RNA–Protein interactions for RNA: ENST00000489719.1

ABCF3-217, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 4

Gene ABCF3, Length 569 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-217ENST00000489719 ABI3BPQ7Z7G0 1075 aa18.04■□□□□ 0.48
ABCF3-217ENST00000489719 EID2Q8N6I1 236 aa18.04■□□□□ 0.48
ABCF3-217ENST00000489719 NPWQ8N729 165 aa18.04■□□□□ 0.48
ABCF3-217ENST00000489719 PAF1Q8N7H5 531 aa18.04■□□□□ 0.48
ABCF3-217ENST00000489719 TSEN2Q8NCE0 465 aaKnown RBP18.04■□□□□ 0.48
ABCF3-217ENST00000489719 OR13H1Q8NG92 308 aa18.04■□□□□ 0.48
ABCF3-217ENST00000489719 CXorf40AQ8TE69 158 aa18.04■□□□□ 0.48
ABCF3-217ENST00000489719 ASB12Q8WXK4 309 aa18.04■□□□□ 0.48
ABCF3-217ENST00000489719 BMFQ96LC9 184 aa18.04■□□□□ 0.48
ABCF3-217ENST00000489719 CSPG4P5Q96PW8 444 aa18.04■□□□□ 0.48
ABCF3-217ENST00000489719 TUBGCP5Q96RT8 1024 aa18.04■□□□□ 0.48
ABCF3-217ENST00000489719 LCMT1Q9UIC8 334 aa18.04■□□□□ 0.48
ABCF3-217ENST00000489719 ITM2BQ9Y287 266 aa18.04■□□□□ 0.48
ABCF3-217ENST00000489719 MSRB2Q9Y3D2 182 aa18.04■□□□□ 0.48
ABCF3-217ENST00000489719 KNL1Q8NG31 2342 aa18.03■□□□□ 0.48
ABCF3-217ENST00000489719 AREL1O15033 823 aa18.03■□□□□ 0.48
ABCF3-217ENST00000489719 MMP20O60882 483 aa18.03■□□□□ 0.48
ABCF3-217ENST00000489719 TM7SF2O76062 418 aa18.03■□□□□ 0.48
ABCF3-217ENST00000489719 PIGNO95427 931 aa18.03■□□□□ 0.48
ABCF3-217ENST00000489719 ADKP55263 362 aaKnown RBP18.03■□□□□ 0.48
ABCF3-217ENST00000489719 CDH6P55285 790 aa18.03■□□□□ 0.48
ABCF3-217ENST00000489719 ELP6Q0PNE2 266 aa18.03■□□□□ 0.48
ABCF3-217ENST00000489719 CCDC157Q569K6 752 aa18.03■□□□□ 0.48
ABCF3-217ENST00000489719 TXNRD3NBQ6F5E7 133 aa18.03■□□□□ 0.48
ABCF3-217ENST00000489719 GCNT7Q6ZNI0 430 aa18.03■□□□□ 0.48
ABCF3-217ENST00000489719 ARHGAP36Q6ZRI8 547 aa18.03■□□□□ 0.48
ABCF3-217ENST00000489719 PTAR1Q7Z6K3 402 aaPredicted RBP18.03■□□□□ 0.48
ABCF3-217ENST00000489719 KCTD6Q8NC69 237 aa18.03■□□□□ 0.48
ABCF3-217ENST00000489719 NSMCE1Q8WV22 266 aa18.03■□□□□ 0.48
ABCF3-217ENST00000489719 VOPP1Q96AW1 172 aa18.03■□□□□ 0.48
ABCF3-217ENST00000489719 ZNF599Q96NL3 588 aa18.03■□□□□ 0.48
ABCF3-217ENST00000489719 C1QTNF7Q9BXJ2 289 aa18.03■□□□□ 0.48
ABCF3-217ENST00000489719 ATP13A3Q9H7F0 1226 aa18.03■□□□□ 0.48
ABCF3-217ENST00000489719 PCDH18Q9HCL0 1135 aa18.03■□□□□ 0.48
ABCF3-217ENST00000489719 ABHD10Q9NUJ1 306 aa18.03■□□□□ 0.48
ABCF3-217ENST00000489719 SEPT3Q9UH03 358 aa18.03■□□□□ 0.48
ABCF3-217ENST00000489719 GGT7Q9UJ14 662 aa18.03■□□□□ 0.48
ABCF3-217ENST00000489719 KLK13Q9UKR3 277 aa18.03■□□□□ 0.48
ABCF3-217ENST00000489719 NENFQ9UMX5 172 aa18.03■□□□□ 0.48
ABCF3-217ENST00000489719 RAD51BO15315 384 aa18.02■□□□□ 0.48
ABCF3-217ENST00000489719 BUB1BO60566 1050 aaPredicted RBP18.02■□□□□ 0.48
ABCF3-217ENST00000489719 PROSCO94903 275 aa18.02■□□□□ 0.48
ABCF3-217ENST00000489719 ITIH2P19823 946 aa18.02■□□□□ 0.48
ABCF3-217ENST00000489719 SERPINA4P29622 427 aa18.02■□□□□ 0.48
ABCF3-217ENST00000489719 SERPINB6P35237 376 aa18.02■□□□□ 0.48
ABCF3-217ENST00000489719 RABIFP47224 123 aa18.02■□□□□ 0.48
ABCF3-217ENST00000489719 SCNN1BP51168 640 aa18.02■□□□□ 0.48
ABCF3-217ENST00000489719 SLC25A11Q02978 314 aaKnown RBP18.02■□□□□ 0.48
ABCF3-217ENST00000489719 LBRQ14739 615 aaKnown RBP18.02■□□□□ 0.48
ABCF3-217ENST00000489719 UGP2Q16851 508 aa18.02■□□□□ 0.48
ABCF3-217ENST00000489719 ASTE1Q2TB18 679 aaPredicted RBP18.02■□□□□ 0.48
ABCF3-217ENST00000489719 HS1BP3Q53T59 392 aa18.02■□□□□ 0.48
ABCF3-217ENST00000489719 LRRC73Q5JTD7 316 aa18.02■□□□□ 0.48
ABCF3-217ENST00000489719 TMCO4Q5TGY1 634 aa18.02■□□□□ 0.48
ABCF3-217ENST00000489719 ERAP2Q6P179 960 aa18.02■□□□□ 0.48
ABCF3-217ENST00000489719 BRAT1Q6PJG6 821 aa18.02■□□□□ 0.48
ABCF3-217ENST00000489719 CAMK1DQ8IU85 385 aa18.02■□□□□ 0.48
ABCF3-217ENST00000489719 MAP7D3Q8IWC1 876 aa18.02■□□□□ 0.48
ABCF3-217ENST00000489719 TP53INP2Q8IXH6 220 aa18.02■□□□□ 0.48
ABCF3-217ENST00000489719 BBS5Q8N3I7 341 aa18.02■□□□□ 0.48
ABCF3-217ENST00000489719 CNDP2Q96KP4 475 aaKnown RBP18.02■□□□□ 0.48
ABCF3-217ENST00000489719 CHP1Q99653 195 aa18.02■□□□□ 0.48
ABCF3-217ENST00000489719 TRIM5Q9C035 493 aa18.02■□□□□ 0.48
ABCF3-217ENST00000489719 NHEJ1Q9H9Q4 299 aaPredicted RBP18.02■□□□□ 0.48
ABCF3-217ENST00000489719 ETNK2Q9NVF9 386 aa18.02■□□□□ 0.48
ABCF3-217ENST00000489719 RCOR3Q9P2K3 495 aaPredicted RBP18.02■□□□□ 0.48
ABCF3-217ENST00000489719 FAM221BA6H8Z2 402 aa18.01■□□□□ 0.47
ABCF3-217ENST00000489719 POM121BA6NF01 834 aa18.01■□□□□ 0.47
ABCF3-217ENST00000489719 AKR1B15C9JRZ8 316 aaPredicted RBP18.01■□□□□ 0.47
ABCF3-217ENST00000489719 ENC1O14682 589 aa18.01■□□□□ 0.47
ABCF3-217ENST00000489719 SDC3O75056 442 aa18.01■□□□□ 0.47
ABCF3-217ENST00000489719 MFAP3LO75121 409 aa18.01■□□□□ 0.47
ABCF3-217ENST00000489719 PROS1P07225 676 aa18.01■□□□□ 0.47
ABCF3-217ENST00000489719 TMEM253P0C7T8 217 aa18.01■□□□□ 0.47
ABCF3-217ENST00000489719 GJC1P36383 396 aa18.01■□□□□ 0.47
ABCF3-217ENST00000489719 POLR2LP62875 67 aaKnown RBP18.01■□□□□ 0.47
ABCF3-217ENST00000489719 BCL2L1Q07817 233 aa18.01■□□□□ 0.47
ABCF3-217ENST00000489719 ST3GAL2Q16842 350 aa18.01■□□□□ 0.47
ABCF3-217ENST00000489719 TMEM52BQ4KMG9 183 aa18.01■□□□□ 0.47
ABCF3-217ENST00000489719 ZFYVE27Q5T4F4 411 aa18.01■□□□□ 0.47
ABCF3-217ENST00000489719 UNQ6494/PRO21346Q6UXR6 183 aa18.01■□□□□ 0.47
ABCF3-217ENST00000489719 KYAT3Q6YP21 454 aaKnown RBP18.01■□□□□ 0.47
ABCF3-217ENST00000489719 CNGA4Q8IV77 575 aa18.01■□□□□ 0.47
ABCF3-217ENST00000489719 DENND6BQ8NEG7 585 aa18.01■□□□□ 0.47
ABCF3-217ENST00000489719 IFT43Q96FT9 208 aa18.01■□□□□ 0.47
ABCF3-217ENST00000489719 KLF6Q99612 283 aaPredicted RBP18.01■□□□□ 0.47
ABCF3-217ENST00000489719 WRAP53Q9BUR4 548 aaKnown RBP18.01■□□□□ 0.47
ABCF3-217ENST00000489719 PACSIN1Q9BY11 444 aa18.01■□□□□ 0.47
ABCF3-217ENST00000489719 C1QTNF9BB2RNN3 333 aa18■□□□□ 0.47
ABCF3-217ENST00000489719 KRT7P08729 469 aa18■□□□□ 0.47
ABCF3-217ENST00000489719 C1QTNF9P0C862 333 aa18■□□□□ 0.47
ABCF3-217ENST00000489719 RGRP47804 291 aa18■□□□□ 0.47
ABCF3-217ENST00000489719 SLC10A7Q0GE19 358 aa18■□□□□ 0.47
ABCF3-217ENST00000489719 ZNF235Q14590 738 aa18■□□□□ 0.47
ABCF3-217ENST00000489719 PDK2Q15119 407 aa18■□□□□ 0.47
ABCF3-217ENST00000489719 ATP13A4Q4VNC1 1196 aa18■□□□□ 0.47
ABCF3-217ENST00000489719 LRRC49Q8IUZ0 686 aa18■□□□□ 0.47
ABCF3-217ENST00000489719 ATPAF2Q8N5M1 289 aa18■□□□□ 0.47
ABCF3-217ENST00000489719 TSC1Q92574 1164 aa18■□□□□ 0.47
ABCF3-217ENST00000489719 CENPTQ96BT3 561 aa18■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms