3-206ENST00000490192 ODF2Q5BJF6 829 aa6.71□□□□□ -1.34
TM9SF3-206ENST00000490192 CXorf66Q5JRM2 361 aaPredicted RBP6.71□□□□□ -1.34
TM9SF3-206ENST00000490192 SPDYAQ5MJ70 313 aa6.71□□□□□ -1.34
TM9SF3-206ENST00000490192 C11orf88Q6PI97 169 aa6.71□□□□□ -1.34
TM9SF3-206ENST00000490192 DHRS13Q6UX07 377 aa6.71□□□□□ -1.34
TM9SF3-206ENST00000490192 CFAP77Q6ZQR2 320 aa6.71□□□□□ -1.34
TM9SF3-206ENST00000490192 TMCO5AQ8N6Q1 288 aa6.71□□□□□ -1.34
TM9SF3-206ENST00000490192 TMEM217Q8N7C4 229 aa6.71□□□□□ -1.34
TM9SF3-206ENST00000490192 CELF1Q92879 486 aaKnown RBP6.71□□□□□ -1.34
TM9SF3-206ENST00000490192 MYEOVQ96EZ4 313 aa6.71□□□□□ -1.34
TM9SF3-206ENST00000490192 BBS4Q96RK4 519 aa6.71□□□□□ -1.34
TM9SF3-206ENST00000490192 AIFM2Q9BRQ8 373 aa6.71□□□□□ -1.34
TM9SF3-206ENST00000490192 NAA11Q9BSU3 229 aaPredicted RBP6.71□□□□□ -1.34
TM9SF3-206ENST00000490192 IFT27Q9BW83 186 aa6.71□□□□□ -1.34
TM9SF3-206ENST00000490192 SSBP3Q9BWW4 388 aaPredicted RBP6.71□□□□□ -1.34
TM9SF3-206ENST00000490192 PLEKHA4Q9H4M7 779 aa6.71□□□□□ -1.34
TM9SF3-206ENST00000490192 TRPV4Q9HBA0 871 aa6.71□□□□□ -1.34
TM9SF3-206ENST00000490192 PFDN4Q9NQP4 134 aa6.71□□□□□ -1.34
TM9SF3-206ENST00000490192 SERTAD4Q9NUC0 356 aa6.71□□□□□ -1.34
TM9SF3-206ENST00000490192 AAR2Q9Y312 384 aaKnown RBP6.71□□□□□ -1.34
TM9SF3-206ENST00000490192 TMEM247A6NEH6 219 aa6.7□□□□□ -1.34
TM9SF3-206ENST00000490192 CBY3A6NI87 242 aa6.7□□□□□ -1.34
TM9SF3-206ENST00000490192 TMEM200CA6NKL6 621 aa6.7□□□□□ -1.34
TM9SF3-206ENST00000490192 MPPED1O15442 326 aa6.7□□□□□ -1.34
TM9SF3-206ENST00000490192 SEC14L5O43304 696 aa6.7□□□□□ -1.34
TM9SF3-206ENST00000490192 HCRTR2O43614 444 aa6.7□□□□□ -1.34
TM9SF3-206ENST00000490192 MITFO75030 526 aaPredicted RBP6.7□□□□□ -1.34
TM9SF3-206ENST00000490192 AVILO75366 819 aa6.7□□□□□ -1.34
TM9SF3-206ENST00000490192 DDAH2O95865 285 aa6.7□□□□□ -1.34
TM9SF3-206ENST00000490192 ITGAMP11215 1152 aa6.7□□□□□ -1.34
TM9SF3-206ENST00000490192 FDPSP14324 419 aaKnown RBP6.7□□□□□ -1.34
TM9SF3-206ENST00000490192 NDUFB7P17568 137 aa6.7□□□□□ -1.34
TM9SF3-206ENST00000490192 LAG3P18627 525 aa6.7□□□□□ -1.34
TM9SF3-206ENST00000490192 HNF4AP41235 474 aa6.7□□□□□ -1.34
TM9SF3-206ENST00000490192 PNLIPRP2P54317 469 aa6.7□□□□□ -1.34
TM9SF3-206ENST00000490192 EEFSECP57772 596 aaKnown RBP6.7□□□□□ -1.34
TM9SF3-206ENST00000490192 MRPS5P82675 430 aaKnown RBP6.7□□□□□ -1.34
TM9SF3-206ENST00000490192 C5orf22Q49AR2 442 aa6.7□□□□□ -1.34
TM9SF3-206ENST00000490192 CPLX2Q6PUV4 134 aaKnown RBP6.7□□□□□ -1.34
TM9SF3-206ENST00000490192 SUSD1Q6UWL2 747 aa6.7□□□□□ -1.34
TM9SF3-206ENST00000490192 RANBP10Q6VN20 620 aa6.7□□□□□ -1.34
TM9SF3-206ENST00000490192 RAPH1Q70E73 1250 aa6.7□□□□□ -1.34
TM9SF3-206ENST00000490192 AACSQ86V21 672 aa6.7□□□□□ -1.34
TM9SF3-206ENST00000490192 FAM185AQ8N0U4 392 aa6.7□□□□□ -1.34
TM9SF3-206ENST00000490192 ASB10Q8WXI3 467 aa6.7□□□□□ -1.34
TM9SF3-206ENST00000490192 SGCDQ92629 289 aa6.7□□□□□ -1.34
TM9SF3-206ENST00000490192 ZNF622Q969S3 477 aaKnown RBP eCLIP6.7□□□□□ -1.34
TM9SF3-206ENST00000490192 TEFMQ96QE5 360 aaKnown RBP6.7□□□□□ -1.34
TM9SF3-206ENST00000490192 GAD1Q99259 594 aa6.7□□□□□ -1.34
TM9SF3-206ENST00000490192 FRMD8Q9BZ67 464 aaPredicted RBP6.7□□□□□ -1.34
TM9SF3-206ENST00000490192 FAM129AQ9BZQ8 928 aa6.7□□□□□ -1.34
TM9SF3-206ENST00000490192 CIPCQ9C0C6 399 aa6.7□□□□□ -1.34
TM9SF3-206ENST00000490192 TMPRSS5Q9H3S3 457 aa6.7□□□□□ -1.34
TM9SF3-206ENST00000490192 COPS7BQ9H9Q2 264 aaPredicted RBP6.7□□□□□ -1.34
TM9SF3-206ENST00000490192 GRHL1Q9NZI5 618 aa6.7□□□□□ -1.34
TM9SF3-206ENST00000490192 FBXO40Q9UH90 709 aa6.7□□□□□ -1.34
TM9SF3-206ENST00000490192 FAM96BQ9Y3D0 163 aa6.7□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms